RNA–Protein interactions for RNA: ENST00000424880.2

SEC61A1-202, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

TSL 2 BASIC

Gene SEC61A1, Length 3,238 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-202ENST00000424880 PAPD7Q5XG87 772 aaKnown RBP12.58□□□□□ -0.39
SEC61A1-202ENST00000424880 NBPF10Q6P3W6 841 aaKnown RBP12.58□□□□□ -0.39
SEC61A1-202ENST00000424880 CCDC121Q6ZUS5 278 aa12.58□□□□□ -0.39
SEC61A1-202ENST00000424880 OR8K1Q8NGG5 319 aa12.58□□□□□ -0.39
SEC61A1-202ENST00000424880 NOC3LQ8WTT2 800 aaKnown RBP12.58□□□□□ -0.39
SEC61A1-202ENST00000424880 ZBTB10Q96DT7 871 aa12.58□□□□□ -0.39
SEC61A1-202ENST00000424880 NLRP3Q96P20 1036 aa12.58□□□□□ -0.39
SEC61A1-202ENST00000424880 CTAGE1Q96RT6 745 aa12.58□□□□□ -0.39
SEC61A1-202ENST00000424880 GGT7Q9UJ14 662 aa12.58□□□□□ -0.39
SEC61A1-202ENST00000424880 RIPOR2Q9Y4F9 1068 aa12.58□□□□□ -0.39
SEC61A1-202ENST00000424880 RTN2O75298 545 aa12.58□□□□□ -0.4
SEC61A1-202ENST00000424880 AP1G2O75843 785 aa12.58□□□□□ -0.4
SEC61A1-202ENST00000424880 SMTNP53814 917 aa12.58□□□□□ -0.4
SEC61A1-202ENST00000424880 MYO1EQ12965 1108 aa12.58□□□□□ -0.4
SEC61A1-202ENST00000424880 NTRK3Q16288 839 aa12.58□□□□□ -0.4
SEC61A1-202ENST00000424880 PTGISQ16647 500 aa12.58□□□□□ -0.4
SEC61A1-202ENST00000424880 TSR1Q2NL82 804 aaKnown RBP12.58□□□□□ -0.4
SEC61A1-202ENST00000424880 TMEM67Q5HYA8 995 aa12.58□□□□□ -0.4
SEC61A1-202ENST00000424880 C1orf141Q5JVX7 400 aa12.58□□□□□ -0.4
SEC61A1-202ENST00000424880 ATG9AQ7Z3C6 839 aa12.58□□□□□ -0.4
SEC61A1-202ENST00000424880 TMC4Q7Z404 712 aa12.58□□□□□ -0.4
SEC61A1-202ENST00000424880 EPB41L5Q9HCM4 733 aa12.58□□□□□ -0.4
SEC61A1-202ENST00000424880 DDX21Q9NR30 783 aaKnown RBP eCLIP12.58□□□□□ -0.4
SEC61A1-202ENST00000424880 NLRP2Q9NX02 1062 aa12.58□□□□□ -0.4
SEC61A1-202ENST00000424880 TNS3Q68CZ2 1445 aa12.58□□□□□ -0.4
SEC61A1-202ENST00000424880 FAM237AA0A1B0GTK4 181 aa12.58□□□□□ -0.4
SEC61A1-202ENST00000424880 TARSL2A2RTX5 802 aaKnown RBP12.58□□□□□ -0.4
SEC61A1-202ENST00000424880 B4DLN1 442 aa12.58□□□□□ -0.4
SEC61A1-202ENST00000424880 KRT86O43790 486 aa12.58□□□□□ -0.4
SEC61A1-202ENST00000424880 TRIM21P19474 475 aaKnown RBP12.58□□□□□ -0.4
SEC61A1-202ENST00000424880 TCP11X2Q5H9J9 407 aa12.58□□□□□ -0.4
SEC61A1-202ENST00000424880 CFAP58Q5T655 872 aa12.58□□□□□ -0.4
SEC61A1-202ENST00000424880 PARD3BQ8TEW8 1205 aa12.58□□□□□ -0.4
SEC61A1-202ENST00000424880 NELFBQ8WX92 580 aa12.58□□□□□ -0.4
SEC61A1-202ENST00000424880 STAMBPL1Q96FJ0 436 aa12.58□□□□□ -0.4
SEC61A1-202ENST00000424880 MYO1AQ9UBC5 1043 aa12.58□□□□□ -0.4
SEC61A1-202ENST00000424880 PACSIN2Q9UNF0 486 aaPredicted RBP12.58□□□□□ -0.4
SEC61A1-202ENST00000424880 LMO7Q8WWI1 1683 aa12.57□□□□□ -0.4
SEC61A1-202ENST00000424880 CAMTA1Q9Y6Y1 1673 aa12.57□□□□□ -0.4
SEC61A1-202ENST00000424880 PHF20L1A8MW92 1017 aa12.57□□□□□ -0.4
SEC61A1-202ENST00000424880 HGSO14964 777 aaPredicted RBP12.57□□□□□ -0.4
SEC61A1-202ENST00000424880 SSRP1Q08945 709 aaKnown RBP12.57□□□□□ -0.4
SEC61A1-202ENST00000424880 PNMA8AQ86V59 439 aaPredicted RBP12.57□□□□□ -0.4
SEC61A1-202ENST00000424880 TCP11Q8WWU5 503 aa12.57□□□□□ -0.4
SEC61A1-202ENST00000424880 NHEJ1Q9H9Q4 299 aaPredicted RBP12.57□□□□□ -0.4
SEC61A1-202ENST00000424880 COL18A1P39060 1754 aa12.57□□□□□ -0.4
SEC61A1-202ENST00000424880 EZRP15311 586 aaKnown RBP12.57□□□□□ -0.4
SEC61A1-202ENST00000424880 CKAP4Q07065 602 aaKnown RBP12.57□□□□□ -0.4
SEC61A1-202ENST00000424880 GRIK3Q13003 919 aa12.57□□□□□ -0.4
SEC61A1-202ENST00000424880 SAFBQ15424 915 aaKnown RBP eCLIP12.57□□□□□ -0.4
SEC61A1-202ENST00000424880 CCDC70Q6NSX1 233 aa12.57□□□□□ -0.4
SEC61A1-202ENST00000424880 SPATS2Q86XZ4 545 aaKnown RBP12.57□□□□□ -0.4
SEC61A1-202ENST00000424880 CYFIP2Q96F07 1278 aa12.57□□□□□ -0.4
SEC61A1-202ENST00000424880 SLAIN2Q9P270 581 aa12.57□□□□□ -0.4
SEC61A1-202ENST00000424880 ZNF330Q9Y3S2 320 aaPredicted RBP12.57□□□□□ -0.4
SEC61A1-202ENST00000424880 ZNF263O14978 683 aa12.56□□□□□ -0.4
SEC61A1-202ENST00000424880 ODF2Q5BJF6 829 aa12.56□□□□□ -0.4
SEC61A1-202ENST00000424880 TYW1BQ6NUM6 668 aa12.56□□□□□ -0.4
SEC61A1-202ENST00000424880 IFIT3O14879 490 aaKnown RBP12.56□□□□□ -0.4
SEC61A1-202ENST00000424880 CLTAP09496 248 aa12.56□□□□□ -0.4
SEC61A1-202ENST00000424880 HAUS3Q68CZ6 603 aa12.56□□□□□ -0.4
SEC61A1-202ENST00000424880 HIBCHQ6NVY1 386 aaPredicted RBP12.56□□□□□ -0.4
SEC61A1-202ENST00000424880 C8orf74Q6P047 294 aa12.56□□□□□ -0.4
SEC61A1-202ENST00000424880 YTHDF3Q7Z739 585 aaKnown RBP12.56□□□□□ -0.4
SEC61A1-202ENST00000424880 PAGR1Q9BTK6 254 aa12.56□□□□□ -0.4
SEC61A1-202ENST00000424880 STIM2Q9P246 746 aa12.56□□□□□ -0.4
SEC61A1-202ENST00000424880 SLC12A7Q9Y666 1083 aa12.56□□□□□ -0.4
SEC61A1-202ENST00000424880 DCDC2CA8MYV0 355 aa12.56□□□□□ -0.4
SEC61A1-202ENST00000424880 IDH1O75874 414 aaKnown RBP12.56□□□□□ -0.4
SEC61A1-202ENST00000424880 MMP1P03956 469 aa12.56□□□□□ -0.4
SEC61A1-202ENST00000424880 KCNB1Q14721 858 aa12.56□□□□□ -0.4
SEC61A1-202ENST00000424880 ZKSCAN8Q15776 578 aaPredicted RBP12.56□□□□□ -0.4
SEC61A1-202ENST00000424880 ENOX2Q16206 610 aaKnown RBP12.56□□□□□ -0.4
SEC61A1-202ENST00000424880 METTL22Q9BUU2 404 aaPredicted RBP12.56□□□□□ -0.4
SEC61A1-202ENST00000424880 STRN4Q9NRL3 753 aa12.56□□□□□ -0.4
SEC61A1-202ENST00000424880 UTYO14607 1347 aa12.55□□□□□ -0.4
SEC61A1-202ENST00000424880 IPO7O95373 1038 aaKnown RBP12.55□□□□□ -0.4
SEC61A1-202ENST00000424880 MDH1P40925 334 aaKnown RBP12.55□□□□□ -0.4
SEC61A1-202ENST00000424880 PRCPP42785 496 aa12.55□□□□□ -0.4
SEC61A1-202ENST00000424880 PPP1R7Q15435 360 aa12.55□□□□□ -0.4
SEC61A1-202ENST00000424880 NSMCE1Q8WV22 266 aa12.55□□□□□ -0.4
SEC61A1-202ENST00000424880 MTRQ99707 1265 aa12.55□□□□□ -0.4
SEC61A1-202ENST00000424880 UBAC1Q9BSL1 405 aa12.55□□□□□ -0.4
SEC61A1-202ENST00000424880 LRRC4CQ9HCJ2 640 aa12.55□□□□□ -0.4
SEC61A1-202ENST00000424880 SALL4Q9UJQ4 1053 aa12.55□□□□□ -0.4
SEC61A1-202ENST00000424880 SMIM22K7EJ46 135 aa12.55□□□□□ -0.4
SEC61A1-202ENST00000424880 SH2B2O14492 632 aaPredicted RBP12.55□□□□□ -0.4
SEC61A1-202ENST00000424880 HOXB7P09629 217 aa12.55□□□□□ -0.4
SEC61A1-202ENST00000424880 KIF5AQ12840 1032 aa12.55□□□□□ -0.4
SEC61A1-202ENST00000424880 DDX42Q86XP3 938 aaKnown RBP eCLIP12.55□□□□□ -0.4
SEC61A1-202ENST00000424880 SPATA20Q8TB22 786 aa12.55□□□□□ -0.4
SEC61A1-202ENST00000424880 CCDC51Q96ER9 411 aa12.55□□□□□ -0.4
SEC61A1-202ENST00000424880 MEGF6O75095 1541 aa12.55□□□□□ -0.4
SEC61A1-202ENST00000424880 PARP1P09874 1014 aaKnown RBP12.54□□□□□ -0.4
SEC61A1-202ENST00000424880 EPHB4P54760 987 aa12.54□□□□□ -0.4
SEC61A1-202ENST00000424880 SKOR1P84550 965 aa12.54□□□□□ -0.4
SEC61A1-202ENST00000424880 PLCB4Q15147 1175 aa12.54□□□□□ -0.4
SEC61A1-202ENST00000424880 THEMIS2Q5TEJ8 643 aa12.54□□□□□ -0.4
SEC61A1-202ENST00000424880 MICALCLQ6ZW33 695 aa12.54□□□□□ -0.4
SEC61A1-202ENST00000424880 ZNF483Q8TF39 744 aaPredicted RBP12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 101.8 ms