RNA–Protein interactions for RNA: ENST00000444511.6

VSX1-206, Transcript of visual system homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene VSX1, Length 1,197 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-206ENST00000444511 MTMR7Q9Y216 660 aa24.88■■□□□ 1.57
VSX1-206ENST00000444511 TACC3Q9Y6A5 838 aa24.88■■□□□ 1.57
VSX1-206ENST00000444511 PLA2G6O60733 806 aa24.87■■□□□ 1.57
VSX1-206ENST00000444511 ADAMTS4O75173 837 aa24.87■■□□□ 1.57
VSX1-206ENST00000444511 ACVR2BQ13705 512 aa24.87■■□□□ 1.57
VSX1-206ENST00000444511 RRP12Q5JTH9 1297 aaKnown RBP24.87■■□□□ 1.57
VSX1-206ENST00000444511 SMC5Q8IY18 1101 aa24.87■■□□□ 1.57
VSX1-206ENST00000444511 DEFB123Q8N688 67 aa24.87■■□□□ 1.57
VSX1-206ENST00000444511 AGBL1Q96MI9 1066 aa24.87■■□□□ 1.57
VSX1-206ENST00000444511 RNF146Q9NTX7 359 aa24.87■■□□□ 1.57
VSX1-206ENST00000444511 SYNRGQ9UMZ2 1314 aa24.86■■□□□ 1.57
VSX1-206ENST00000444511 A0A1W2PQ45 241 aaPredicted RBP24.86■■□□□ 1.57
VSX1-206ENST00000444511 A0A1W2PQY0 241 aa24.86■■□□□ 1.57
VSX1-206ENST00000444511 POTEB2H3BUK9 544 aa24.86■■□□□ 1.57
VSX1-206ENST00000444511 FGRP09769 529 aa24.86■■□□□ 1.57
VSX1-206ENST00000444511 HSPD1P10809 573 aaKnown RBP24.86■■□□□ 1.57
VSX1-206ENST00000444511 TLE2Q04725 743 aa24.86■■□□□ 1.57
VSX1-206ENST00000444511 TKFCQ3LXA3 575 aa24.86■■□□□ 1.57
VSX1-206ENST00000444511 TSEN34Q9BSV6 310 aaKnown RBP24.86■■□□□ 1.57
VSX1-206ENST00000444511 ABHD16BQ9H3Z7 469 aa24.86■■□□□ 1.57
VSX1-206ENST00000444511 PDLIM7Q9NR12 457 aa24.86■■□□□ 1.57
VSX1-206ENST00000444511 ZNF536O15090 1300 aa24.86■■□□□ 1.57
VSX1-206ENST00000444511 DNAH12Q6ZR08 3092 aa24.85■■□□□ 1.57
VSX1-206ENST00000444511 DUSP11O75319 330 aaKnown RBP24.85■■□□□ 1.57
VSX1-206ENST00000444511 CCDC96Q2M329 555 aa24.85■■□□□ 1.57
VSX1-206ENST00000444511 CCDC174Q6PII3 467 aa24.85■■□□□ 1.57
VSX1-206ENST00000444511 ARMCX2Q7L311 632 aa24.85■■□□□ 1.57
VSX1-206ENST00000444511 RASGRP2Q7LDG7 609 aa24.85■■□□□ 1.57
VSX1-206ENST00000444511 ZNF589Q86UQ0 364 aaPredicted RBP24.85■■□□□ 1.57
VSX1-206ENST00000444511 FGD4Q96M96 766 aa24.85■■□□□ 1.57
VSX1-206ENST00000444511 PRR12Q9ULL5 1215 aa24.85■■□□□ 1.57
VSX1-206ENST00000444511 ZMYM6O95789 1325 aa24.85■■□□□ 1.57
VSX1-206ENST00000444511 CCDC171Q6TFL3 1326 aa24.85■■□□□ 1.57
VSX1-206ENST00000444511 ALAS1P13196 640 aa24.84■■□□□ 1.57
VSX1-206ENST00000444511 NOVP48745 357 aa24.84■■□□□ 1.57
VSX1-206ENST00000444511 ACLYP53396 1101 aa24.84■■□□□ 1.57
VSX1-206ENST00000444511 CNTN2Q02246 1040 aa24.84■■□□□ 1.57
VSX1-206ENST00000444511 Q7L0L9 218 aa24.84■■□□□ 1.57
VSX1-206ENST00000444511 CHD1LQ86WJ1 897 aa24.84■■□□□ 1.57
VSX1-206ENST00000444511 CCDC144CPQ8IYA2 1237 aa24.84■■□□□ 1.57
VSX1-206ENST00000444511 DCAF4Q8WV16 495 aa24.84■■□□□ 1.57
VSX1-206ENST00000444511 TRERF1Q96PN7 1200 aa24.84■■□□□ 1.57
VSX1-206ENST00000444511 A1CFQ9NQ94 594 aaKnown RBP24.84■■□□□ 1.57
VSX1-206ENST00000444511 SMCHD1A6NHR9 2005 aa24.84■■□□□ 1.57
VSX1-206ENST00000444511 MOXD2PA6NHM9 499 aa24.83■■□□□ 1.57
VSX1-206ENST00000444511 MFAP1P55081 439 aaKnown RBP24.83■■□□□ 1.57
VSX1-206ENST00000444511 SNAP25P60880 206 aa24.83■■□□□ 1.57
VSX1-206ENST00000444511 CCDC144BQ3MJ40 725 aa24.83■■□□□ 1.57
VSX1-206ENST00000444511 SH3RF1Q7Z6J0 888 aa24.83■■□□□ 1.57
VSX1-206ENST00000444511 FAM133AQ8N9E0 248 aa24.83■■□□□ 1.57
VSX1-206ENST00000444511 NUP133Q8WUM0 1156 aa24.83■■□□□ 1.57
VSX1-206ENST00000444511 BADQ92934 168 aa24.83■■□□□ 1.57
VSX1-206ENST00000444511 SPC25Q9HBM1 224 aa24.83■■□□□ 1.57
VSX1-206ENST00000444511 STARD7Q9NQZ5 370 aa24.83■■□□□ 1.57
VSX1-206ENST00000444511 TRIM43BA6NCK2 446 aa24.82■■□□□ 1.56
VSX1-206ENST00000444511 PQBP1O60828 265 aaKnown RBP24.82■■□□□ 1.56
VSX1-206ENST00000444511 CLTBP09497 229 aa24.82■■□□□ 1.56
VSX1-206ENST00000444511 TOP1P11387 765 aaKnown RBP24.82■■□□□ 1.56
VSX1-206ENST00000444511 HAND2P61296 217 aa24.82■■□□□ 1.56
VSX1-206ENST00000444511 KCNA10Q16322 511 aa24.82■■□□□ 1.56
VSX1-206ENST00000444511 KLHDC9Q8NEP7 349 aa24.82■■□□□ 1.56
VSX1-206ENST00000444511 TRIM43Q96BQ3 446 aaPredicted RBP24.82■■□□□ 1.56
VSX1-206ENST00000444511 IGHDP01880 384 aa24.81■■□□□ 1.56
VSX1-206ENST00000444511 C6orf222P0C671 652 aaPredicted RBP24.81■■□□□ 1.56
VSX1-206ENST00000444511 SDSP20132 328 aa24.81■■□□□ 1.56
VSX1-206ENST00000444511 NUCB1Q02818 461 aa24.81■■□□□ 1.56
VSX1-206ENST00000444511 PLEKHM2Q8IWE5 1019 aa24.81■■□□□ 1.56
VSX1-206ENST00000444511 EXOC6Q8TAG9 804 aa24.81■■□□□ 1.56
VSX1-206ENST00000444511 TMEM47Q9BQJ4 181 aa24.81■■□□□ 1.56
VSX1-206ENST00000444511 TCP11L1Q9NUJ3 509 aa24.81■■□□□ 1.56
VSX1-206ENST00000444511 CCPG1Q9ULG6 757 aa24.81■■□□□ 1.56
VSX1-206ENST00000444511 LTBP2Q14767 1821 aa24.81■■□□□ 1.56
VSX1-206ENST00000444511 MYADML2A6NDP7 307 aa24.8■■□□□ 1.56
VSX1-206ENST00000444511 ASB14A6NK59 587 aa24.8■■□□□ 1.56
VSX1-206ENST00000444511 MFSD6Q6ZSS7 791 aa24.8■■□□□ 1.56
VSX1-206ENST00000444511 PCSK9Q8NBP7 692 aaKnown RBP24.8■■□□□ 1.56
VSX1-206ENST00000444511 OSBPL3Q9H4L5 887 aa24.8■■□□□ 1.56
VSX1-206ENST00000444511 SOWAHBA6NEL2 793 aa24.79■■□□□ 1.56
VSX1-206ENST00000444511 ADCY6O43306 1168 aa24.79■■□□□ 1.56
VSX1-206ENST00000444511 PCP11498 1178 aaKnown RBP24.79■■□□□ 1.56
VSX1-206ENST00000444511 CST5P28325 142 aaPredicted RBP24.79■■□□□ 1.56
VSX1-206ENST00000444511 SLC16A2P36021 539 aa24.79■■□□□ 1.56
VSX1-206ENST00000444511 SHHQ15465 462 aa24.79■■□□□ 1.56
VSX1-206ENST00000444511 MUM1L1Q5H9M0 696 aa24.79■■□□□ 1.56
VSX1-206ENST00000444511 AKNAD1Q5T1N1 836 aa24.79■■□□□ 1.56
VSX1-206ENST00000444511 CCSAPQ6IQ19 270 aaPredicted RBP24.79■■□□□ 1.56
VSX1-206ENST00000444511 TTBK2Q6IQ55 1244 aa24.79■■□□□ 1.56
VSX1-206ENST00000444511 GLT1D1Q96MS3 346 aa24.79■■□□□ 1.56
VSX1-206ENST00000444511 RNF41Q9H4P4 317 aaPredicted RBP24.79■■□□□ 1.56
VSX1-206ENST00000444511 DCDC2CA8MYV0 355 aa24.78■■□□□ 1.56
VSX1-206ENST00000444511 ICAM1P05362 532 aa24.78■■□□□ 1.56
VSX1-206ENST00000444511 RAG1P15918 1043 aa24.78■■□□□ 1.56
VSX1-206ENST00000444511 GJA9P57773 515 aa24.78■■□□□ 1.56
VSX1-206ENST00000444511 SYDE2Q5VT97 1194 aa24.78■■□□□ 1.56
VSX1-206ENST00000444511 NSMFQ6X4W1 530 aa24.78■■□□□ 1.56
VSX1-206ENST00000444511 KATNBL1Q9H079 304 aa24.78■■□□□ 1.56
VSX1-206ENST00000444511 UPF3AQ9H1J1 476 aaKnown RBP24.78■■□□□ 1.56
VSX1-206ENST00000444511 RANBP17Q9H2T7 1088 aaKnown RBP24.78■■□□□ 1.56
VSX1-206ENST00000444511 GPCPD1Q9NPB8 672 aa24.78■■□□□ 1.56
VSX1-206ENST00000444511 DIAPH3Q9NSV4 1193 aa24.78■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms