RNA–Protein interactions for RNA: ENST00000431611.5

CSNK1E-208, Transcript of casein kinase 1 epsilon, humanhuman

TSL 5

Gene CSNK1E, Length 814 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-208ENST00000431611 LTBP2Q14767 1821 aa17.97■□□□□ 0.47
CSNK1E-208ENST00000431611 ZNFX1Q9P2E3 1918 aaKnown RBP17.96■□□□□ 0.47
CSNK1E-208ENST00000431611 TSPY2A6NKD2 308 aa17.96■□□□□ 0.47
CSNK1E-208ENST00000431611 DCDC2CA8MYV0 355 aa17.96■□□□□ 0.47
CSNK1E-208ENST00000431611 C6orf222P0C671 652 aaPredicted RBP17.96■□□□□ 0.47
CSNK1E-208ENST00000431611 MCCP23508 829 aa17.96■□□□□ 0.47
CSNK1E-208ENST00000431611 SLC1A4P43007 532 aa17.96■□□□□ 0.47
CSNK1E-208ENST00000431611 FAAP100Q0VG06 881 aa17.96■□□□□ 0.47
CSNK1E-208ENST00000431611 CCDC144BQ3MJ40 725 aa17.96■□□□□ 0.47
CSNK1E-208ENST00000431611 CCSAPQ6IQ19 270 aaPredicted RBP17.96■□□□□ 0.47
CSNK1E-208ENST00000431611 CCDC129Q6ZRS4 1044 aa17.96■□□□□ 0.47
CSNK1E-208ENST00000431611 ARMCX2Q7L311 632 aa17.96■□□□□ 0.47
CSNK1E-208ENST00000431611 CHMP4CQ96CF2 233 aa17.96■□□□□ 0.47
CSNK1E-208ENST00000431611 GLT1D1Q96MS3 346 aa17.96■□□□□ 0.47
CSNK1E-208ENST00000431611 ACAD9Q9H845 621 aa17.96■□□□□ 0.47
CSNK1E-208ENST00000431611 SPC25Q9HBM1 224 aa17.96■□□□□ 0.47
CSNK1E-208ENST00000431611 STX8Q9UNK0 236 aa17.96■□□□□ 0.47
CSNK1E-208ENST00000431611 DDX52Q9Y2R4 599 aaKnown RBP eCLIP17.96■□□□□ 0.47
CSNK1E-208ENST00000431611 MYADML2A6NDP7 307 aa17.95■□□□□ 0.46
CSNK1E-208ENST00000431611 FOXP2O15409 715 aa17.95■□□□□ 0.46
CSNK1E-208ENST00000431611 CST5P28325 142 aaPredicted RBP17.95■□□□□ 0.46
CSNK1E-208ENST00000431611 EPHB4P54760 987 aa17.95■□□□□ 0.46
CSNK1E-208ENST00000431611 IRX5P78411 483 aaPredicted RBP17.95■□□□□ 0.46
CSNK1E-208ENST00000431611 SMAD3P84022 425 aaKnown RBP17.95■□□□□ 0.46
CSNK1E-208ENST00000431611 CTDSPL2Q05D32 466 aa17.95■□□□□ 0.46
CSNK1E-208ENST00000431611 CCDC144CPQ8IYA2 1237 aa17.95■□□□□ 0.46
CSNK1E-208ENST00000431611 PCSK9Q8NBP7 692 aaKnown RBP17.95■□□□□ 0.46
CSNK1E-208ENST00000431611 AGBL1Q96MI9 1066 aa17.95■□□□□ 0.46
CSNK1E-208ENST00000431611 RNF146Q9NTX7 359 aa17.95■□□□□ 0.46
CSNK1E-208ENST00000431611 ELP1O95163 1332 aa17.95■□□□□ 0.46
CSNK1E-208ENST00000431611 PLXNA1Q9UIW2 1896 aa17.95■□□□□ 0.46
CSNK1E-208ENST00000431611 ADCY6O43306 1168 aa17.94■□□□□ 0.46
CSNK1E-208ENST00000431611 PLA2G6O60733 806 aa17.94■□□□□ 0.46
CSNK1E-208ENST00000431611 ASGR1P07306 291 aa17.94■□□□□ 0.46
CSNK1E-208ENST00000431611 GJA9P57773 515 aa17.94■□□□□ 0.46
CSNK1E-208ENST00000431611 CNTN2Q02246 1040 aa17.94■□□□□ 0.46
CSNK1E-208ENST00000431611 FPGSQ05932 587 aa17.94■□□□□ 0.46
CSNK1E-208ENST00000431611 TKFCQ3LXA3 575 aa17.94■□□□□ 0.46
CSNK1E-208ENST00000431611 ANKRD45Q5TZF3 282 aa17.94■□□□□ 0.46
CSNK1E-208ENST00000431611 RCSD1Q6JBY9 416 aa17.94■□□□□ 0.46
CSNK1E-208ENST00000431611 KCTD1Q719H9 257 aa17.94■□□□□ 0.46
CSNK1E-208ENST00000431611 FAM133AQ8N9E0 248 aa17.94■□□□□ 0.46
CSNK1E-208ENST00000431611 RNPC3Q96LT9 517 aaKnown RBP17.94■□□□□ 0.46
CSNK1E-208ENST00000431611 SEMA6BQ9H3T3 888 aa17.94■□□□□ 0.46
CSNK1E-208ENST00000431611 INCENPQ9NQS7 918 aa17.94■□□□□ 0.46
CSNK1E-208ENST00000431611 SMCHD1A6NHR9 2005 aa17.94■□□□□ 0.46
CSNK1E-208ENST00000431611 ZNF536O15090 1300 aa17.94■□□□□ 0.46
CSNK1E-208ENST00000431611 SALL3Q9BXA9 1300 aa17.94■□□□□ 0.46
CSNK1E-208ENST00000431611 GNASQ5JWF2 1037 aa17.93■□□□□ 0.46
CSNK1E-208ENST00000431611 VPS53Q5VIR6 699 aa17.93■□□□□ 0.46
CSNK1E-208ENST00000431611 VTI1AQ96AJ9 217 aa17.93■□□□□ 0.46
CSNK1E-208ENST00000431611 EVI5LQ96CN4 794 aa17.93■□□□□ 0.46
CSNK1E-208ENST00000431611 TRERF1Q96PN7 1200 aa17.93■□□□□ 0.46
CSNK1E-208ENST00000431611 CDX2Q99626 313 aaPredicted RBP17.93■□□□□ 0.46
CSNK1E-208ENST00000431611 KATNBL1Q9H079 304 aa17.93■□□□□ 0.46
CSNK1E-208ENST00000431611 UPF3AQ9H1J1 476 aaKnown RBP17.93■□□□□ 0.46
CSNK1E-208ENST00000431611 A1CFQ9NQ94 594 aaKnown RBP17.93■□□□□ 0.46
CSNK1E-208ENST00000431611 IL17RBQ9NRM6 502 aa17.93■□□□□ 0.46
CSNK1E-208ENST00000431611 RANBP6O60518 1105 aaKnown RBP17.92■□□□□ 0.46
CSNK1E-208ENST00000431611 NMT2O60551 498 aa17.92■□□□□ 0.46
CSNK1E-208ENST00000431611 ALAS1P13196 640 aa17.92■□□□□ 0.46
CSNK1E-208ENST00000431611 CDK7P50613 346 aa17.92■□□□□ 0.46
CSNK1E-208ENST00000431611 RRP1P56182 461 aaKnown RBP17.92■□□□□ 0.46
CSNK1E-208ENST00000431611 CCDC174Q6PII3 467 aa17.92■□□□□ 0.46
CSNK1E-208ENST00000431611 ANAPC4Q9UJX5 808 aa17.92■□□□□ 0.46
CSNK1E-208ENST00000431611 PRR12Q9ULL5 1215 aa17.92■□□□□ 0.46
CSNK1E-208ENST00000431611 MROH7Q68CQ1 1323 aa17.92■□□□□ 0.46
CSNK1E-208ENST00000431611 SOWAHBA6NEL2 793 aa17.91■□□□□ 0.46
CSNK1E-208ENST00000431611 ASB14A6NK59 587 aa17.91■□□□□ 0.46
CSNK1E-208ENST00000431611 TIMP1P01033 207 aa17.91■□□□□ 0.46
CSNK1E-208ENST00000431611 SNAP25P60880 206 aa17.91■□□□□ 0.46
CSNK1E-208ENST00000431611 TNFAIP2Q03169 654 aa17.91■□□□□ 0.46
CSNK1E-208ENST00000431611 NOL8Q76FK4 1167 aaKnown RBP17.91■□□□□ 0.46
CSNK1E-208ENST00000431611 PHF6Q8IWS0 365 aaKnown RBP eCLIP17.91■□□□□ 0.46
CSNK1E-208ENST00000431611 HELLSQ9NRZ9 838 aa17.91■□□□□ 0.46
CSNK1E-208ENST00000431611 TBX21Q9UL17 535 aa17.91■□□□□ 0.46
CSNK1E-208ENST00000431611 MTMR7Q9Y216 660 aa17.91■□□□□ 0.46
CSNK1E-208ENST00000431611 MYH4Q9Y623 1939 aa17.9■□□□□ 0.46
CSNK1E-208ENST00000431611 A0A0U1RQG5 324 aaPredicted RBP17.9■□□□□ 0.46
CSNK1E-208ENST00000431611 ARVCFO00192 962 aa17.9■□□□□ 0.46
CSNK1E-208ENST00000431611 ORC4O43929 436 aa17.9■□□□□ 0.46
CSNK1E-208ENST00000431611 PDE1AP54750 535 aa17.9■□□□□ 0.46
CSNK1E-208ENST00000431611 ALX1Q15699 326 aa17.9■□□□□ 0.46
CSNK1E-208ENST00000431611 CRBNQ96SW2 442 aa17.9■□□□□ 0.46
CSNK1E-208ENST00000431611 TTYH1Q9H313 450 aaPredicted RBP17.9■□□□□ 0.46
CSNK1E-208ENST00000431611 C11orf97A0A1B0GVM6 126 aaPredicted RBP17.89■□□□□ 0.45
CSNK1E-208ENST00000431611 CTAGE5O15320 804 aa17.89■□□□□ 0.45
CSNK1E-208ENST00000431611 NOVP48745 357 aa17.89■□□□□ 0.45
CSNK1E-208ENST00000431611 NKX3-2P78367 333 aa17.89■□□□□ 0.45
CSNK1E-208ENST00000431611 BEX3Q00994 111 aa17.89■□□□□ 0.45
CSNK1E-208ENST00000431611 CCDC96Q2M329 555 aa17.89■□□□□ 0.45
CSNK1E-208ENST00000431611 MUM1L1Q5H9M0 696 aa17.89■□□□□ 0.45
CSNK1E-208ENST00000431611 MFSD5Q6N075 450 aa17.89■□□□□ 0.45
CSNK1E-208ENST00000431611 RASGRP2Q7LDG7 609 aa17.89■□□□□ 0.45
CSNK1E-208ENST00000431611 DCAF4Q8WV16 495 aa17.89■□□□□ 0.45
CSNK1E-208ENST00000431611 TOMM22Q9NS69 142 aa17.89■□□□□ 0.45
CSNK1E-208ENST00000431611 CCPG1Q9ULG6 757 aa17.89■□□□□ 0.45
CSNK1E-208ENST00000431611 TMEM265A0A087WTH1 108 aa17.88■□□□□ 0.45
CSNK1E-208ENST00000431611 HSFX4A0A1B0GTS1 333 aaPredicted RBP17.88■□□□□ 0.45
CSNK1E-208ENST00000431611 HSFX3A0A1B0GWH4 333 aaPredicted RBP17.88■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 79.2 ms