RNA–Protein interactions for RNA: ENST00000447609.5

LMO3-209, Transcript of LIM domain only 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMO3, Length 3,365 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-209ENST00000447609 MCAMP43121 646 aa6.12□□□□□ -1.43
LMO3-209ENST00000447609 SARNPP82979 210 aaKnown RBP6.12□□□□□ -1.43
LMO3-209ENST00000447609 DRP2Q13474 957 aa6.12□□□□□ -1.43
LMO3-209ENST00000447609 ZKSCAN8Q15776 578 aaPredicted RBP6.12□□□□□ -1.43
LMO3-209ENST00000447609 ZNF569Q5MCW4 686 aa6.12□□□□□ -1.43
LMO3-209ENST00000447609 DHX32Q7L7V1 743 aaKnown RBP6.12□□□□□ -1.43
LMO3-209ENST00000447609 MLKLQ8NB16 471 aa6.12□□□□□ -1.43
LMO3-209ENST00000447609 APPBP2Q92624 585 aa6.12□□□□□ -1.43
LMO3-209ENST00000447609 KIFC2Q96AC6 838 aa6.12□□□□□ -1.43
LMO3-209ENST00000447609 C8orf76Q96K31 380 aa6.12□□□□□ -1.43
LMO3-209ENST00000447609 WDR24Q96S15 920 aa6.12□□□□□ -1.43
LMO3-209ENST00000447609 UBAC1Q9BSL1 405 aa6.12□□□□□ -1.43
LMO3-209ENST00000447609 CAPS2Q9BXY5 557 aa6.12□□□□□ -1.43
LMO3-209ENST00000447609 WNK3Q9BYP7 1800 aa6.12□□□□□ -1.43
LMO3-209ENST00000447609 WTIPA6NIX2 430 aaPredicted RBP6.11□□□□□ -1.43
LMO3-209ENST00000447609 PHACTR2O75167 634 aa6.11□□□□□ -1.43
LMO3-209ENST00000447609 GABBR2O75899 941 aa6.11□□□□□ -1.43
LMO3-209ENST00000447609 IPO7O95373 1038 aaKnown RBP6.11□□□□□ -1.43
LMO3-209ENST00000447609 RHOXF2BP0C7M4 288 aa6.11□□□□□ -1.43
LMO3-209ENST00000447609 GNAT2P19087 354 aa6.11□□□□□ -1.43
LMO3-209ENST00000447609 ELF1P32519 619 aa6.11□□□□□ -1.43
LMO3-209ENST00000447609 AKAP17AQ02040 695 aaKnown RBP6.11□□□□□ -1.43
LMO3-209ENST00000447609 TRIM14Q14142 442 aa6.11□□□□□ -1.43
LMO3-209ENST00000447609 KARSQ15046 597 aaKnown RBP6.11□□□□□ -1.43
LMO3-209ENST00000447609 NBPF20Q3BBV1 942 aa6.11□□□□□ -1.43
LMO3-209ENST00000447609 MCMDC2Q4G0Z9 681 aa6.11□□□□□ -1.43
LMO3-209ENST00000447609 FBXO33Q7Z6M2 555 aa6.11□□□□□ -1.43
LMO3-209ENST00000447609 TMTC1Q8IUR5 882 aa6.11□□□□□ -1.43
LMO3-209ENST00000447609 APOBEC3FQ8IUX4 373 aaKnown RBP6.11□□□□□ -1.43
LMO3-209ENST00000447609 TRIML1Q8N9V2 468 aa6.11□□□□□ -1.43
LMO3-209ENST00000447609 ZNF274Q96GC6 653 aaPredicted RBP6.11□□□□□ -1.43
LMO3-209ENST00000447609 RHOXF2Q9BQY4 288 aa6.11□□□□□ -1.43
LMO3-209ENST00000447609 ZSWIM4Q9H7M6 989 aa6.11□□□□□ -1.43
LMO3-209ENST00000447609 MYOZ2Q9NPC6 264 aa6.11□□□□□ -1.43
LMO3-209ENST00000447609 NMRK2Q9NPI5 230 aa6.11□□□□□ -1.43
LMO3-209ENST00000447609 ANGEL1Q9UNK9 670 aaKnown RBP6.11□□□□□ -1.43
LMO3-209ENST00000447609 SCAF8Q9UPN6 1271 aaKnown RBP6.11□□□□□ -1.43
LMO3-209ENST00000447609 CPLX1O14810 134 aa6.11□□□□□ -1.43
LMO3-209ENST00000447609 SLC8A1P32418 973 aa6.11□□□□□ -1.43
LMO3-209ENST00000447609 CCT5P48643 541 aa6.11□□□□□ -1.43
LMO3-209ENST00000447609 NDUFA8P51970 172 aa6.11□□□□□ -1.43
LMO3-209ENST00000447609 APBA1Q02410 837 aa6.11□□□□□ -1.43
LMO3-209ENST00000447609 MECOMQ03112 1051 aa6.11□□□□□ -1.43
LMO3-209ENST00000447609 IFFO1Q0D2I5 559 aa6.11□□□□□ -1.43
LMO3-209ENST00000447609 SCARF1Q14162 830 aa6.11□□□□□ -1.43
LMO3-209ENST00000447609 ELOA2Q8IYF1 753 aaPredicted RBP6.11□□□□□ -1.43
LMO3-209ENST00000447609 LINC00301Q8NCQ3 95 aa6.11□□□□□ -1.43
LMO3-209ENST00000447609 NSUN7Q8NE18 718 aaKnown RBP6.11□□□□□ -1.43
LMO3-209ENST00000447609 BCAS4Q8TDM0 211 aa6.11□□□□□ -1.43
LMO3-209ENST00000447609 ANKZF1Q9H8Y5 726 aa6.11□□□□□ -1.43
LMO3-209ENST00000447609 KCNQ5Q9NR82 932 aa6.11□□□□□ -1.43
LMO3-209ENST00000447609 KDM3BQ7LBC6 1761 aa6.11□□□□□ -1.43
LMO3-209ENST00000447609 SBF2Q86WG5 1849 aa6.11□□□□□ -1.43
LMO3-209ENST00000447609 KLRG2A4D1S0 409 aaPredicted RBP6.1□□□□□ -1.43
LMO3-209ENST00000447609 GOLGA6BA6NDN3 693 aa6.1□□□□□ -1.43
LMO3-209ENST00000447609 SHOX2O60902 331 aaPredicted RBP6.1□□□□□ -1.43
LMO3-209ENST00000447609 KCNA3P22001 575 aa6.1□□□□□ -1.43
LMO3-209ENST00000447609 MKRN3Q13064 507 aaKnown RBP6.1□□□□□ -1.43
LMO3-209ENST00000447609 CRYMQ14894 314 aa6.1□□□□□ -1.43
LMO3-209ENST00000447609 NCAPHQ15003 741 aa6.1□□□□□ -1.43
LMO3-209ENST00000447609 CSRNP1Q96S65 589 aa6.1□□□□□ -1.43
LMO3-209ENST00000447609 HAUS7Q99871 368 aa6.1□□□□□ -1.43
LMO3-209ENST00000447609 RNF41Q9H4P4 317 aaPredicted RBP6.1□□□□□ -1.43
LMO3-209ENST00000447609 ACTR5Q9H9F9 607 aaPredicted RBP6.1□□□□□ -1.43
LMO3-209ENST00000447609 XPO5Q9HAV4 1204 aaKnown RBP eCLIP6.1□□□□□ -1.43
LMO3-209ENST00000447609 TUBE1Q9UJT0 475 aa6.1□□□□□ -1.43
LMO3-209ENST00000447609 MYO6Q9UM54 1294 aa6.1□□□□□ -1.43
LMO3-209ENST00000447609 CAPN7Q9Y6W3 813 aa6.1□□□□□ -1.43
LMO3-209ENST00000447609 NDUFAB1O14561 156 aa6.1□□□□□ -1.43
LMO3-209ENST00000447609 GPAA1O43292 621 aa6.1□□□□□ -1.43
LMO3-209ENST00000447609 CDKL5O76039 1030 aa6.1□□□□□ -1.43
LMO3-209ENST00000447609 GCFC2P16383 781 aaKnown RBP6.1□□□□□ -1.43
LMO3-209ENST00000447609 ADD1P35611 737 aaKnown RBP6.1□□□□□ -1.43
LMO3-209ENST00000447609 DYNLL1P63167 89 aaKnown RBP6.1□□□□□ -1.43
LMO3-209ENST00000447609 TRIM29Q14134 588 aa6.1□□□□□ -1.43
LMO3-209ENST00000447609 PRAMEF18Q5VWM3 479 aa6.1□□□□□ -1.43
LMO3-209ENST00000447609 ANO1Q5XXA6 986 aa6.1□□□□□ -1.43
LMO3-209ENST00000447609 PRPF38AQ8NAV1 312 aaKnown RBP6.1□□□□□ -1.43
LMO3-209ENST00000447609 CAGE1Q8TC20 777 aa6.1□□□□□ -1.43
LMO3-209ENST00000447609 SLC10A4Q96EP9 437 aa6.1□□□□□ -1.43
LMO3-209ENST00000447609 EPC1Q9H2F5 836 aa6.1□□□□□ -1.43
LMO3-209ENST00000447609 STX8Q9UNK0 236 aa6.1□□□□□ -1.43
LMO3-209ENST00000447609 PPP6R2O75170 966 aa6.1□□□□□ -1.43
LMO3-209ENST00000447609 PFKFB1P16118 471 aa6.1□□□□□ -1.43
LMO3-209ENST00000447609 IREB2P48200 963 aaKnown RBP6.1□□□□□ -1.43
LMO3-209ENST00000447609 TBX2Q13207 712 aaPredicted RBP6.1□□□□□ -1.43
LMO3-209ENST00000447609 CCDC96Q2M329 555 aa6.1□□□□□ -1.43
LMO3-209ENST00000447609 MIGA2Q7L4E1 593 aa6.1□□□□□ -1.43
LMO3-209ENST00000447609 TAX1BP1Q86VP1 789 aa6.1□□□□□ -1.43
LMO3-209ENST00000447609 IQCA1Q86XH1 822 aa6.1□□□□□ -1.43
LMO3-209ENST00000447609 COG1Q8WTW3 980 aa6.1□□□□□ -1.43
LMO3-209ENST00000447609 SDR42E1Q8WUS8 393 aa6.1□□□□□ -1.43
LMO3-209ENST00000447609 LZTFL1Q9NQ48 299 aa6.1□□□□□ -1.43
LMO3-209ENST00000447609 PIH1D3Q9NQM4 214 aaKnown RBP6.1□□□□□ -1.43
LMO3-209ENST00000447609 ODF2LQ9ULJ1 636 aa6.1□□□□□ -1.43
LMO3-209ENST00000447609 EIF3HO15372 352 aaKnown RBP eCLIP6.09□□□□□ -1.43
LMO3-209ENST00000447609 HSF2BPO75031 334 aa6.09□□□□□ -1.43
LMO3-209ENST00000447609 FSBPO95073 299 aa6.09□□□□□ -1.43
LMO3-209ENST00000447609 CELF2O95319 508 aaKnown RBP6.09□□□□□ -1.43
LMO3-209ENST00000447609 TSPY3P0CV98 308 aa6.09□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms