RNA–Protein interactions for RNA: ENST00000436638.5

ECHDC1-208, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

APPRIS ALT2 TSL 3

Gene ECHDC1, Length 766 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-208ENST00000436638 PGBD3Q8N328 593 aa7.33□□□□□ -1.24
ECHDC1-208ENST00000436638 MIGA1Q8NAN2 632 aa7.33□□□□□ -1.24
ECHDC1-208ENST00000436638 GTPBP3Q969Y2 492 aaKnown RBP7.33□□□□□ -1.24
ECHDC1-208ENST00000436638 ZNF837Q96EG3 531 aaPredicted RBP7.33□□□□□ -1.24
ECHDC1-208ENST00000436638 CCDC97Q96F63 343 aaPredicted RBP7.33□□□□□ -1.24
ECHDC1-208ENST00000436638 GMCL1Q96IK5 515 aa7.33□□□□□ -1.24
ECHDC1-208ENST00000436638 PRMT6Q96LA8 375 aaPredicted RBP7.33□□□□□ -1.24
ECHDC1-208ENST00000436638 CRNKL1Q9BZJ0 848 aaKnown RBP7.33□□□□□ -1.24
ECHDC1-208ENST00000436638 NUCKS1Q9H1E3 243 aaKnown RBP7.33□□□□□ -1.24
ECHDC1-208ENST00000436638 GGA3Q9NZ52 723 aa7.33□□□□□ -1.24
ECHDC1-208ENST00000436638 ZNF70Q9UC06 446 aaPredicted RBP7.33□□□□□ -1.24
ECHDC1-208ENST00000436638 USP3Q9Y6I4 520 aa7.33□□□□□ -1.24
ECHDC1-208ENST00000436638 SCN4AP35499 1836 aa7.33□□□□□ -1.24
ECHDC1-208ENST00000436638 RFX7Q2KHR2 1363 aa7.33□□□□□ -1.24
ECHDC1-208ENST00000436638 AKAP11Q9UKA4 1901 aa7.33□□□□□ -1.24
ECHDC1-208ENST00000436638 SFI1A8K8P3 1242 aa7.32□□□□□ -1.24
ECHDC1-208ENST00000436638 TCP10L2B9ZVM9 353 aa7.32□□□□□ -1.24
ECHDC1-208ENST00000436638 GPR25O00155 361 aa7.32□□□□□ -1.24
ECHDC1-208ENST00000436638 NF2P35240 595 aa7.32□□□□□ -1.24
ECHDC1-208ENST00000436638 HIRAP54198 1017 aaPredicted RBP7.32□□□□□ -1.24
ECHDC1-208ENST00000436638 DYNLL1P63167 89 aaKnown RBP7.32□□□□□ -1.24
ECHDC1-208ENST00000436638 PICALMQ13492 652 aa7.32□□□□□ -1.24
ECHDC1-208ENST00000436638 MYBPC2Q14324 1141 aa7.32□□□□□ -1.24
ECHDC1-208ENST00000436638 MCMDC2Q4G0Z9 681 aa7.32□□□□□ -1.24
ECHDC1-208ENST00000436638 TBCELQ5QJ74 424 aa7.32□□□□□ -1.24
ECHDC1-208ENST00000436638 APOBEC3HQ6NTF7 200 aaKnown RBP7.32□□□□□ -1.24
ECHDC1-208ENST00000436638 CDC42EP5Q6NZY7 148 aa7.32□□□□□ -1.24
ECHDC1-208ENST00000436638 CDC37L1Q7L3B6 337 aa7.32□□□□□ -1.24
ECHDC1-208ENST00000436638 APBB1IPQ7Z5R6 666 aaPredicted RBP7.32□□□□□ -1.24
ECHDC1-208ENST00000436638 ZSCAN29Q8IWY8 852 aaPredicted RBP7.32□□□□□ -1.24
ECHDC1-208ENST00000436638 AMOTL1Q8IY63 956 aa7.32□□□□□ -1.24
ECHDC1-208ENST00000436638 NME8Q8N427 588 aa7.32□□□□□ -1.24
ECHDC1-208ENST00000436638 SMC1BQ8NDV3 1235 aa7.32□□□□□ -1.24
ECHDC1-208ENST00000436638 RUBCNLQ9H714 662 aa7.32□□□□□ -1.24
ECHDC1-208ENST00000436638 HELLSQ9NRZ9 838 aa7.32□□□□□ -1.24
ECHDC1-208ENST00000436638 SCHIP1Q9P0W5 487 aaPredicted RBP7.32□□□□□ -1.24
ECHDC1-208ENST00000436638 PCDHAC2Q9Y5I4 1007 aa7.32□□□□□ -1.24
ECHDC1-208ENST00000436638 PITPNM2Q9BZ72 1349 aa7.31□□□□□ -1.24
ECHDC1-208ENST00000436638 MAST2Q6P0Q8 1798 aa7.31□□□□□ -1.24
ECHDC1-208ENST00000436638 TCRBV5S4A2TA0A5A2 114 aa7.31□□□□□ -1.24
ECHDC1-208ENST00000436638 ENTPD3O75355 529 aa7.31□□□□□ -1.24
ECHDC1-208ENST00000436638 CDC45O75419 566 aa7.31□□□□□ -1.24
ECHDC1-208ENST00000436638 TOMM70O94826 608 aa7.31□□□□□ -1.24
ECHDC1-208ENST00000436638 MBD4O95243 580 aa7.31□□□□□ -1.24
ECHDC1-208ENST00000436638 EGFRP00533 1210 aa7.31□□□□□ -1.24
ECHDC1-208ENST00000436638 APPP05067 770 aa7.31□□□□□ -1.24
ECHDC1-208ENST00000436638 GNAT2P19087 354 aa7.31□□□□□ -1.24
ECHDC1-208ENST00000436638 KRT76Q01546 638 aa7.31□□□□□ -1.24
ECHDC1-208ENST00000436638 TCP10Q12799 353 aa7.31□□□□□ -1.24
ECHDC1-208ENST00000436638 NMIQ13287 307 aaPredicted RBP7.31□□□□□ -1.24
ECHDC1-208ENST00000436638 RNFT1Q5M7Z0 435 aa7.31□□□□□ -1.24
ECHDC1-208ENST00000436638 ZMYM1Q5SVZ6 1142 aa7.31□□□□□ -1.24
ECHDC1-208ENST00000436638 CWC27Q6UX04 472 aaKnown RBP7.31□□□□□ -1.24
ECHDC1-208ENST00000436638 KIAA1211Q6ZU35 1233 aa7.31□□□□□ -1.24
ECHDC1-208ENST00000436638 KRT26Q7Z3Y9 468 aa7.31□□□□□ -1.24
ECHDC1-208ENST00000436638 ADGRA1Q86SQ6 560 aa7.31□□□□□ -1.24
ECHDC1-208ENST00000436638 RETREG2Q8NC44 543 aa7.31□□□□□ -1.24
ECHDC1-208ENST00000436638 SH3RF3Q8TEJ3 882 aaPredicted RBP7.31□□□□□ -1.24
ECHDC1-208ENST00000436638 HOOK2Q96ED9 719 aa7.31□□□□□ -1.24
ECHDC1-208ENST00000436638 ZBED3Q96IU2 234 aaPredicted RBP7.31□□□□□ -1.24
ECHDC1-208ENST00000436638 TRERF1Q96PN7 1200 aa7.31□□□□□ -1.24
ECHDC1-208ENST00000436638 NACAP1Q9BZK3 213 aa7.31□□□□□ -1.24
ECHDC1-208ENST00000436638 ARMT1Q9H993 441 aa7.31□□□□□ -1.24
ECHDC1-208ENST00000436638 PPP2R3BQ9Y5P8 575 aa7.31□□□□□ -1.24
ECHDC1-208ENST00000436638 SLC4A4Q9Y6R1 1079 aa7.31□□□□□ -1.24
ECHDC1-208ENST00000436638 RAD50Q92878 1312 aa7.3□□□□□ -1.24
ECHDC1-208ENST00000436638 GPAA1O43292 621 aa7.3□□□□□ -1.24
ECHDC1-208ENST00000436638 HLA-DOAP06340 250 aa7.3□□□□□ -1.24
ECHDC1-208ENST00000436638 CHMLP26374 656 aa7.3□□□□□ -1.24
ECHDC1-208ENST00000436638 CACNB3P54284 484 aa7.3□□□□□ -1.24
ECHDC1-208ENST00000436638 RHBDL3P58872 404 aa7.3□□□□□ -1.24
ECHDC1-208ENST00000436638 IRX3P78415 501 aaPredicted RBP7.3□□□□□ -1.24
ECHDC1-208ENST00000436638 RASA3Q14644 834 aa7.3□□□□□ -1.24
ECHDC1-208ENST00000436638 CRTC2Q53ET0 693 aaPredicted RBP7.3□□□□□ -1.24
ECHDC1-208ENST00000436638 FKBP1CQ5VVH2 108 aa7.3□□□□□ -1.24
ECHDC1-208ENST00000436638 MAP1SQ66K74 1059 aaPredicted RBP7.3□□□□□ -1.24
ECHDC1-208ENST00000436638 USP48Q86UV5 1035 aa7.3□□□□□ -1.24
ECHDC1-208ENST00000436638 FAM83AQ86UY5 434 aa7.3□□□□□ -1.24
ECHDC1-208ENST00000436638 SLC9A9Q8IVB4 645 aa7.3□□□□□ -1.24
ECHDC1-208ENST00000436638 MAPKAPK5Q8IW41 473 aa7.3□□□□□ -1.24
ECHDC1-208ENST00000436638 SIX5Q8N196 739 aa7.3□□□□□ -1.24
ECHDC1-208ENST00000436638 LCORLQ8N3X6 602 aa7.3□□□□□ -1.24
ECHDC1-208ENST00000436638 ZSCAN1Q8NBB4 408 aa7.3□□□□□ -1.24
ECHDC1-208ENST00000436638 TSEN2Q8NCE0 465 aaKnown RBP7.3□□□□□ -1.24
ECHDC1-208ENST00000436638 ZNF384Q8TF68 577 aa7.3□□□□□ -1.24
ECHDC1-208ENST00000436638 TGFBRAP1Q8WUH2 860 aa7.3□□□□□ -1.24
ECHDC1-208ENST00000436638 FAM151AQ8WW52 585 aa7.3□□□□□ -1.24
ECHDC1-208ENST00000436638 OSBP2Q969R2 916 aa7.3□□□□□ -1.24
ECHDC1-208ENST00000436638 FAM227BQ96M60 508 aa7.3□□□□□ -1.24
ECHDC1-208ENST00000436638 RIOK1Q9BRS2 568 aaKnown RBP7.3□□□□□ -1.24
ECHDC1-208ENST00000436638 IDI2Q9BXS1 227 aa7.3□□□□□ -1.24
ECHDC1-208ENST00000436638 UBA5Q9GZZ9 404 aa7.3□□□□□ -1.24
ECHDC1-208ENST00000436638 PUS7LQ9H0K6 701 aaKnown RBP7.3□□□□□ -1.24
ECHDC1-208ENST00000436638 PGAP2Q9UHJ9 254 aa7.3□□□□□ -1.24
ECHDC1-208ENST00000436638 MYH2Q9UKX2 1941 aa7.3□□□□□ -1.24
ECHDC1-208ENST00000436638 ASTN2O75129 1339 aaPredicted RBP7.29□□□□□ -1.24
ECHDC1-208ENST00000436638 CCDC171Q6TFL3 1326 aa7.29□□□□□ -1.24
ECHDC1-208ENST00000436638 ZNF646O15015 1829 aaPredicted RBP7.29□□□□□ -1.24
ECHDC1-208ENST00000436638 DOCK2Q92608 1830 aa7.29□□□□□ -1.24
ECHDC1-208ENST00000436638 ADM5C9JUS6 153 aa7.29□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms