RNA–Protein interactions for RNA: ENST00000425660.5

ACTB-204, Transcript of actin beta, humanhuman

TSL 1 (best)

Gene ACTB, Length 1,845 nt, Biotype nonsense mediated decay, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-204ENST00000425660 COA7Q96BR5 231 aa17.35■□□□□ 0.37
ACTB-204ENST00000425660 SCAF8Q9UPN6 1271 aaKnown RBP17.35■□□□□ 0.37
ACTB-204ENST00000425660 RAD21O60216 631 aa17.35■□□□□ 0.37
ACTB-204ENST00000425660 ARL6IP4Q66PJ3 421 aaKnown RBP17.35■□□□□ 0.37
ACTB-204ENST00000425660 RIC8AQ9NPQ8 531 aa17.35■□□□□ 0.37
ACTB-204ENST00000425660 KCNH3Q9ULD8 1083 aa17.35■□□□□ 0.37
ACTB-204ENST00000425660 MRVI1Q9Y6F6 885 aa17.35■□□□□ 0.37
ACTB-204ENST00000425660 CTNND1O60716 968 aaKnown RBP17.34■□□□□ 0.37
ACTB-204ENST00000425660 ADCY7P51828 1080 aa17.34■□□□□ 0.37
ACTB-204ENST00000425660 TYRO3Q06418 890 aa17.34■□□□□ 0.37
ACTB-204ENST00000425660 NONOQ15233 471 aaKnown RBP eCLIP17.34■□□□□ 0.373e-11■■■■■ 39.9
ACTB-204ENST00000425660 CDC37Q16543 378 aaPredicted RBP17.34■□□□□ 0.37
ACTB-204ENST00000425660 QRICH1Q2TAL8 776 aa17.34■□□□□ 0.37
ACTB-204ENST00000425660 KIAA1755Q5JYT7 1200 aa17.34■□□□□ 0.37
ACTB-204ENST00000425660 ELOA2Q8IYF1 753 aaPredicted RBP17.34■□□□□ 0.37
ACTB-204ENST00000425660 C4orf32Q8N8J7 132 aa17.34■□□□□ 0.37
ACTB-204ENST00000425660 NUP88Q99567 741 aaPredicted RBP17.34■□□□□ 0.37
ACTB-204ENST00000425660 VCPKMTQ9H867 229 aa17.34■□□□□ 0.37
ACTB-204ENST00000425660 TMEM232C9JQI7 657 aa17.33■□□□□ 0.37
ACTB-204ENST00000425660 PLA2G6O60733 806 aa17.33■□□□□ 0.37
ACTB-204ENST00000425660 CLK2P49760 499 aaKnown RBP17.33■□□□□ 0.37
ACTB-204ENST00000425660 INF2Q27J81 1249 aa17.33■□□□□ 0.37
ACTB-204ENST00000425660 SYDE2Q5VT97 1194 aa17.33■□□□□ 0.37
ACTB-204ENST00000425660 ANGEL2Q5VTE6 544 aaKnown RBP17.33■□□□□ 0.37
ACTB-204ENST00000425660 HOOK2Q96ED9 719 aa17.33■□□□□ 0.37
ACTB-204ENST00000425660 SDF4Q9BRK5 362 aa17.33■□□□□ 0.37
ACTB-204ENST00000425660 CSRNP2Q9H175 543 aa17.33■□□□□ 0.37
ACTB-204ENST00000425660 GLT8D2Q9H1C3 349 aa17.33■□□□□ 0.37
ACTB-204ENST00000425660 FAM13BQ9NYF5 915 aa17.33■□□□□ 0.37
ACTB-204ENST00000425660 PPP2R3BQ9Y5P8 575 aa17.33■□□□□ 0.37
ACTB-204ENST00000425660 MCM7P33993 719 aa17.33■□□□□ 0.36
