RNA–Protein interactions for RNA: ENST00000422252.1

SMDT1-202, Transcript of single-pass membrane protein with aspartate rich tail 1, humanhuman

TSL 2

Gene SMDT1, Length 591 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMDT1-202ENST00000422252 TOP1P11387 765 aaKnown RBP30.09■■■□□ 2.41
SMDT1-202ENST00000422252 AKR1A1P14550 325 aa30.09■■■□□ 2.41
SMDT1-202ENST00000422252 MAGEA10P43363 369 aaPredicted RBP30.09■■■□□ 2.41
SMDT1-202ENST00000422252 CCDC96Q2M329 555 aa30.09■■■□□ 2.41
SMDT1-202ENST00000422252 TBC1D10CQ8IV04 446 aa30.09■■■□□ 2.41
SMDT1-202ENST00000422252 AGBL1Q96MI9 1066 aa30.09■■■□□ 2.41
SMDT1-202ENST00000422252 TMEM47Q9BQJ4 181 aa30.09■■■□□ 2.41
SMDT1-202ENST00000422252 RNF41Q9H4P4 317 aaPredicted RBP30.09■■■□□ 2.41
SMDT1-202ENST00000422252 XPNPEP3Q9NQH7 507 aa30.09■■■□□ 2.41
SMDT1-202ENST00000422252 PRR12Q9ULL5 1215 aa30.09■■■□□ 2.41
SMDT1-202ENST00000422252 SNAI1O95863 264 aaPredicted RBP30.08■■■□□ 2.41
SMDT1-202ENST00000422252 TKFCQ3LXA3 575 aa30.08■■■□□ 2.41
SMDT1-202ENST00000422252 SMCHD1A6NHR9 2005 aa30.07■■■□□ 2.4
SMDT1-202ENST00000422252 ZNF213O14771 459 aa30.07■■■□□ 2.4
SMDT1-202ENST00000422252 CCDC174Q6PII3 467 aa30.07■■■□□ 2.4
SMDT1-202ENST00000422252 RNF146Q9NTX7 359 aa30.07■■■□□ 2.4
SMDT1-202ENST00000422252 DNAH12Q6ZR08 3092 aa30.07■■■□□ 2.4
SMDT1-202ENST00000422252 RTP1P59025 263 aa30.06■■■□□ 2.4
SMDT1-202ENST00000422252 SNAP25P60880 206 aa30.06■■■□□ 2.4
SMDT1-202ENST00000422252 IRX6P78412 446 aaPredicted RBP30.06■■■□□ 2.4
SMDT1-202ENST00000422252 SLC39A5Q6ZMH5 540 aa30.06■■■□□ 2.4
SMDT1-202ENST00000422252 FGD4Q96M96 766 aa30.06■■■□□ 2.4
SMDT1-202ENST00000422252 TTC14Q96N46 770 aa30.06■■■□□ 2.4
SMDT1-202ENST00000422252 NEDD4P46934 1319 aa30.05■■■□□ 2.4
SMDT1-202ENST00000422252 ALAS1P13196 640 aa30.05■■■□□ 2.4
SMDT1-202ENST00000422252 PDE4AP27815 886 aa30.05■■■□□ 2.4
SMDT1-202ENST00000422252 ADCYAP1R1P41586 468 aa30.05■■■□□ 2.4
SMDT1-202ENST00000422252 RNF180Q86T96 592 aa30.05■■■□□ 2.4
SMDT1-202ENST00000422252 ESR2Q92731 530 aa30.05■■■□□ 2.4
SMDT1-202ENST00000422252 TRERF1Q96PN7 1200 aa30.05■■■□□ 2.4
SMDT1-202ENST00000422252 ZHX1Q9UKY1 873 aaPredicted RBP30.05■■■□□ 2.4
SMDT1-202ENST00000422252 FAM184BQ9ULE4 1060 aa30.05■■■□□ 2.4
SMDT1-202ENST00000422252 PGK1P00558 417 aa30.04■■■□□ 2.4
SMDT1-202ENST00000422252 BTNL9Q6UXG8 535 aa30.04■■■□□ 2.4
SMDT1-202ENST00000422252 DSCC1Q9BVC3 393 aa30.04■■■□□ 2.4
SMDT1-202ENST00000422252 A1CFQ9NQ94 594 aaKnown RBP30.04■■■□□ 2.4
SMDT1-202ENST00000422252 CDKN2AIPQ9NXV6 580 aaPredicted RBP30.04■■■□□ 2.4
SMDT1-202ENST00000422252 TTBK2Q6IQ55 1244 aa30.03■■■□□ 2.4
SMDT1-202ENST00000422252 FERMT2Q96AC1 680 aa30.03■■■□□ 2.4
SMDT1-202ENST00000422252 LENG1Q96BZ8 264 aaPredicted RBP30.03■■■□□ 2.4
SMDT1-202ENST00000422252 PHF24Q9UPV7 400 aa30.03■■■□□ 2.4
SMDT1-202ENST00000422252 ATP11BQ9Y2G3 1177 aa30.03■■■□□ 2.4
SMDT1-202ENST00000422252 POTEB2H3BUK9 544 aa30.02■■■□□ 2.4
SMDT1-202ENST00000422252 SLC16A2P36021 539 aa30.02■■■□□ 2.4
SMDT1-202ENST00000422252 NT5C2P49902 561 aa30.02■■■□□ 2.4
SMDT1-202ENST00000422252 CNTN2Q02246 1040 aa30.02■■■□□ 2.4
SMDT1-202ENST00000422252 ACVR2BQ13705 512 aa30.02■■■□□ 2.4
SMDT1-202ENST00000422252 SNX17Q15036 470 aa30.02■■■□□ 2.4
SMDT1-202ENST00000422252 TTC22Q5TAA0 569 aa30.02■■■□□ 2.4
SMDT1-202ENST00000422252 SYDE2Q5VT97 1194 aa30.02■■■□□ 2.4
SMDT1-202ENST00000422252 ARMCX2Q7L311 632 aa30.02■■■□□ 2.4
SMDT1-202ENST00000422252 FAM133AQ8N9E0 248 aa30.02■■■□□ 2.4
SMDT1-202ENST00000422252 UBE2OQ9C0C9 1292 aaKnown RBP30.02■■■□□ 2.4
SMDT1-202ENST00000422252 RANBP17Q9H2T7 1088 aaKnown RBP30.02■■■□□ 2.4
SMDT1-202ENST00000422252 ABHD16BQ9H3Z7 469 aa30.02■■■□□ 2.4
SMDT1-202ENST00000422252 CCPG1Q9ULG6 757 aa30.02■■■□□ 2.4
SMDT1-202ENST00000422252 LAMA4Q16363 1823 aa30.01■■■□□ 2.4
SMDT1-202ENST00000422252 FRMPD2Q68DX3 1309 aaPredicted RBP30.01■■■□□ 2.4
SMDT1-202ENST00000422252 ICAM1P05362 532 aa30.01■■■□□ 2.39
SMDT1-202ENST00000422252 PDHBP11177 359 aa30.01■■■□□ 2.39
SMDT1-202ENST00000422252 GPCPD1Q9NPB8 672 aa30.01■■■□□ 2.39
SMDT1-202ENST00000422252 ADAMTS4O75173 837 aa30■■■□□ 2.39
SMDT1-202ENST00000422252 GSPT1P15170 499 aaKnown RBP30■■■□□ 2.39
SMDT1-202ENST00000422252 MDM2Q00987 491 aaPredicted RBP30■■■□□ 2.39
SMDT1-202ENST00000422252 MUM1L1Q5H9M0 696 aa30■■■□□ 2.39
SMDT1-202ENST00000422252 C1orf53Q5VUE5 145 aa30■■■□□ 2.39
SMDT1-202ENST00000422252 CCDC144CPQ8IYA2 1237 aa30■■■□□ 2.39
SMDT1-202ENST00000422252 PRKAG2Q9UGJ0 569 aa30■■■□□ 2.39
SMDT1-202ENST00000422252 SYNRGQ9UMZ2 1314 aa29.99■■■□□ 2.39
SMDT1-202ENST00000422252 IMMTQ16891 758 aaKnown RBP29.99■■■□□ 2.39
SMDT1-202ENST00000422252 TDHQ8IZJ6 230 aa29.99■■■□□ 2.39
SMDT1-202ENST00000422252 ZKSCAN3Q9BRR0 538 aa29.99■■■□□ 2.39
SMDT1-202ENST00000422252 CTNNA3Q9UI47 895 aa29.99■■■□□ 2.39
SMDT1-202ENST00000422252 SOX1O00570 391 aaPredicted RBP29.98■■■□□ 2.39
SMDT1-202ENST00000422252 DUSP11O75319 330 aaKnown RBP29.98■■■□□ 2.39
SMDT1-202ENST00000422252 SNHG28P0DPA3 235 aa29.98■■■□□ 2.39
SMDT1-202ENST00000422252 ZNF543Q08ER8 600 aa29.98■■■□□ 2.39
SMDT1-202ENST00000422252 TRIM60Q495X7 471 aa29.98■■■□□ 2.39
SMDT1-202ENST00000422252 CCDC178Q5BJE1 867 aa29.98■■■□□ 2.39
SMDT1-202ENST00000422252 DGKHQ86XP1 1220 aa29.98■■■□□ 2.39
SMDT1-202ENST00000422252 LBHD1Q9BQE6 289 aaPredicted RBP29.98■■■□□ 2.39
SMDT1-202ENST00000422252 TSEN34Q9BSV6 310 aaKnown RBP29.98■■■□□ 2.39
SMDT1-202ENST00000422252 SOWAHBA6NEL2 793 aa29.97■■■□□ 2.39
SMDT1-202ENST00000422252 ASB14A6NK59 587 aa29.97■■■□□ 2.39
SMDT1-202ENST00000422252 KDM4AO75164 1064 aa29.97■■■□□ 2.39
SMDT1-202ENST00000422252 CCDC144BQ3MJ40 725 aa29.97■■■□□ 2.39
SMDT1-202ENST00000422252 IQCA1Q86XH1 822 aa29.97■■■□□ 2.39
SMDT1-202ENST00000422252 IL25Q9H293 177 aa29.97■■■□□ 2.39
SMDT1-202ENST00000422252 CYP39A1Q9NYL5 469 aa29.97■■■□□ 2.39
SMDT1-202ENST00000422252 SZT2Q5T011 3432 aa29.96■■■□□ 2.39
SMDT1-202ENST00000422252 MCM3APO60318 1980 aa29.96■■■□□ 2.39
SMDT1-202ENST00000422252 A0A1W2PQ45 241 aaPredicted RBP29.96■■■□□ 2.39
SMDT1-202ENST00000422252 A0A1W2PQY0 241 aa29.96■■■□□ 2.39
SMDT1-202ENST00000422252 NSMFQ6X4W1 530 aa29.96■■■□□ 2.39
SMDT1-202ENST00000422252 KLHDC9Q8NEP7 349 aa29.96■■■□□ 2.39
SMDT1-202ENST00000422252 KATNBL1Q9H079 304 aa29.96■■■□□ 2.39
SMDT1-202ENST00000422252 B4E1Z4 1266 aa29.95■■■□□ 2.39
SMDT1-202ENST00000422252 ADCY6O43306 1168 aa29.94■■■□□ 2.38
SMDT1-202ENST00000422252 LRCH3Q96II8 777 aa29.94■■■□□ 2.38
SMDT1-202ENST00000422252 PRDM5Q9NQX1 630 aaPredicted RBP29.94■■■□□ 2.38
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms