RNA–Protein interactions for RNA: ENST00000423214.1

COL18A1-205, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 5

Gene COL18A1, Length 839 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-205ENST00000423214 STX8Q9UNK0 236 aa19.16■□□□□ 0.66
COL18A1-205ENST00000423214 POTEB2H3BUK9 544 aa19.15■□□□□ 0.66
COL18A1-205ENST00000423214 SNAI1O95863 264 aaPredicted RBP19.15■□□□□ 0.66
COL18A1-205ENST00000423214 C6orf222P0C671 652 aaPredicted RBP19.15■□□□□ 0.66
COL18A1-205ENST00000423214 RRP1P56182 461 aaKnown RBP19.15■□□□□ 0.66
COL18A1-205ENST00000423214 ACVR2BQ13705 512 aa19.15■□□□□ 0.66
COL18A1-205ENST00000423214 CCDC129Q6ZRS4 1044 aa19.15■□□□□ 0.66
COL18A1-205ENST00000423214 CHURC1Q8WUH1 139 aa19.15■□□□□ 0.66
COL18A1-205ENST00000423214 GMCL1Q96IK5 515 aa19.15■□□□□ 0.66
COL18A1-205ENST00000423214 ABHD16BQ9H3Z7 469 aa19.15■□□□□ 0.66
COL18A1-205ENST00000423214 DCDC2CA8MYV0 355 aa19.14■□□□□ 0.65
COL18A1-205ENST00000423214 DUSP11O75319 330 aaKnown RBP19.14■□□□□ 0.65
COL18A1-205ENST00000423214 KCNA10Q16322 511 aa19.14■□□□□ 0.65
COL18A1-205ENST00000423214 ARMCX2Q7L311 632 aa19.14■□□□□ 0.65
COL18A1-205ENST00000423214 CHMP4CQ96CF2 233 aa19.14■□□□□ 0.65
COL18A1-205ENST00000423214 GLT1D1Q96MS3 346 aa19.14■□□□□ 0.65
COL18A1-205ENST00000423214 RNF146Q9NTX7 359 aa19.14■□□□□ 0.65
COL18A1-205ENST00000423214 TMEM39AQ9NV64 488 aa19.14■□□□□ 0.65
COL18A1-205ENST00000423214 MROH7Q68CQ1 1323 aa19.14■□□□□ 0.65
COL18A1-205ENST00000423214 UNC80Q8N2C7 3258 aa19.14■□□□□ 0.65
COL18A1-205ENST00000423214 CST5P28325 142 aaPredicted RBP19.13■□□□□ 0.65
COL18A1-205ENST00000423214 FPGSQ05932 587 aa19.13■□□□□ 0.65
COL18A1-205ENST00000423214 CTDSPL2Q05D32 466 aa19.13■□□□□ 0.65
COL18A1-205ENST00000423214 CCDC144BQ3MJ40 725 aa19.13■□□□□ 0.65
COL18A1-205ENST00000423214 ANKRD45Q5TZF3 282 aa19.13■□□□□ 0.65
COL18A1-205ENST00000423214 PCSK9Q8NBP7 692 aaKnown RBP19.13■□□□□ 0.65
COL18A1-205ENST00000423214 KLHDC9Q8NEP7 349 aa19.13■□□□□ 0.65
COL18A1-205ENST00000423214 RNPC3Q96LT9 517 aaKnown RBP19.13■□□□□ 0.65
COL18A1-205ENST00000423214 GUCD1Q96NT3 240 aa19.13■□□□□ 0.65
COL18A1-205ENST00000423214 DDX52Q9Y2R4 599 aaKnown RBP eCLIP19.13■□□□□ 0.652e-6■■■□□ 15.2
COL18A1-205ENST00000423214 SALL3Q9BXA9 1300 aa19.13■□□□□ 0.65
COL18A1-205ENST00000423214 GBF1Q92538 1859 aa19.13■□□□□ 0.65
COL18A1-205ENST00000423214 MYADML2A6NDP7 307 aa19.12■□□□□ 0.65
COL18A1-205ENST00000423214 KIAA0355O15063 1070 aa19.12■□□□□ 0.65
COL18A1-205ENST00000423214 MCCP23508 829 aa19.12■□□□□ 0.65
COL18A1-205ENST00000423214 SMAD3P84022 425 aaKnown RBP19.12■□□□□ 0.65
COL18A1-205ENST00000423214 TKFCQ3LXA3 575 aa19.12■□□□□ 0.65
COL18A1-205ENST00000423214 KCTD1Q719H9 257 aa19.12■□□□□ 0.65
COL18A1-205ENST00000423214 CCDC144CPQ8IYA2 1237 aa19.12■□□□□ 0.65
COL18A1-205ENST00000423214 STAG1Q8WVM7 1258 aa19.12■□□□□ 0.65
COL18A1-205ENST00000423214 EVI5LQ96CN4 794 aa19.12■□□□□ 0.65
COL18A1-205ENST00000423214 FGD4Q96M96 766 aa19.12■□□□□ 0.65
COL18A1-205ENST00000423214 TOMM22Q9NS69 142 aa19.12■□□□□ 0.65
COL18A1-205ENST00000423214 MTMR7Q9Y216 660 aa19.12■□□□□ 0.65
COL18A1-205ENST00000423214 RANBP6O60518 1105 aaKnown RBP19.11■□□□□ 0.65
COL18A1-205ENST00000423214 ALAS1P13196 640 aa19.11■□□□□ 0.65
COL18A1-205ENST00000423214 CNTN2Q02246 1040 aa19.11■□□□□ 0.65
COL18A1-205ENST00000423214 CCDC96Q2M329 555 aa19.11■□□□□ 0.65
COL18A1-205ENST00000423214 CCDC174Q6PII3 467 aa19.11■□□□□ 0.65
COL18A1-205ENST00000423214 ANKRD33Q7Z3H0 272 aa19.11■□□□□ 0.65
COL18A1-205ENST00000423214 VTI1AQ96AJ9 217 aa19.11■□□□□ 0.65
COL18A1-205ENST00000423214 AGBL1Q96MI9 1066 aa19.11■□□□□ 0.65
COL18A1-205ENST00000423214 TOX2Q96NM4 488 aa19.11■□□□□ 0.65
COL18A1-205ENST00000423214 UPF3AQ9H1J1 476 aaKnown RBP19.11■□□□□ 0.65
COL18A1-205ENST00000423214 A1CFQ9NQ94 594 aaKnown RBP19.11■□□□□ 0.65
COL18A1-205ENST00000423214 CDH23Q9H251 3354 aa19.11■□□□□ 0.65
COL18A1-205ENST00000423214 A0A0C4DFX4 3053 aa19.1■□□□□ 0.65
COL18A1-205ENST00000423214 ELP1O95163 1332 aa19.1■□□□□ 0.65
COL18A1-205ENST00000423214 A0A0U1RQG5 324 aaPredicted RBP19.1■□□□□ 0.65
COL18A1-205ENST00000423214 ADCY6O43306 1168 aa19.1■□□□□ 0.65
COL18A1-205ENST00000423214 ASGR1P07306 291 aa19.1■□□□□ 0.65
COL18A1-205ENST00000423214 ITGB8P26012 769 aa19.1■□□□□ 0.65
COL18A1-205ENST00000423214 GJA9P57773 515 aa19.1■□□□□ 0.65
COL18A1-205ENST00000423214 FAAP100Q0VG06 881 aa19.1■□□□□ 0.65
COL18A1-205ENST00000423214 NOL8Q76FK4 1167 aaKnown RBP19.1■□□□□ 0.65
COL18A1-205ENST00000423214 TRERF1Q96PN7 1200 aa19.1■□□□□ 0.65
COL18A1-205ENST00000423214 CRBNQ96SW2 442 aa19.1■□□□□ 0.65
COL18A1-205ENST00000423214 ZNF536O15090 1300 aa19.09■□□□□ 0.65
COL18A1-205ENST00000423214 ASB14A6NK59 587 aa19.09■□□□□ 0.65
COL18A1-205ENST00000423214 FOXP2O15409 715 aa19.09■□□□□ 0.65
COL18A1-205ENST00000423214 NMT2O60551 498 aa19.09■□□□□ 0.65
COL18A1-205ENST00000423214 PLA2G6O60733 806 aa19.09■□□□□ 0.65
COL18A1-205ENST00000423214 GNASQ5JWF2 1037 aa19.09■□□□□ 0.65
COL18A1-205ENST00000423214 VPS53Q5VIR6 699 aa19.09■□□□□ 0.65
COL18A1-205ENST00000423214 CCSAPQ6IQ19 270 aaPredicted RBP19.09■□□□□ 0.65
COL18A1-205ENST00000423214 RCSD1Q6JBY9 416 aa19.09■□□□□ 0.65
COL18A1-205ENST00000423214 RASGRP2Q7LDG7 609 aa19.09■□□□□ 0.65
COL18A1-205ENST00000423214 FAM133AQ8N9E0 248 aa19.09■□□□□ 0.65
COL18A1-205ENST00000423214 HELLSQ9NRZ9 838 aa19.09■□□□□ 0.65
COL18A1-205ENST00000423214 ANAPC4Q9UJX5 808 aa19.09■□□□□ 0.65
COL18A1-205ENST00000423214 CCPG1Q9ULG6 757 aa19.09■□□□□ 0.65
COL18A1-205ENST00000423214 TLR3O15455 904 aaKnown RBP19.08■□□□□ 0.64
COL18A1-205ENST00000423214 IRX5P78411 483 aaPredicted RBP19.08■□□□□ 0.64
COL18A1-205ENST00000423214 TNFAIP2Q03169 654 aa19.08■□□□□ 0.64
COL18A1-205ENST00000423214 RRP12Q5JTH9 1297 aaKnown RBP19.08■□□□□ 0.64
COL18A1-205ENST00000423214 DCAF4Q8WV16 495 aa19.08■□□□□ 0.64
COL18A1-205ENST00000423214 IL17RBQ9NRM6 502 aa19.08■□□□□ 0.64
COL18A1-205ENST00000423214 PRR12Q9ULL5 1215 aa19.08■□□□□ 0.64
COL18A1-205ENST00000423214 EYSQ5T1H1 3165 aa19.08■□□□□ 0.64
COL18A1-205ENST00000423214 MYO9BQ13459 2157 aa19.08■□□□□ 0.64
COL18A1-205ENST00000423214 ORC4O43929 436 aa19.07■□□□□ 0.64
COL18A1-205ENST00000423214 PDE1AP54750 535 aa19.07■□□□□ 0.64
COL18A1-205ENST00000423214 SNAP25P60880 206 aa19.07■□□□□ 0.64
COL18A1-205ENST00000423214 TLK2Q86UE8 772 aa19.07■□□□□ 0.64
COL18A1-205ENST00000423214 PHF6Q8IWS0 365 aaKnown RBP eCLIP19.07■□□□□ 0.64
COL18A1-205ENST00000423214 KATNBL1Q9H079 304 aa19.07■□□□□ 0.64
COL18A1-205ENST00000423214 INCENPQ9NQS7 918 aa19.07■□□□□ 0.64
COL18A1-205ENST00000423214 TMEM265A0A087WTH1 108 aa19.06■□□□□ 0.64
COL18A1-205ENST00000423214 C11orf97A0A1B0GVM6 126 aaPredicted RBP19.06■□□□□ 0.64
COL18A1-205ENST00000423214 SOWAHBA6NEL2 793 aa19.06■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms