RNA–Protein interactions for RNA: ENST00000462553.2

CDC42BPA-210, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 430 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-210ENST00000462553 SCN5AQ14524 2016 aa9.46□□□□□ -0.89
CDC42BPA-210ENST00000462553 GSG1L2A8MUP6 293 aa9.46□□□□□ -0.9
CDC42BPA-210ENST00000462553 M0R2C6 588 aa9.46□□□□□ -0.9
CDC42BPA-210ENST00000462553 PQBP1O60828 265 aaKnown RBP9.46□□□□□ -0.9
CDC42BPA-210ENST00000462553 COPB2P35606 906 aa9.46□□□□□ -0.9
CDC42BPA-210ENST00000462553 ACLYP53396 1101 aa9.46□□□□□ -0.9
CDC42BPA-210ENST00000462553 IRX5P78411 483 aaPredicted RBP9.46□□□□□ -0.9
CDC42BPA-210ENST00000462553 FAAP100Q0VG06 881 aa9.46□□□□□ -0.9
CDC42BPA-210ENST00000462553 SBK1Q52WX2 424 aa9.46□□□□□ -0.9
CDC42BPA-210ENST00000462553 SNRNP48Q6IEG0 339 aaKnown RBP9.46□□□□□ -0.9
CDC42BPA-210ENST00000462553 B4GALNT3Q6L9W6 998 aa9.46□□□□□ -0.9
CDC42BPA-210ENST00000462553 MAMDC4Q6UXC1 1216 aa9.46□□□□□ -0.9
CDC42BPA-210ENST00000462553 ANKRD33Q7Z3H0 272 aa9.46□□□□□ -0.9
CDC42BPA-210ENST00000462553 CHD1LQ86WJ1 897 aa9.46□□□□□ -0.9
CDC42BPA-210ENST00000462553 AMOTL1Q8IY63 956 aa9.46□□□□□ -0.9
CDC42BPA-210ENST00000462553 MSL3Q8N5Y2 521 aaKnown RBP9.46□□□□□ -0.9
CDC42BPA-210ENST00000462553 KLHDC9Q8NEP7 349 aa9.46□□□□□ -0.9
CDC42BPA-210ENST00000462553 APPBP2Q92624 585 aa9.46□□□□□ -0.9
CDC42BPA-210ENST00000462553 STRBPQ96SI9 672 aaKnown RBP9.46□□□□□ -0.9
CDC42BPA-210ENST00000462553 TEX13BQ9BXU2 312 aa9.46□□□□□ -0.9
CDC42BPA-210ENST00000462553 TBX21Q9UL17 535 aa9.46□□□□□ -0.9
CDC42BPA-210ENST00000462553 TACC3Q9Y6A5 838 aa9.46□□□□□ -0.9
CDC42BPA-210ENST00000462553 TANC1Q9C0D5 1861 aa9.46□□□□□ -0.9
CDC42BPA-210ENST00000462553 TMEM265A0A087WTH1 108 aa9.45□□□□□ -0.9
CDC42BPA-210ENST00000462553 ATP2A1O14983 1001 aa9.45□□□□□ -0.9
CDC42BPA-210ENST00000462553 RNF113AO15541 343 aaKnown RBP9.45□□□□□ -0.9
CDC42BPA-210ENST00000462553 PDE4AP27815 886 aa9.45□□□□□ -0.9
CDC42BPA-210ENST00000462553 CST5P28325 142 aaPredicted RBP9.45□□□□□ -0.9
CDC42BPA-210ENST00000462553 ZSCAN25Q6NSZ9 544 aa9.45□□□□□ -0.9
CDC42BPA-210ENST00000462553 PLEKHM2Q8IWE5 1019 aa9.45□□□□□ -0.9
CDC42BPA-210ENST00000462553 KIF12Q96FN5 646 aa9.45□□□□□ -0.9
CDC42BPA-210ENST00000462553 RNPC3Q96LT9 517 aaKnown RBP9.45□□□□□ -0.9
CDC42BPA-210ENST00000462553 TOX2Q96NM4 488 aa9.45□□□□□ -0.9
CDC42BPA-210ENST00000462553 TSEN34Q9BSV6 310 aaKnown RBP9.45□□□□□ -0.9
CDC42BPA-210ENST00000462553 KATNBL1Q9H079 304 aa9.45□□□□□ -0.9
CDC42BPA-210ENST00000462553 OSBPL3Q9H4L5 887 aa9.45□□□□□ -0.9
CDC42BPA-210ENST00000462553 SLC38A10Q9HBR0 1119 aa9.45□□□□□ -0.9
CDC42BPA-210ENST00000462553 NYAP2Q9P242 653 aa9.45□□□□□ -0.9
CDC42BPA-210ENST00000462553 PTPRSQ13332 1948 aa9.44□□□□□ -0.9
CDC42BPA-210ENST00000462553 MOXD2PA6NHM9 499 aa9.44□□□□□ -0.9
CDC42BPA-210ENST00000462553 F5H6K3 240 aa9.44□□□□□ -0.9
CDC42BPA-210ENST00000462553 CTAGE5O15320 804 aa9.44□□□□□ -0.9
CDC42BPA-210ENST00000462553 FOXP2O15409 715 aa9.44□□□□□ -0.9
CDC42BPA-210ENST00000462553 GPAA1O43292 621 aa9.44□□□□□ -0.9
CDC42BPA-210ENST00000462553 RAD21O60216 631 aa9.44□□□□□ -0.9
CDC42BPA-210ENST00000462553 ZFYP08048 801 aaPredicted RBP9.44□□□□□ -0.9
CDC42BPA-210ENST00000462553 FOSL2P15408 326 aa9.44□□□□□ -0.9
CDC42BPA-210ENST00000462553 RAG1P15918 1043 aa9.44□□□□□ -0.9
CDC42BPA-210ENST00000462553 FPGSQ05932 587 aa9.44□□□□□ -0.9
CDC42BPA-210ENST00000462553 KLRC3Q07444 240 aa9.44□□□□□ -0.9
CDC42BPA-210ENST00000462553 ZMYM1Q5SVZ6 1142 aa9.44□□□□□ -0.9
CDC42BPA-210ENST00000462553 GIMAP6Q6P9H5 292 aa9.44□□□□□ -0.9
CDC42BPA-210ENST00000462553 ZNF467Q7Z7K2 595 aaPredicted RBP9.44□□□□□ -0.9
CDC42BPA-210ENST00000462553 STK11IPQ8N1F8 1099 aa9.44□□□□□ -0.9
CDC42BPA-210ENST00000462553 USP38Q8NB14 1042 aa9.44□□□□□ -0.9
CDC42BPA-210ENST00000462553 DDRGK1Q96HY6 314 aa9.44□□□□□ -0.9
CDC42BPA-210ENST00000462553 SEC62Q99442 399 aaKnown RBP9.44□□□□□ -0.9
CDC42BPA-210ENST00000462553 FSD1Q9BTV5 496 aa9.44□□□□□ -0.9
CDC42BPA-210ENST00000462553 UPF3AQ9H1J1 476 aaKnown RBP9.44□□□□□ -0.9
CDC42BPA-210ENST00000462553 STARD7Q9NQZ5 370 aa9.44□□□□□ -0.9
CDC42BPA-210ENST00000462553 TMEM39AQ9NV64 488 aa9.44□□□□□ -0.9
CDC42BPA-210ENST00000462553 ZHX1Q9UKY1 873 aaPredicted RBP9.44□□□□□ -0.9
CDC42BPA-210ENST00000462553 CNPY2Q9Y2B0 182 aa9.44□□□□□ -0.9
CDC42BPA-210ENST00000462553 SCN10AQ9Y5Y9 1956 aa9.44□□□□□ -0.9
CDC42BPA-210ENST00000462553 BRWD1Q9NSI6 2320 aa9.44□□□□□ -0.9
CDC42BPA-210ENST00000462553 TET1Q8NFU7 2136 aa9.43□□□□□ -0.9
CDC42BPA-210ENST00000462553 MYH6P13533 1939 aa9.43□□□□□ -0.9
CDC42BPA-210ENST00000462553 ASTN1O14525 1302 aa9.43□□□□□ -0.9
CDC42BPA-210ENST00000462553 DUSP11O75319 330 aaKnown RBP9.43□□□□□ -0.9
CDC42BPA-210ENST00000462553 PRDM1O75626 825 aa9.43□□□□□ -0.9
CDC42BPA-210ENST00000462553 DNAJB2P25686 324 aa9.43□□□□□ -0.9
CDC42BPA-210ENST00000462553 TIE1P35590 1138 aa9.43□□□□□ -0.9
CDC42BPA-210ENST00000462553 CDK7P50613 346 aa9.43□□□□□ -0.9
CDC42BPA-210ENST00000462553 GRIN2CQ14957 1233 aa9.43□□□□□ -0.9
CDC42BPA-210ENST00000462553 KCNA10Q16322 511 aa9.43□□□□□ -0.9
CDC42BPA-210ENST00000462553 RASIP1Q5U651 963 aa9.43□□□□□ -0.9
CDC42BPA-210ENST00000462553 C16orf59Q7L2K0 433 aa9.43□□□□□ -0.9
CDC42BPA-210ENST00000462553 LRRC47Q8N1G4 583 aaKnown RBP9.43□□□□□ -0.9
CDC42BPA-210ENST00000462553 PRPF38AQ8NAV1 312 aaKnown RBP9.43□□□□□ -0.9
CDC42BPA-210ENST00000462553 MKL1Q969V6 931 aa9.43□□□□□ -0.9
CDC42BPA-210ENST00000462553 CEP95Q96GE4 821 aa9.43□□□□□ -0.9
CDC42BPA-210ENST00000462553 BUD13Q9BRD0 619 aaKnown RBP eCLIP9.43□□□□□ -0.9
CDC42BPA-210ENST00000462553 RAVER2Q9HCJ3 691 aaKnown RBP9.43□□□□□ -0.9
CDC42BPA-210ENST00000462553 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.43□□□□□ -0.9
CDC42BPA-210ENST00000462553 MTMR4Q9NYA4 1195 aa9.43□□□□□ -0.9
CDC42BPA-210ENST00000462553 ZBTB47Q9UFB7 747 aaPredicted RBP9.43□□□□□ -0.9
CDC42BPA-210ENST00000462553 FAM184BQ9ULE4 1060 aa9.43□□□□□ -0.9
CDC42BPA-210ENST00000462553 PRRC2BQ5JSZ5 2229 aaKnown RBP9.42□□□□□ -0.9
CDC42BPA-210ENST00000462553 ZNF536O15090 1300 aa9.42□□□□□ -0.9
CDC42BPA-210ENST00000462553 ELP1O95163 1332 aa9.42□□□□□ -0.9
CDC42BPA-210ENST00000462553 MINDY4BA8MYZ0 360 aa9.42□□□□□ -0.9
CDC42BPA-210ENST00000462553 SEC24BO95487 1268 aa9.42□□□□□ -0.9
CDC42BPA-210ENST00000462553 TIMP1P01033 207 aa9.42□□□□□ -0.9
CDC42BPA-210ENST00000462553 ASGR1P07306 291 aa9.42□□□□□ -0.9
CDC42BPA-210ENST00000462553 OAZ1P54368 228 aa9.42□□□□□ -0.9
CDC42BPA-210ENST00000462553 GJA9P57773 515 aa9.42□□□□□ -0.9
CDC42BPA-210ENST00000462553 NKX3-2P78367 333 aa9.42□□□□□ -0.9
CDC42BPA-210ENST00000462553 ACVR2BQ13705 512 aa9.42□□□□□ -0.9
CDC42BPA-210ENST00000462553 CCDC144BQ3MJ40 725 aa9.42□□□□□ -0.9
CDC42BPA-210ENST00000462553 CCDC129Q6ZRS4 1044 aa9.42□□□□□ -0.9
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