ACTB-204ENST00000425660 EPS15P42566 896 aa17.33■□□□□ 0.36
ACTB-204ENST00000425660 HIRAP54198 1017 aaPredicted RBP17.33■□□□□ 0.36
ACTB-204ENST00000425660 ORC2Q13416 577 aaPredicted RBP17.33■□□□□ 0.36
ACTB-204ENST00000425660 LAD1O00515 517 aa17.32■□□□□ 0.36
ACTB-204ENST00000425660 STAT2P52630 851 aa17.32■□□□□ 0.36
ACTB-204ENST00000425660 NBPF12Q5TAG4 269 aaPredicted RBP17.32■□□□□ 0.36
ACTB-204ENST00000425660 DCAF15Q66K64 600 aa17.32■□□□□ 0.36
ACTB-204ENST00000425660 SASS6Q6UVJ0 657 aa17.32■□□□□ 0.36
ACTB-204ENST00000425660 SPICE1Q8N0Z3 855 aa17.32■□□□□ 0.36
ACTB-204ENST00000425660 RNF214Q8ND24 703 aa17.32■□□□□ 0.36
ACTB-204ENST00000425660 CUL5Q93034 780 aa17.32■□□□□ 0.36
ACTB-204ENST00000425660 RNF181Q9P0P0 153 aa17.32■□□□□ 0.36
ACTB-204ENST00000425660 FRMD4AQ9P2Q2 1039 aaPredicted RBP17.32■□□□□ 0.36
ACTB-204ENST00000425660 ZNF112Q9UJU3 913 aa17.32■□□□□ 0.36
ACTB-204ENST00000425660 PITPNM2Q9BZ72 1349 aa17.32■□□□□ 0.36
ACTB-204ENST00000425660 CAVIN2O95810 425 aa17.31■□□□□ 0.36
ACTB-204ENST00000425660 MRPL12P52815 198 aaKnown RBP17.31■□□□□ 0.36
ACTB-204ENST00000425660 UVSSAQ2YD98 709 aa17.31■□□□□ 0.36
ACTB-204ENST00000425660 SPECC1Q5M775 1068 aa17.31■□□□□ 0.36
ACTB-204ENST00000425660 NEK8Q86SG6 692 aa17.31■□□□□ 0.36
ACTB-204ENST00000425660 AMNQ9BXJ7 453 aa17.31■□□□□ 0.36
ACTB-204ENST00000425660 GGA3Q9NZ52 723 aa17.31■□□□□ 0.36
ACTB-204ENST00000425660 KIAA1468Q9P260 1216 aa17.31■□□□□ 0.36
ACTB-204ENST00000425660 BIN2Q9UBW5 565 aaPredicted RBP17.31■□□□□ 0.36
ACTB-204ENST00000425660 PCDHA1Q9Y5I3 950 aa17.31■□□□□ 0.36
ACTB-204ENST00000425660 DDNO94850 711 aaPredicted RBP17.31■□□□□ 0.36
ACTB-204ENST00000425660 PRPHP41219 470 aa17.31■□□□□ 0.36
ACTB-204ENST00000425660 TEX2Q8IWB9 1127 aa17.31■□□□□ 0.36
ACTB-204ENST00000425660 TBCKQ8TEA7 893 aa17.31■□□□□ 0.36
ACTB-204ENST00000425660 GLIS2Q9BZE0 524 aaPredicted RBP17.31■□□□□ 0.36
ACTB-204ENST00000425660 PSTPIP2Q9H939 334 aa17.31■□□□□ 0.36
ACTB-204ENST00000425660 PRR12Q9ULL5 1215 aa17.31■□□□□ 0.36
ACTB-204ENST00000425660 IL17AQ16552 155 aa17.3■□□□□ 0.36
ACTB-204ENST00000425660 LONRF3Q496Y0 759 aa17.3■□□□□ 0.36
ACTB-204ENST00000425660 KRBA2Q6ZNG9 492 aa17.3■□□□□ 0.36
ACTB-204ENST00000425660 FAM200AQ8TCP9 573 aa17.3■□□□□ 0.36
ACTB-204ENST00000425660 ZNF341Q9BYN7 854 aa17.3■□□□□ 0.36
ACTB-204ENST00000425660 KIAA1683Q9H0B3 1180 aa17.3■□□□□ 0.36
ACTB-204ENST00000425660 ADARB2Q9NS39 739 aaKnown RBP17.3■□□□□ 0.36
ACTB-204ENST00000425660 FAM83BQ5T0W9 1011 aa17.29■□□□□ 0.36
ACTB-204ENST00000425660 JAKMIP3Q5VZ66 844 aa17.29■□□□□ 0.36
ACTB-204ENST00000425660 USP49Q70CQ1 688 aa17.29■□□□□ 0.36
ACTB-204ENST00000425660 CHURC1Q8WUH1 139 aa17.29■□□□□ 0.36
ACTB-204ENST00000425660 LPAR1Q92633 364 aa17.29■□□□□ 0.36
ACTB-204ENST00000425660 TMEM260Q9NX78 707 aa17.29■□□□□ 0.36
ACTB-204ENST00000425660 ATAD5Q96QE3 1844 aa17.29■□□□□ 0.36
ACTB-204ENST00000425660 VWA3AA6NCI4 1184 aa17.28■□□□□ 0.36
ACTB-204ENST00000425660 LONP1P36776 959 aaKnown RBP17.28■□□□□ 0.36
ACTB-204ENST00000425660 IKQ13123 557 aaPredicted RBP17.28■□□□□ 0.36
ACTB-204ENST00000425660 C9orf131Q5VYM1 1079 aa17.28■□□□□ 0.36
ACTB-204ENST00000425660 FAM160B2Q86V87 743 aa17.28■□□□□ 0.36
ACTB-204ENST00000425660 FBXO11Q86XK2 927 aa17.28■□□□□ 0.36
ACTB-204ENST00000425660 SYMPKQ92797 1274 aaKnown RBP17.28■□□□□ 0.36
ACTB-204ENST00000425660 EPSTI1Q96J88 318 aa17.28■□□□□ 0.36
ACTB-204ENST00000425660 POLR2DO15514 142 aaKnown RBP17.28■□□□□ 0.36
ACTB-204ENST00000425660 EDIL3O43854 480 aa17.28■□□□□ 0.36
ACTB-204ENST00000425660 TRAF1Q13077 416 aa17.28■□□□□ 0.36
ACTB-204ENST00000425660 STX1AQ16623 288 aa17.28■□□□□ 0.36
ACTB-204ENST00000425660 LETM2Q2VYF4 491 aa17.28■□□□□ 0.36
ACTB-204ENST00000425660 ANO6Q4KMQ2 910 aa17.28■□□□□ 0.36
ACTB-204ENST00000425660 CNNM3Q8NE01 707 aa17.28■□□□□ 0.36
ACTB-204ENST00000425660 ANP32BQ92688 251 aaKnown RBP17.28■□□□□ 0.36
ACTB-204ENST00000425660 TMEM60Q9H2L4 133 aa17.28■□□□□ 0.36
ACTB-204ENST00000425660 RANBP17Q9H2T7 1088 aaKnown RBP17.28■□□□□ 0.36
ACTB-204ENST00000425660 TUBE1Q9UJT0 475 aa17.28■□□□□ 0.36
ACTB-204ENST00000425660 FEM1BQ9UK73 627 aa17.28■□□□□ 0.36
ACTB-204ENST00000425660 CCNT1O60563 726 aaKnown RBP17.27■□□□□ 0.36
ACTB-204ENST00000425660 LMOD1P29536 600 aaPredicted RBP17.27■□□□□ 0.36
ACTB-204ENST00000425660 INPP5BP32019 993 aa17.27■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms