RNA–Protein interactions for RNA: ENST00000454350.5

UBE2D4-208, Transcript of ubiquitin conjugating enzyme E2 D4 (putative), humanhuman

TSL 2

Gene UBE2D4, Length 789 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4-208ENST00000454350 RANBP6O60518 1105 aaKnown RBP21.92■■□□□ 1.1
UBE2D4-208ENST00000454350 MYCNP04198 464 aaPredicted RBP21.92■■□□□ 1.1
UBE2D4-208ENST00000454350 SLC1A4P43007 532 aa21.92■■□□□ 1.1
UBE2D4-208ENST00000454350 PPP4R3BQ5MIZ7 849 aa21.92■■□□□ 1.1
UBE2D4-208ENST00000454350 RCSD1Q6JBY9 416 aa21.92■■□□□ 1.1
UBE2D4-208ENST00000454350 KCTD1Q719H9 257 aa21.92■■□□□ 1.1
UBE2D4-208ENST00000454350 CHD1LQ86WJ1 897 aa21.92■■□□□ 1.1
UBE2D4-208ENST00000454350 CHURC1Q8WUH1 139 aa21.92■■□□□ 1.1
UBE2D4-208ENST00000454350 AGBL1Q96MI9 1066 aa21.92■■□□□ 1.1
UBE2D4-208ENST00000454350 KATNBL1Q9H079 304 aa21.92■■□□□ 1.1
UBE2D4-208ENST00000454350 RWDD1Q9H446 243 aaPredicted RBP21.92■■□□□ 1.1
UBE2D4-208ENST00000454350 FBXO40Q9UH90 709 aa21.92■■□□□ 1.1
UBE2D4-208ENST00000454350 CCDC171Q6TFL3 1326 aa21.91■■□□□ 1.1
UBE2D4-208ENST00000454350 SYNRGQ9UMZ2 1314 aa21.91■■□□□ 1.1
UBE2D4-208ENST00000454350 CCSAPQ6IQ19 270 aaPredicted RBP21.91■■□□□ 1.1
UBE2D4-208ENST00000454350 GPR153Q6NV75 609 aa21.91■■□□□ 1.1
UBE2D4-208ENST00000454350 FAM133AQ8N9E0 248 aa21.91■■□□□ 1.1
UBE2D4-208ENST00000454350 KLHDC9Q8NEP7 349 aa21.91■■□□□ 1.1
UBE2D4-208ENST00000454350 CDKN2AIPQ9NXV6 580 aaPredicted RBP21.91■■□□□ 1.1
UBE2D4-208ENST00000454350 PRR12Q9ULL5 1215 aa21.91■■□□□ 1.1
UBE2D4-208ENST00000454350 CNPY2Q9Y2B0 182 aa21.91■■□□□ 1.1
UBE2D4-208ENST00000454350 CTDP1Q9Y5B0 961 aaPredicted RBP21.91■■□□□ 1.1
UBE2D4-208ENST00000454350 CNTN2Q02246 1040 aa21.9■■□□□ 1.1
UBE2D4-208ENST00000454350 SH3RF1Q7Z6J0 888 aa21.9■■□□□ 1.1
UBE2D4-208ENST00000454350 RNF180Q86T96 592 aa21.9■■□□□ 1.1
UBE2D4-208ENST00000454350 ANKRD35Q8N283 1001 aa21.9■■□□□ 1.1
UBE2D4-208ENST00000454350 A1CFQ9NQ94 594 aaKnown RBP21.9■■□□□ 1.1
UBE2D4-208ENST00000454350 PDLIM7Q9NR12 457 aa21.9■■□□□ 1.1
UBE2D4-208ENST00000454350 HOMER2Q9NSB8 354 aa21.9■■□□□ 1.1
UBE2D4-208ENST00000454350 TCP11L1Q9NUJ3 509 aa21.9■■□□□ 1.1
UBE2D4-208ENST00000454350 ASTN1O14525 1302 aa21.89■■□□□ 1.1
UBE2D4-208ENST00000454350 TRIM6-TRIM34B2RNG4 842 aa21.89■■□□□ 1.09
UBE2D4-208ENST00000454350 SDSP20132 328 aa21.89■■□□□ 1.09
UBE2D4-208ENST00000454350 SNAP25P60880 206 aa21.89■■□□□ 1.09
UBE2D4-208ENST00000454350 IRX5P78411 483 aaPredicted RBP21.89■■□□□ 1.09
UBE2D4-208ENST00000454350 ACVR2BQ13705 512 aa21.89■■□□□ 1.09
UBE2D4-208ENST00000454350 ACAD9Q9H845 621 aa21.89■■□□□ 1.09
UBE2D4-208ENST00000454350 RNF146Q9NTX7 359 aa21.89■■□□□ 1.09
UBE2D4-208ENST00000454350 FAM184BQ9ULE4 1060 aa21.89■■□□□ 1.09
UBE2D4-208ENST00000454350 A0A1W2PQ45 241 aaPredicted RBP21.88■■□□□ 1.09
UBE2D4-208ENST00000454350 A0A1W2PQY0 241 aa21.88■■□□□ 1.09
UBE2D4-208ENST00000454350 TRIM43BA6NCK2 446 aa21.88■■□□□ 1.09
UBE2D4-208ENST00000454350 MYADML2A6NDP7 307 aa21.88■■□□□ 1.09
UBE2D4-208ENST00000454350 SOWAHBA6NEL2 793 aa21.88■■□□□ 1.09
UBE2D4-208ENST00000454350 HAND2P61296 217 aa21.88■■□□□ 1.09
UBE2D4-208ENST00000454350 TLE2Q04725 743 aa21.88■■□□□ 1.09
UBE2D4-208ENST00000454350 TTBK2Q6IQ55 1244 aa21.88■■□□□ 1.09
UBE2D4-208ENST00000454350 BTNL9Q6UXG8 535 aa21.88■■□□□ 1.09
UBE2D4-208ENST00000454350 ARMCX2Q7L311 632 aa21.88■■□□□ 1.09
UBE2D4-208ENST00000454350 TBC1D10CQ8IV04 446 aa21.88■■□□□ 1.09
UBE2D4-208ENST00000454350 RILPL2Q969X0 211 aa21.88■■□□□ 1.09
UBE2D4-208ENST00000454350 TRIM43Q96BQ3 446 aaPredicted RBP21.88■■□□□ 1.09
UBE2D4-208ENST00000454350 TMEM47Q9BQJ4 181 aa21.88■■□□□ 1.09
UBE2D4-208ENST00000454350 TSEN34Q9BSV6 310 aaKnown RBP21.88■■□□□ 1.09
UBE2D4-208ENST00000454350 ABHD16BQ9H3Z7 469 aa21.88■■□□□ 1.09
UBE2D4-208ENST00000454350 DUSP11O75319 330 aaKnown RBP21.87■■□□□ 1.09
UBE2D4-208ENST00000454350 TKFCQ3LXA3 575 aa21.87■■□□□ 1.09
UBE2D4-208ENST00000454350 CCDC144BQ3MJ40 725 aa21.87■■□□□ 1.09
UBE2D4-208ENST00000454350 MUM1L1Q5H9M0 696 aa21.87■■□□□ 1.09
UBE2D4-208ENST00000454350 CCDC144CPQ8IYA2 1237 aa21.87■■□□□ 1.09
UBE2D4-208ENST00000454350 DCAF4Q8WV16 495 aa21.87■■□□□ 1.09
UBE2D4-208ENST00000454350 TRERF1Q96PN7 1200 aa21.87■■□□□ 1.09
UBE2D4-208ENST00000454350 LBHD1Q9BQE6 289 aaPredicted RBP21.87■■□□□ 1.09
UBE2D4-208ENST00000454350 ZHX1Q9UKY1 873 aaPredicted RBP21.87■■□□□ 1.09
UBE2D4-208ENST00000454350 ISY1Q9ULR0 285 aaKnown RBP21.87■■□□□ 1.09
UBE2D4-208ENST00000454350 CTAGE5O15320 804 aa21.86■■□□□ 1.09
UBE2D4-208ENST00000454350 TOP1P11387 765 aaKnown RBP21.86■■□□□ 1.09
UBE2D4-208ENST00000454350 ITGB8P26012 769 aa21.86■■□□□ 1.09
UBE2D4-208ENST00000454350 CST5P28325 142 aaPredicted RBP21.86■■□□□ 1.09
UBE2D4-208ENST00000454350 ACLYP53396 1101 aa21.86■■□□□ 1.09
UBE2D4-208ENST00000454350 IKQ13123 557 aaPredicted RBP21.86■■□□□ 1.09
UBE2D4-208ENST00000454350 RRP12Q5JTH9 1297 aaKnown RBP21.86■■□□□ 1.09
UBE2D4-208ENST00000454350 AKNAD1Q5T1N1 836 aa21.86■■□□□ 1.09
UBE2D4-208ENST00000454350 CCDC174Q6PII3 467 aa21.86■■□□□ 1.09
UBE2D4-208ENST00000454350 UPF3AQ9H1J1 476 aaKnown RBP21.86■■□□□ 1.09
UBE2D4-208ENST00000454350 RANBP17Q9H2T7 1088 aaKnown RBP21.86■■□□□ 1.09
UBE2D4-208ENST00000454350 MTMR7Q9Y216 660 aa21.86■■□□□ 1.09
UBE2D4-208ENST00000454350 POTEB2H3BUK9 544 aa21.85■■□□□ 1.09
UBE2D4-208ENST00000454350 ALAS1P13196 640 aa21.85■■□□□ 1.09
UBE2D4-208ENST00000454350 SLC16A2P36021 539 aa21.85■■□□□ 1.09
UBE2D4-208ENST00000454350 KCNA10Q16322 511 aa21.85■■□□□ 1.09
UBE2D4-208ENST00000454350 Q7L0L9 218 aa21.85■■□□□ 1.09
UBE2D4-208ENST00000454350 TOMM22Q9NS69 142 aa21.85■■□□□ 1.09
UBE2D4-208ENST00000454350 PRKAG2Q9UGJ0 569 aa21.85■■□□□ 1.09
UBE2D4-208ENST00000454350 DDX49Q9Y6V7 483 aaKnown RBP21.85■■□□□ 1.09
UBE2D4-208ENST00000454350 MYH6P13533 1939 aa21.84■■□□□ 1.09
UBE2D4-208ENST00000454350 NKX3-2P78367 333 aa21.84■■□□□ 1.09
UBE2D4-208ENST00000454350 BADQ92934 168 aa21.84■■□□□ 1.09
UBE2D4-208ENST00000454350 PRDM5Q9NQX1 630 aaPredicted RBP21.84■■□□□ 1.09
UBE2D4-208ENST00000454350 CYP39A1Q9NYL5 469 aa21.84■■□□□ 1.09
UBE2D4-208ENST00000454350 NEDD4P46934 1319 aa21.83■■□□□ 1.09
UBE2D4-208ENST00000454350 MOXD2PA6NHM9 499 aa21.83■■□□□ 1.09
UBE2D4-208ENST00000454350 ICAM1P05362 532 aa21.83■■□□□ 1.09
UBE2D4-208ENST00000454350 SNHG28P0DPA3 235 aa21.83■■□□□ 1.09
UBE2D4-208ENST00000454350 PDHBP11177 359 aa21.83■■□□□ 1.09
UBE2D4-208ENST00000454350 PCP11498 1178 aaKnown RBP21.83■■□□□ 1.09
UBE2D4-208ENST00000454350 GJA9P57773 515 aa21.83■■□□□ 1.09
UBE2D4-208ENST00000454350 CCDC96Q2M329 555 aa21.83■■□□□ 1.09
UBE2D4-208ENST00000454350 ANKRD33Q7Z3H0 272 aa21.83■■□□□ 1.09
UBE2D4-208ENST00000454350 DEFB123Q8N688 67 aa21.83■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms