RNA–Protein interactions for RNA: ENST00000460558.5

ECHDC1-211, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 301 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-211ENST00000460558 NIF3L1Q9GZT8 377 aa5.24□□□□□ -1.57
ECHDC1-211ENST00000460558 COA1Q9GZY4 146 aa5.24□□□□□ -1.57
ECHDC1-211ENST00000460558 DNAJC25Q9H1X3 360 aa5.24□□□□□ -1.57
ECHDC1-211ENST00000460558 ANKRD11Q6UB99 2663 aaPredicted RBP5.23□□□□□ -1.57
ECHDC1-211ENST00000460558 WDFY4Q6ZS81 3184 aa5.23□□□□□ -1.57
ECHDC1-211ENST00000460558 CHD6Q8TD26 2715 aa5.23□□□□□ -1.57
ECHDC1-211ENST00000460558 PNMA6FA0A0J9YX94 578 aa5.23□□□□□ -1.57
ECHDC1-211ENST00000460558 HSFX4A0A1B0GTS1 333 aaPredicted RBP5.23□□□□□ -1.57
ECHDC1-211ENST00000460558 HSFX3A0A1B0GWH4 333 aaPredicted RBP5.23□□□□□ -1.57
ECHDC1-211ENST00000460558 PI4K2BG5E9Z4 385 aa5.23□□□□□ -1.57
ECHDC1-211ENST00000460558 AVPP01185 164 aa5.23□□□□□ -1.57
ECHDC1-211ENST00000460558 GNA15P30679 374 aa5.23□□□□□ -1.57
ECHDC1-211ENST00000460558 INPP5BP32019 993 aa5.23□□□□□ -1.57
ECHDC1-211ENST00000460558 KCNQ1P51787 676 aa5.23□□□□□ -1.57
ECHDC1-211ENST00000460558 ATP2B2Q01814 1243 aa5.23□□□□□ -1.57
ECHDC1-211ENST00000460558 PPATQ06203 517 aa5.23□□□□□ -1.57
ECHDC1-211ENST00000460558 TAF7Q15545 349 aaPredicted RBP5.23□□□□□ -1.57
ECHDC1-211ENST00000460558 TSNAXIP1Q2TAA8 658 aa5.23□□□□□ -1.57
ECHDC1-211ENST00000460558 CFAP100Q494V2 611 aa5.23□□□□□ -1.57
ECHDC1-211ENST00000460558 MCM10Q7L590 875 aa5.23□□□□□ -1.57
ECHDC1-211ENST00000460558 METTL16Q86W50 562 aaKnown RBP5.23□□□□□ -1.57
ECHDC1-211ENST00000460558 RHPN1Q8TCX5 695 aa5.23□□□□□ -1.57
ECHDC1-211ENST00000460558 TIFAQ96CG3 184 aa5.23□□□□□ -1.57
ECHDC1-211ENST00000460558 FBXL18Q96ME1 805 aa5.23□□□□□ -1.57
ECHDC1-211ENST00000460558 FRMD6Q96NE9 622 aa5.23□□□□□ -1.57
ECHDC1-211ENST00000460558 WRNIP1Q96S55 665 aa5.23□□□□□ -1.57
ECHDC1-211ENST00000460558 PRDM12Q9H4Q4 367 aa5.23□□□□□ -1.57
ECHDC1-211ENST00000460558 METTL5Q9NRN9 209 aaKnown RBP5.23□□□□□ -1.57
ECHDC1-211ENST00000460558 RNF19AQ9NV58 838 aa5.23□□□□□ -1.57
ECHDC1-211ENST00000460558 SNCAIPQ9Y6H5 919 aa5.23□□□□□ -1.57
ECHDC1-211ENST00000460558 FAM208BQ5VWN6 2430 aa5.23□□□□□ -1.57
ECHDC1-211ENST00000460558 MAP1BP46821 2468 aaKnown RBP5.22□□□□□ -1.57
ECHDC1-211ENST00000460558 GVINP1Q7Z2Y8 2422 aa5.22□□□□□ -1.57
ECHDC1-211ENST00000460558 U2SURPO15042 1029 aaKnown RBP5.22□□□□□ -1.57
ECHDC1-211ENST00000460558 CAPN5O15484 640 aaPredicted RBP5.22□□□□□ -1.57
ECHDC1-211ENST00000460558 SORBS3O60504 671 aa5.22□□□□□ -1.57
ECHDC1-211ENST00000460558 CYP2C8P10632 490 aa5.22□□□□□ -1.57
ECHDC1-211ENST00000460558 HSP90B1P14625 803 aaKnown RBP5.22□□□□□ -1.57
ECHDC1-211ENST00000460558 PCSK2P16519 638 aa5.22□□□□□ -1.57
ECHDC1-211ENST00000460558 TNNI2P48788 182 aa5.22□□□□□ -1.57
ECHDC1-211ENST00000460558 RBM5P52756 815 aaKnown RBP eCLIP5.22□□□□□ -1.57
ECHDC1-211ENST00000460558 HDLBPQ00341 1268 aaKnown RBP5.22□□□□□ -1.57
ECHDC1-211ENST00000460558 TFF2Q03403 129 aa5.22□□□□□ -1.57
ECHDC1-211ENST00000460558 ERMP1Q7Z2K6 904 aa5.22□□□□□ -1.57
ECHDC1-211ENST00000460558 ZNF280CQ8ND82 737 aa5.22□□□□□ -1.57
ECHDC1-211ENST00000460558 GPR152Q8TDT2 470 aa5.22□□□□□ -1.57
ECHDC1-211ENST00000460558 HOOK2Q96ED9 719 aa5.22□□□□□ -1.57
ECHDC1-211ENST00000460558 FAM89AQ96GI7 184 aa5.22□□□□□ -1.57
ECHDC1-211ENST00000460558 PRMT6Q96LA8 375 aaPredicted RBP5.22□□□□□ -1.57
ECHDC1-211ENST00000460558 TEPSINQ96N21 525 aa5.22□□□□□ -1.57
ECHDC1-211ENST00000460558 POLR3GLQ9BT43 218 aa5.22□□□□□ -1.57
ECHDC1-211ENST00000460558 SEC31BQ9NQW1 1179 aa5.22□□□□□ -1.57
ECHDC1-211ENST00000460558 PCDHAC2Q9Y5I4 1007 aa5.22□□□□□ -1.57
ECHDC1-211ENST00000460558 A0A0G2JMZ2 1700 aa5.22□□□□□ -1.57
ECHDC1-211ENST00000460558 NCOR2Q9Y618 2525 aa5.22□□□□□ -1.57
ECHDC1-211ENST00000460558 REV3LO60673 3130 aa5.21□□□□□ -1.58
ECHDC1-211ENST00000460558 A0A1B0GTH6 734 aa5.21□□□□□ -1.58
ECHDC1-211ENST00000460558 EIF1AYO14602 144 aaKnown RBP5.21□□□□□ -1.58
ECHDC1-211ENST00000460558 IRS4O14654 1257 aaPredicted RBP5.21□□□□□ -1.58
ECHDC1-211ENST00000460558 NEFLP07196 543 aa5.21□□□□□ -1.58
ECHDC1-211ENST00000460558 ITGB8P26012 769 aa5.21□□□□□ -1.58
ECHDC1-211ENST00000460558 GRNP28799 593 aaKnown RBP5.21□□□□□ -1.58
ECHDC1-211ENST00000460558 IDH3AP50213 366 aa5.21□□□□□ -1.58
ECHDC1-211ENST00000460558 ARSDP51689 593 aa5.21□□□□□ -1.58
ECHDC1-211ENST00000460558 RTP1P59025 263 aa5.21□□□□□ -1.58
ECHDC1-211ENST00000460558 RAD51AP2Q09MP3 1159 aa5.21□□□□□ -1.58
ECHDC1-211ENST00000460558 ORC1Q13415 861 aa5.21□□□□□ -1.58
ECHDC1-211ENST00000460558 TRIP4Q15650 581 aaPredicted RBP5.21□□□□□ -1.58
ECHDC1-211ENST00000460558 CCDC152Q4G0S7 254 aa5.21□□□□□ -1.58
ECHDC1-211ENST00000460558 PDE12Q6L8Q7 609 aaKnown RBP5.21□□□□□ -1.58
ECHDC1-211ENST00000460558 MRPL14Q6P1L8 145 aaKnown RBP5.21□□□□□ -1.58
ECHDC1-211ENST00000460558 COPS6Q7L5N1 327 aa5.21□□□□□ -1.58
ECHDC1-211ENST00000460558 BTLAQ7Z6A9 289 aa5.21□□□□□ -1.58
ECHDC1-211ENST00000460558 ANKRD18AQ8IVF6 992 aa5.21□□□□□ -1.58
ECHDC1-211ENST00000460558 SMCR8Q8TEV9 937 aaPredicted RBP5.21□□□□□ -1.58
ECHDC1-211ENST00000460558 PNISRQ8TF01 805 aaKnown RBP5.21□□□□□ -1.58
ECHDC1-211ENST00000460558 PIK3R5Q8WYR1 880 aa5.21□□□□□ -1.58
ECHDC1-211ENST00000460558 BADQ92934 168 aa5.21□□□□□ -1.58
ECHDC1-211ENST00000460558 ZKSCAN4Q969J2 545 aaPredicted RBP5.21□□□□□ -1.58
ECHDC1-211ENST00000460558 HSH2DQ96JZ2 352 aa5.21□□□□□ -1.58
ECHDC1-211ENST00000460558 THUMPD2Q9BTF0 503 aaKnown RBP5.21□□□□□ -1.58
ECHDC1-211ENST00000460558 SENP6Q9GZR1 1112 aaPredicted RBP5.21□□□□□ -1.58
ECHDC1-211ENST00000460558 CRISPLD1Q9H336 500 aa5.21□□□□□ -1.58
ECHDC1-211ENST00000460558 POLMQ9NP87 494 aaPredicted RBP5.21□□□□□ -1.58
ECHDC1-211ENST00000460558 PRDM5Q9NQX1 630 aaPredicted RBP5.21□□□□□ -1.58
ECHDC1-211ENST00000460558 MIS18AQ9NYP9 233 aa5.21□□□□□ -1.58
ECHDC1-211ENST00000460558 KCNMB2Q9Y691 235 aa5.21□□□□□ -1.58
ECHDC1-211ENST00000460558 PHIPQ8WWQ0 1821 aa5.2□□□□□ -1.58
ECHDC1-211ENST00000460558 A0A1B0GUL6 1792 aa5.2□□□□□ -1.58
ECHDC1-211ENST00000460558 TRANK1O15050 2925 aa5.2□□□□□ -1.58
ECHDC1-211ENST00000460558 F8W031 263 aaPredicted RBP5.2□□□□□ -1.58
ECHDC1-211ENST00000460558 ERC2O15083 957 aa5.2□□□□□ -1.58
ECHDC1-211ENST00000460558 HTATSF1O43719 755 aaKnown RBP5.2□□□□□ -1.58
ECHDC1-211ENST00000460558 TNFRSF21O75509 655 aa5.2□□□□□ -1.58
ECHDC1-211ENST00000460558 KRT37O76014 449 aa5.2□□□□□ -1.58
ECHDC1-211ENST00000460558 RGS20O76081 388 aa5.2□□□□□ -1.58
ECHDC1-211ENST00000460558 UPP2O95045 317 aa5.2□□□□□ -1.58
ECHDC1-211ENST00000460558 PRKAR2BP31323 418 aa5.2□□□□□ -1.58
ECHDC1-211ENST00000460558 SMCPP49901 116 aaPredicted RBP5.2□□□□□ -1.58
ECHDC1-211ENST00000460558 CCT4P50991 539 aaKnown RBP5.2□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms