RNA–Protein interactions for RNA: ENST00000450940.5

USP40-207, Transcript of ubiquitin specific peptidase 40, humanhuman

TSL 3

Gene USP40, Length 670 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP40-207ENST00000450940 IKQ13123 557 aaPredicted RBP22.85■■□□□ 1.25
USP40-207ENST00000450940 ANKRD35Q8N283 1001 aa22.85■■□□□ 1.25
USP40-207ENST00000450940 CHMP4CQ96CF2 233 aa22.85■■□□□ 1.25
USP40-207ENST00000450940 FGD4Q96M96 766 aa22.85■■□□□ 1.25
USP40-207ENST00000450940 AGBL1Q96MI9 1066 aa22.85■■□□□ 1.25
USP40-207ENST00000450940 IL25Q9H293 177 aa22.85■■□□□ 1.25
USP40-207ENST00000450940 CTNNA3Q9UI47 895 aa22.85■■□□□ 1.25
USP40-207ENST00000450940 ISY1Q9ULR0 285 aaKnown RBP22.85■■□□□ 1.25
USP40-207ENST00000450940 SNHG28P0DPA3 235 aa22.84■■□□□ 1.25
USP40-207ENST00000450940 FXR1P51114 621 aaKnown RBP eCLIP22.84■■□□□ 1.25
USP40-207ENST00000450940 DGKHQ86XP1 1220 aa22.84■■□□□ 1.25
USP40-207ENST00000450940 SENP6Q9GZR1 1112 aaPredicted RBP22.84■■□□□ 1.25
USP40-207ENST00000450940 ACAD9Q9H845 621 aa22.84■■□□□ 1.25
USP40-207ENST00000450940 GJC2Q5T442 439 aaPredicted RBP22.83■■□□□ 1.25
USP40-207ENST00000450940 ANO1Q5XXA6 986 aa22.83■■□□□ 1.25
USP40-207ENST00000450940 TTBK2Q6IQ55 1244 aa22.83■■□□□ 1.25
USP40-207ENST00000450940 ANKS1AQ92625 1134 aa22.83■■□□□ 1.25
USP40-207ENST00000450940 GDF15Q99988 308 aa22.83■■□□□ 1.25
USP40-207ENST00000450940 RANBP17Q9H2T7 1088 aaKnown RBP22.83■■□□□ 1.25
USP40-207ENST00000450940 RNF146Q9NTX7 359 aa22.83■■□□□ 1.25
USP40-207ENST00000450940 CNPY2Q9Y2B0 182 aa22.83■■□□□ 1.25
USP40-207ENST00000450940 RAD50Q92878 1312 aa22.82■■□□□ 1.24
USP40-207ENST00000450940 A0A1W2PPC1 479 aa22.82■■□□□ 1.24
USP40-207ENST00000450940 PDHBP11177 359 aa22.82■■□□□ 1.24
USP40-207ENST00000450940 BMP8BP34820 402 aa22.82■■□□□ 1.24
USP40-207ENST00000450940 LRRC41Q15345 812 aa22.82■■□□□ 1.24
USP40-207ENST00000450940 IMMTQ16891 758 aaKnown RBP22.82■■□□□ 1.24
USP40-207ENST00000450940 CCDC96Q2M329 555 aa22.82■■□□□ 1.24
USP40-207ENST00000450940 CCDC178Q5BJE1 867 aa22.82■■□□□ 1.24
USP40-207ENST00000450940 FAM133AQ8N9E0 248 aa22.82■■□□□ 1.24
USP40-207ENST00000450940 TRERF1Q96PN7 1200 aa22.82■■□□□ 1.24
USP40-207ENST00000450940 A1CFQ9NQ94 594 aaKnown RBP22.82■■□□□ 1.24
USP40-207ENST00000450940 HOMER2Q9NSB8 354 aa22.82■■□□□ 1.24
USP40-207ENST00000450940 MTMR7Q9Y216 660 aa22.82■■□□□ 1.24
USP40-207ENST00000450940 KBTBD13C9JR72 458 aa22.81■■□□□ 1.24
USP40-207ENST00000450940 ICAM1P05362 532 aa22.81■■□□□ 1.24
USP40-207ENST00000450940 RARBP10826 455 aa22.81■■□□□ 1.24
USP40-207ENST00000450940 AKR1A1P14550 325 aa22.81■■□□□ 1.24
USP40-207ENST00000450940 CHMLP26374 656 aa22.81■■□□□ 1.24
USP40-207ENST00000450940 ZMYND8Q9ULU4 1186 aaPredicted RBP22.81■■□□□ 1.24
USP40-207ENST00000450940 KDM4AO75164 1064 aa22.8■■□□□ 1.24
USP40-207ENST00000450940 ALAS1P13196 640 aa22.8■■□□□ 1.24
USP40-207ENST00000450940 SLC16A2P36021 539 aa22.8■■□□□ 1.24
USP40-207ENST00000450940 SNAP25P60880 206 aa22.8■■□□□ 1.24
USP40-207ENST00000450940 ZNF543Q08ER8 600 aa22.8■■□□□ 1.24
USP40-207ENST00000450940 SYDE2Q5VT97 1194 aa22.8■■□□□ 1.24
USP40-207ENST00000450940 CCDC174Q6PII3 467 aa22.8■■□□□ 1.24
USP40-207ENST00000450940 XPNPEP3Q9NQH7 507 aa22.8■■□□□ 1.24
USP40-207ENST00000450940 ZSWIM5Q9P217 1185 aa22.8■■□□□ 1.24
USP40-207ENST00000450940 POTEB2H3BUK9 544 aa22.79■■□□□ 1.24
USP40-207ENST00000450940 CNTN2Q02246 1040 aa22.79■■□□□ 1.24
USP40-207ENST00000450940 IQCA1Q86XH1 822 aa22.79■■□□□ 1.24
USP40-207ENST00000450940 RUFY2Q8WXA3 655 aa22.79■■□□□ 1.24
USP40-207ENST00000450940 ZKSCAN3Q9BRR0 538 aa22.79■■□□□ 1.24
USP40-207ENST00000450940 ABHD16BQ9H3Z7 469 aa22.79■■□□□ 1.24
USP40-207ENST00000450940 GPCPD1Q9NPB8 672 aa22.79■■□□□ 1.24
USP40-207ENST00000450940 CDKN2AIPQ9NXV6 580 aaPredicted RBP22.79■■□□□ 1.24
USP40-207ENST00000450940 FAM184BQ9ULE4 1060 aa22.79■■□□□ 1.24
USP40-207ENST00000450940 LCTP09848 1927 aa22.78■■□□□ 1.24
USP40-207ENST00000450940 SOWAHBA6NEL2 793 aa22.78■■□□□ 1.24
USP40-207ENST00000450940 B4E1Z4 1266 aa22.78■■□□□ 1.24
USP40-207ENST00000450940 ACVR2BQ13705 512 aa22.78■■□□□ 1.24
USP40-207ENST00000450940 SNX17Q15036 470 aa22.78■■□□□ 1.24
USP40-207ENST00000450940 MUM1L1Q5H9M0 696 aa22.78■■□□□ 1.24
USP40-207ENST00000450940 C1orf53Q5VUE5 145 aa22.78■■□□□ 1.24
USP40-207ENST00000450940 SLC39A5Q6ZMH5 540 aa22.78■■□□□ 1.24
USP40-207ENST00000450940 ZSCAN10Q96SZ4 725 aaPredicted RBP22.78■■□□□ 1.24
USP40-207ENST00000450940 KRT23Q9C075 422 aa22.78■■□□□ 1.24
USP40-207ENST00000450940 KATNBL1Q9H079 304 aa22.78■■□□□ 1.24
USP40-207ENST00000450940 CNNM2Q9H8M5 875 aa22.78■■□□□ 1.24
USP40-207ENST00000450940 PNMA2Q9UL42 364 aa22.78■■□□□ 1.24
USP40-207ENST00000450940 CCPG1Q9ULG6 757 aa22.78■■□□□ 1.24
USP40-207ENST00000450940 PHF24Q9UPV7 400 aa22.78■■□□□ 1.24
USP40-207ENST00000450940 FRMPD2Q68DX3 1309 aaPredicted RBP22.78■■□□□ 1.24
USP40-207ENST00000450940 ADAMTS4O75173 837 aa22.77■■□□□ 1.24
USP40-207ENST00000450940 SYN1P17600 705 aa22.77■■□□□ 1.24
USP40-207ENST00000450940 GPATCH4Q5T3I0 446 aaKnown RBP22.77■■□□□ 1.24
USP40-207ENST00000450940 ARMCX2Q7L311 632 aa22.77■■□□□ 1.24
USP40-207ENST00000450940 RNF180Q86T96 592 aa22.77■■□□□ 1.24
USP40-207ENST00000450940 CYP39A1Q9NYL5 469 aa22.77■■□□□ 1.24
USP40-207ENST00000450940 DUSP11O75319 330 aaKnown RBP22.76■■□□□ 1.23
USP40-207ENST00000450940 PGK1P00558 417 aa22.76■■□□□ 1.23
USP40-207ENST00000450940 ADCYAP1R1P41586 468 aa22.76■■□□□ 1.23
USP40-207ENST00000450940 ATN1P54259 1190 aaPredicted RBP22.76■■□□□ 1.23
USP40-207ENST00000450940 CCDC144CPQ8IYA2 1237 aa22.76■■□□□ 1.23
USP40-207ENST00000450940 ENAHQ8N8S7 591 aaPredicted RBP22.76■■□□□ 1.23
USP40-207ENST00000450940 PNMA1Q8ND90 353 aa22.76■■□□□ 1.23
USP40-207ENST00000450940 TSEN34Q9BSV6 310 aaKnown RBP22.76■■□□□ 1.23
USP40-207ENST00000450940 ZHX1Q9UKY1 873 aaPredicted RBP22.76■■□□□ 1.23
USP40-207ENST00000450940 SGSM2O43147 1006 aa22.75■■□□□ 1.23
USP40-207ENST00000450940 MAGEA10P43363 369 aaPredicted RBP22.75■■□□□ 1.23
USP40-207ENST00000450940 RTP1P59025 263 aa22.75■■□□□ 1.23
USP40-207ENST00000450940 KLHDC9Q8NEP7 349 aa22.75■■□□□ 1.23
USP40-207ENST00000450940 ASTN1O14525 1302 aa22.75■■□□□ 1.23
USP40-207ENST00000450940 ASB14A6NK59 587 aa22.74■■□□□ 1.23
USP40-207ENST00000450940 PTH1RQ03431 593 aa22.74■■□□□ 1.23
USP40-207ENST00000450940 CCDC144BQ3MJ40 725 aa22.74■■□□□ 1.23
USP40-207ENST00000450940 CCSAPQ6IQ19 270 aaPredicted RBP22.74■■□□□ 1.23
USP40-207ENST00000450940 LENG1Q96BZ8 264 aaPredicted RBP22.74■■□□□ 1.23
USP40-207ENST00000450940 KAT14Q9H8E8 782 aa22.74■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms