RNA–Protein interactions for RNA: ENST00000434472.6

CD44-210, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 1,634 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-210ENST00000434472 RHOBTB3O94955 611 aa11.74□□□□□ -0.53
CD44-210ENST00000434472 OR52Z1P0C646 297 aa11.74□□□□□ -0.53
CD44-210ENST00000434472 NOVP48745 357 aa11.74□□□□□ -0.53
CD44-210ENST00000434472 INF2Q27J81 1249 aa11.74□□□□□ -0.53
CD44-210ENST00000434472 SLC4A8Q2Y0W8 1093 aa11.74□□□□□ -0.53
CD44-210ENST00000434472 ARHGAP29Q52LW3 1261 aa11.74□□□□□ -0.53
CD44-210ENST00000434472 CYP26C1Q6V0L0 522 aa11.74□□□□□ -0.53
CD44-210ENST00000434472 RASGRP2Q7LDG7 609 aa11.74□□□□□ -0.53
CD44-210ENST00000434472 AMIGO3Q86WK7 504 aa11.74□□□□□ -0.53
CD44-210ENST00000434472 CRAMP1Q96RY5 1269 aa11.74□□□□□ -0.53
CD44-210ENST00000434472 CARD6Q9BX69 1037 aa11.74□□□□□ -0.53
CD44-210ENST00000434472 KBTBD4Q9NVX7 518 aa11.74□□□□□ -0.53
CD44-210ENST00000434472 FAM53CQ9NYF3 392 aa11.74□□□□□ -0.53
CD44-210ENST00000434472 MRFAP1Q9Y605 127 aa11.74□□□□□ -0.53
CD44-210ENST00000434472 GAKO14976 1311 aa11.73□□□□□ -0.53
CD44-210ENST00000434472 SNED1Q8TER0 1413 aa11.73□□□□□ -0.53
CD44-210ENST00000434472 A0A1W2PQC6 194 aa11.73□□□□□ -0.53
CD44-210ENST00000434472 ADAMTS3O15072 1205 aa11.73□□□□□ -0.53
CD44-210ENST00000434472 ATP8B1O43520 1251 aa11.73□□□□□ -0.53
CD44-210ENST00000434472 SERPINB2P05120 415 aa11.73□□□□□ -0.53
CD44-210ENST00000434472 HOXA10P31260 410 aaPredicted RBP11.73□□□□□ -0.53
CD44-210ENST00000434472 CASP14P31944 242 aa11.73□□□□□ -0.53
CD44-210ENST00000434472 PRCPP42785 496 aa11.73□□□□□ -0.53
CD44-210ENST00000434472 AMPD3Q01432 767 aa11.73□□□□□ -0.53
CD44-210ENST00000434472 DMTNQ08495 405 aa11.73□□□□□ -0.53
CD44-210ENST00000434472 GRIK5Q16478 980 aa11.73□□□□□ -0.53
CD44-210ENST00000434472 SLC35G1Q2M3R5 365 aa11.73□□□□□ -0.53
CD44-210ENST00000434472 TYW1BQ6NUM6 668 aa11.73□□□□□ -0.53
CD44-210ENST00000434472 NEK8Q86SG6 692 aa11.73□□□□□ -0.53
CD44-210ENST00000434472 CABP7Q86V35 215 aa11.73□□□□□ -0.53
CD44-210ENST00000434472 RASGRP4Q8TDF6 673 aa11.73□□□□□ -0.53
CD44-210ENST00000434472 CPLX3Q8WVH0 158 aa11.73□□□□□ -0.53
CD44-210ENST00000434472 DHTKD1Q96HY7 919 aaPredicted RBP11.73□□□□□ -0.53
CD44-210ENST00000434472 ZMYND15Q9H091 742 aa11.73□□□□□ -0.53
CD44-210ENST00000434472 MYO1AQ9UBC5 1043 aa11.73□□□□□ -0.53
CD44-210ENST00000434472 MAGEC2Q9UBF1 373 aaPredicted RBP11.73□□□□□ -0.53
CD44-210ENST00000434472 SUGT1Q9Y2Z0 365 aa11.73□□□□□ -0.53
CD44-210ENST00000434472 FLT1P17948 1338 aa11.73□□□□□ -0.53
CD44-210ENST00000434472 BICDL2A1A5D9 508 aa11.72□□□□□ -0.53
CD44-210ENST00000434472 SMCO2A6NFE2 343 aa11.72□□□□□ -0.53
CD44-210ENST00000434472 SOWAHDA6NJG2 315 aa11.72□□□□□ -0.53
CD44-210ENST00000434472 UBAP1LF5GYI3 381 aa11.72□□□□□ -0.53
CD44-210ENST00000434472 GYPCP04921 128 aa11.72□□□□□ -0.53
CD44-210ENST00000434472 CCT6AP40227 531 aaKnown RBP11.72□□□□□ -0.53
CD44-210ENST00000434472 RHBDL3P58872 404 aa11.72□□□□□ -0.53
CD44-210ENST00000434472 FAM193AP78312 1265 aa11.72□□□□□ -0.53
CD44-210ENST00000434472 PPP2R3AQ06190 1150 aa11.72□□□□□ -0.53
CD44-210ENST00000434472 JAKMIP3Q5VZ66 844 aa11.72□□□□□ -0.53
CD44-210ENST00000434472 TMCO3Q6UWJ1 677 aa11.72□□□□□ -0.53
CD44-210ENST00000434472 RAD9BQ6WBX8 426 aa11.72□□□□□ -0.53
CD44-210ENST00000434472 FAM114A1Q8IWE2 563 aa11.72□□□□□ -0.53
CD44-210ENST00000434472 GPR161Q8N6U8 529 aaKnown RBP11.72□□□□□ -0.53
CD44-210ENST00000434472 SLC44A5Q8NCS7 719 aa11.72□□□□□ -0.53
CD44-210ENST00000434472 GIMAP8Q8ND71 665 aaPredicted RBP11.72□□□□□ -0.53
CD44-210ENST00000434472 FBXO41Q8TF61 875 aa11.72□□□□□ -0.53
CD44-210ENST00000434472 KIFC2Q96AC6 838 aa11.72□□□□□ -0.53
CD44-210ENST00000434472 VPS16Q9H269 839 aa11.72□□□□□ -0.53
CD44-210ENST00000434472 TMEM60Q9H2L4 133 aa11.72□□□□□ -0.53
CD44-210ENST00000434472 TAB2Q9NYJ8 693 aa11.72□□□□□ -0.53
CD44-210ENST00000434472 PLIN4Q96Q06 1357 aa11.72□□□□□ -0.53
CD44-210ENST00000434472 DDX60LQ5H9U9 1706 aaKnown RBP11.71□□□□□ -0.53
CD44-210ENST00000434472 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.71□□□□□ -0.53
CD44-210ENST00000434472 ASPRV1Q53RT3 343 aa11.71□□□□□ -0.53
CD44-210ENST00000434472 NAALADL2Q58DX5 795 aa11.71□□□□□ -0.53
CD44-210ENST00000434472 MFSD14BQ5SR56 506 aa11.71□□□□□ -0.53
CD44-210ENST00000434472 CALML4Q96GE6 196 aa11.71□□□□□ -0.53
CD44-210ENST00000434472 GJD4Q96KN9 370 aaPredicted RBP11.71□□□□□ -0.53
CD44-210ENST00000434472 WDR24Q96S15 920 aa11.71□□□□□ -0.53
CD44-210ENST00000434472 NUP88Q99567 741 aaPredicted RBP11.71□□□□□ -0.53
CD44-210ENST00000434472 C7orf25Q9BPX7 421 aa11.71□□□□□ -0.53
CD44-210ENST00000434472 DESI2Q9BSY9 194 aa11.71□□□□□ -0.53
CD44-210ENST00000434472 MRPL44Q9H9J2 332 aaKnown RBP11.71□□□□□ -0.53
CD44-210ENST00000434472 ABHD10Q9NUJ1 306 aa11.71□□□□□ -0.53
CD44-210ENST00000434472 GDAQ9Y2T3 454 aa11.71□□□□□ -0.53
CD44-210ENST00000434472 LGALS16A8MUM7 142 aa11.71□□□□□ -0.54
CD44-210ENST00000434472 POTEB2H3BUK9 544 aa11.71□□□□□ -0.54
CD44-210ENST00000434472 KLRC4O43908 158 aa11.71□□□□□ -0.54
CD44-210ENST00000434472 GOLGA8HP0CJ92 632 aa11.71□□□□□ -0.54
CD44-210ENST00000434472 GYS1P13807 737 aa11.71□□□□□ -0.54
CD44-210ENST00000434472 ZSCAN20P17040 1043 aaPredicted RBP11.71□□□□□ -0.54
CD44-210ENST00000434472 FXR1P51114 621 aaKnown RBP eCLIP11.71□□□□□ -0.54
CD44-210ENST00000434472 UBXN1Q04323 297 aa11.71□□□□□ -0.54
CD44-210ENST00000434472 MTF1Q14872 753 aa11.71□□□□□ -0.54
CD44-210ENST00000434472 TSR1Q2NL82 804 aaKnown RBP11.71□□□□□ -0.54
CD44-210ENST00000434472 COBLL1Q53SF7 1204 aa11.71□□□□□ -0.54
CD44-210ENST00000434472 SLC27A3Q5K4L6 730 aa11.71□□□□□ -0.54
CD44-210ENST00000434472 PPP1R18Q6NYC8 613 aa11.71□□□□□ -0.54
CD44-210ENST00000434472 MB21D1Q8N884 522 aa11.71□□□□□ -0.54
CD44-210ENST00000434472 CEP112Q8N8E3 955 aa11.71□□□□□ -0.54
CD44-210ENST00000434472 TBC1D16Q8TBP0 767 aa11.71□□□□□ -0.54
CD44-210ENST00000434472 RABGGTAQ92696 567 aa11.71□□□□□ -0.54
CD44-210ENST00000434472 GOLGA1Q92805 767 aa11.71□□□□□ -0.54
CD44-210ENST00000434472 IQCDQ96DY2 449 aa11.71□□□□□ -0.54
CD44-210ENST00000434472 TRIM47Q96LD4 638 aa11.71□□□□□ -0.54
CD44-210ENST00000434472 GPR101Q96P66 508 aaPredicted RBP11.71□□□□□ -0.54
CD44-210ENST00000434472 NUP58Q9BVL2 599 aa11.71□□□□□ -0.54
CD44-210ENST00000434472 LRRC27Q9C0I9 530 aa11.71□□□□□ -0.54
CD44-210ENST00000434472 RIOX1Q9H6W3 641 aa11.71□□□□□ -0.54
CD44-210ENST00000434472 EXOC1Q9NV70 894 aa11.71□□□□□ -0.54
CD44-210ENST00000434472 C10orf71Q711Q0 1435 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 70.6 ms