RNA–Protein interactions for RNA: ENST00000428287.6

RIF1-203, Transcript of replication timing regulatory factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RIF1, Length 7,722 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-203ENST00000428287 SEC31BQ9NQW1 1179 aa5.73□□□□□ -1.49
RIF1-203ENST00000428287 TPX2Q9ULW0 747 aaKnown RBP5.73□□□□□ -1.49
RIF1-203ENST00000428287 DOCK6Q96HP0 2047 aa5.73□□□□□ -1.49
RIF1-203ENST00000428287 KLF18A0A0U1RQI7 1052 aa5.73□□□□□ -1.49
RIF1-203ENST00000428287 LIN7AO14910 233 aaPredicted RBP5.73□□□□□ -1.49
RIF1-203ENST00000428287 ATP1A1P05023 1023 aaKnown RBP5.73□□□□□ -1.49
RIF1-203ENST00000428287 MYL1P05976 194 aa5.73□□□□□ -1.49
RIF1-203ENST00000428287 DPYDQ12882 1025 aa5.73□□□□□ -1.49
RIF1-203ENST00000428287 KCNB1Q14721 858 aa5.73□□□□□ -1.49
RIF1-203ENST00000428287 PTGISQ16647 500 aa5.73□□□□□ -1.49
RIF1-203ENST00000428287 ZIM3Q96PE6 472 aa5.73□□□□□ -1.49
RIF1-203ENST00000428287 CORO1CQ9ULV4 474 aaPredicted RBP5.73□□□□□ -1.49
RIF1-203ENST00000428287 SYNRGQ9UMZ2 1314 aa5.73□□□□□ -1.49
RIF1-203ENST00000428287 KIF26BQ2KJY2 2108 aa5.73□□□□□ -1.49
RIF1-203ENST00000428287 GOLGA8BA8MQT2 603 aa5.73□□□□□ -1.49
RIF1-203ENST00000428287 BTBD18B2RXH4 712 aa5.73□□□□□ -1.49
RIF1-203ENST00000428287 ZBED6P86452 979 aa5.73□□□□□ -1.49
RIF1-203ENST00000428287 TXNDC2Q86VQ3 553 aa5.73□□□□□ -1.49
RIF1-203ENST00000428287 DRAXINQ8NBI3 349 aaPredicted RBP5.73□□□□□ -1.49
RIF1-203ENST00000428287 NECTIN2Q92692 538 aa5.73□□□□□ -1.49
RIF1-203ENST00000428287 FAM210AQ96ND0 272 aa5.73□□□□□ -1.49
RIF1-203ENST00000428287 PCDHGC5Q9Y5F6 944 aa5.73□□□□□ -1.49
RIF1-203ENST00000428287 LRP5O75197 1615 aa5.73□□□□□ -1.49
RIF1-203ENST00000428287 GMNCA6NCL1 334 aa5.73□□□□□ -1.49
RIF1-203ENST00000428287 MMP1P03956 469 aa5.73□□□□□ -1.49
RIF1-203ENST00000428287 ANXA1P04083 346 aa5.73□□□□□ -1.49
RIF1-203ENST00000428287 MYBP10242 640 aa5.73□□□□□ -1.49
RIF1-203ENST00000428287 GNGT1P63211 74 aa5.73□□□□□ -1.49
RIF1-203ENST00000428287 OTUD7BQ6GQQ9 843 aa5.73□□□□□ -1.49
RIF1-203ENST00000428287 ATG9AQ7Z3C6 839 aa5.73□□□□□ -1.49
RIF1-203ENST00000428287 SMCR8Q8TEV9 937 aaPredicted RBP5.73□□□□□ -1.49
RIF1-203ENST00000428287 ZNF512BQ96KM6 892 aaPredicted RBP5.73□□□□□ -1.49
RIF1-203ENST00000428287 LGR6Q9HBX8 967 aa5.73□□□□□ -1.49
RIF1-203ENST00000428287 SLC40A1Q9NP59 571 aa5.73□□□□□ -1.49
RIF1-203ENST00000428287 ANKIB1Q9P2G1 1089 aa5.73□□□□□ -1.49
RIF1-203ENST00000428287 PSME4Q14997 1843 aa5.73□□□□□ -1.49
RIF1-203ENST00000428287 CPLX1O14810 134 aa5.73□□□□□ -1.49
RIF1-203ENST00000428287 PPP2R5AQ15172 486 aa5.73□□□□□ -1.49
RIF1-203ENST00000428287 TTI2Q6NXR4 508 aa5.73□□□□□ -1.49
RIF1-203ENST00000428287 CCDC129Q6ZRS4 1044 aa5.73□□□□□ -1.49
RIF1-203ENST00000428287 PLCB1Q9NQ66 1216 aa5.73□□□□□ -1.49
RIF1-203ENST00000428287 RWDD2AQ9UIY3 292 aa5.73□□□□□ -1.49
RIF1-203ENST00000428287 LRRC42Q9Y546 428 aa5.73□□□□□ -1.49
RIF1-203ENST00000428287 PNPLA7Q6ZV29 1317 aa5.73□□□□□ -1.49
RIF1-203ENST00000428287 RCCD1A6NED2 376 aa5.73□□□□□ -1.49
RIF1-203ENST00000428287 RASSF10A6NK89 507 aa5.73□□□□□ -1.49
RIF1-203ENST00000428287 B4DLN1 442 aa5.73□□□□□ -1.49
RIF1-203ENST00000428287 GHRP10912 638 aa5.73□□□□□ -1.49
RIF1-203ENST00000428287 FUT2Q10981 343 aa5.73□□□□□ -1.49
RIF1-203ENST00000428287 NCOA7Q8NI08 942 aa5.73□□□□□ -1.49
RIF1-203ENST00000428287 DOCK8Q8NF50 2099 aa5.72□□□□□ -1.49
RIF1-203ENST00000428287 A0A0G2JLW4 131 aa5.72□□□□□ -1.49
RIF1-203ENST00000428287 CES2O00748 559 aa5.72□□□□□ -1.49
RIF1-203ENST00000428287 KIF5AQ12840 1032 aa5.72□□□□□ -1.49
RIF1-203ENST00000428287 RBBP5Q15291 538 aaKnown RBP5.72□□□□□ -1.49
RIF1-203ENST00000428287 TTC39AQ5SRH9 613 aa5.72□□□□□ -1.49
RIF1-203ENST00000428287 WDR87Q6ZQQ6 2873 aa5.72□□□□□ -1.49
RIF1-203ENST00000428287 ZNF473Q8WTR7 871 aaKnown RBP5.72□□□□□ -1.49
RIF1-203ENST00000428287 CYFIP2Q96F07 1278 aa5.72□□□□□ -1.49
RIF1-203ENST00000428287 HDAC6Q9UBN7 1215 aa5.72□□□□□ -1.49
RIF1-203ENST00000428287 XDHP47989 1333 aa5.72□□□□□ -1.49
RIF1-203ENST00000428287 SOS2Q07890 1332 aaPredicted RBP5.72□□□□□ -1.49
RIF1-203ENST00000428287 PDS5AQ29RF7 1337 aaKnown RBP5.72□□□□□ -1.49
RIF1-203ENST00000428287 SSU72P8A0A1W2PR75 194 aa5.72□□□□□ -1.49
RIF1-203ENST00000428287 NUTM2BA6NNL0 878 aaPredicted RBP5.72□□□□□ -1.49
RIF1-203ENST00000428287 NUTM2EB1AL46 878 aaPredicted RBP5.72□□□□□ -1.49
RIF1-203ENST00000428287 F8W031 263 aaPredicted RBP5.72□□□□□ -1.49
RIF1-203ENST00000428287 PRC1O43663 620 aa5.72□□□□□ -1.49
RIF1-203ENST00000428287 SKIV2L2P42285 1042 aaKnown RBP5.72□□□□□ -1.49
RIF1-203ENST00000428287 SSR1P43307 286 aaKnown RBP5.72□□□□□ -1.49
RIF1-203ENST00000428287 COPB1P53618 953 aaKnown RBP5.72□□□□□ -1.49
RIF1-203ENST00000428287 BYSLQ13895 437 aaKnown RBP5.72□□□□□ -1.49
RIF1-203ENST00000428287 PIK3R5Q8WYR1 880 aa5.72□□□□□ -1.49
RIF1-203ENST00000428287 NUP58Q9BVL2 599 aa5.72□□□□□ -1.49
RIF1-203ENST00000428287 SLC12A4Q9UP95 1085 aa5.72□□□□□ -1.49
RIF1-203ENST00000428287 H0YHG0 523 aa5.72□□□□□ -1.49
RIF1-203ENST00000428287 N4BP3O15049 544 aa5.72□□□□□ -1.49
RIF1-203ENST00000428287 SRGNP10124 158 aa5.72□□□□□ -1.49
RIF1-203ENST00000428287 HDGFP51858 240 aaKnown RBP5.72□□□□□ -1.49
RIF1-203ENST00000428287 DRG2P55039 364 aaKnown RBP5.72□□□□□ -1.49
RIF1-203ENST00000428287 HERVK_113P62684 666 aa5.72□□□□□ -1.49
RIF1-203ENST00000428287 NEXNQ0ZGT2 675 aa5.72□□□□□ -1.49
RIF1-203ENST00000428287 COBLL1Q53SF7 1204 aa5.72□□□□□ -1.49
RIF1-203ENST00000428287 PIGWQ7Z7B1 504 aa5.72□□□□□ -1.49
RIF1-203ENST00000428287 TRMT44Q8IYL2 757 aaKnown RBP5.72□□□□□ -1.49
RIF1-203ENST00000428287 GBP7Q8N8V2 638 aaPredicted RBP5.72□□□□□ -1.49
RIF1-203ENST00000428287 PBKQ96KB5 322 aa5.72□□□□□ -1.49
RIF1-203ENST00000428287 PYM1Q9BRP8 204 aaKnown RBP5.72□□□□□ -1.49
RIF1-203ENST00000428287 PLEKHA4Q9H4M7 779 aa5.72□□□□□ -1.49
RIF1-203ENST00000428287 PECAM1P16284 738 aaPredicted RBP5.72□□□□□ -1.49
RIF1-203ENST00000428287 SCTRP47872 440 aa5.72□□□□□ -1.49
RIF1-203ENST00000428287 BLMHQ13867 455 aa5.72□□□□□ -1.49
RIF1-203ENST00000428287 NPY5RQ15761 445 aa5.72□□□□□ -1.49
RIF1-203ENST00000428287 IMMTQ16891 758 aaKnown RBP5.72□□□□□ -1.49
RIF1-203ENST00000428287 ZNF827Q17R98 1081 aa5.72□□□□□ -1.49
RIF1-203ENST00000428287 CCDC122Q5T0U0 273 aa5.72□□□□□ -1.49
RIF1-203ENST00000428287 ERMARDQ5T6L9 678 aa5.72□□□□□ -1.49
RIF1-203ENST00000428287 NBPF10Q6P3W6 841 aaKnown RBP5.72□□□□□ -1.49
RIF1-203ENST00000428287 PDILTQ8N807 584 aa5.72□□□□□ -1.49
RIF1-203ENST00000428287 RNPC3Q96LT9 517 aaKnown RBP5.72□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms