RNA–Protein interactions for RNA: ENST00000413354.5

MCF2L-211, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 5

Gene MCF2L, Length 952 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-211ENST00000413354 HOMER2Q9NSB8 354 aa18.43■□□□□ 0.54
MCF2L-211ENST00000413354 RNF146Q9NTX7 359 aa18.43■□□□□ 0.54
MCF2L-211ENST00000413354 SYNGAP1Q96PV0 1343 aa18.43■□□□□ 0.54
MCF2L-211ENST00000413354 MYH6P13533 1939 aa18.43■□□□□ 0.54
MCF2L-211ENST00000413354 DNAJC25-GNG10A0A024R161 153 aa18.42■□□□□ 0.54
MCF2L-211ENST00000413354 EVI5O60447 810 aa18.42■□□□□ 0.54
MCF2L-211ENST00000413354 SNHG28P0DPA3 235 aa18.42■□□□□ 0.54
MCF2L-211ENST00000413354 MNX1P50219 401 aaPredicted RBP18.42■□□□□ 0.54
MCF2L-211ENST00000413354 ZNF543Q08ER8 600 aa18.42■□□□□ 0.54
MCF2L-211ENST00000413354 GPATCH4Q5T3I0 446 aaKnown RBP18.42■□□□□ 0.54
MCF2L-211ENST00000413354 CCDC174Q6PII3 467 aa18.42■□□□□ 0.54
MCF2L-211ENST00000413354 ZSCAN10Q96SZ4 725 aaPredicted RBP18.42■□□□□ 0.54
MCF2L-211ENST00000413354 ZKSCAN3Q9BRR0 538 aa18.42■□□□□ 0.54
MCF2L-211ENST00000413354 UBAC1Q9BSL1 405 aa18.42■□□□□ 0.54
MCF2L-211ENST00000413354 RANBP17Q9H2T7 1088 aaKnown RBP18.42■□□□□ 0.54
MCF2L-211ENST00000413354 KAT14Q9H8E8 782 aa18.42■□□□□ 0.54
MCF2L-211ENST00000413354 CNPY2Q9Y2B0 182 aa18.42■□□□□ 0.54
MCF2L-211ENST00000413354 PFASO15067 1338 aa18.42■□□□□ 0.54
MCF2L-211ENST00000413354 ZNF536O15090 1300 aa18.42■□□□□ 0.54
MCF2L-211ENST00000413354 FRMPD2Q68DX3 1309 aaPredicted RBP18.42■□□□□ 0.54
MCF2L-211ENST00000413354 H0YGN5 161 aa18.41■□□□□ 0.54
MCF2L-211ENST00000413354 ICAM1P05362 532 aa18.41■□□□□ 0.54
MCF2L-211ENST00000413354 PNMA1Q8ND90 353 aa18.41■□□□□ 0.54
MCF2L-211ENST00000413354 ANKS1AQ92625 1134 aa18.41■□□□□ 0.54
MCF2L-211ENST00000413354 AGBL1Q96MI9 1066 aa18.41■□□□□ 0.54
MCF2L-211ENST00000413354 GPCPD1Q9NPB8 672 aa18.41■□□□□ 0.54
MCF2L-211ENST00000413354 ZSWIM5Q9P217 1185 aa18.41■□□□□ 0.54
MCF2L-211ENST00000413354 CCPG1Q9ULG6 757 aa18.41■□□□□ 0.54
MCF2L-211ENST00000413354 TNKSO95271 1327 aa18.41■□□□□ 0.54
MCF2L-211ENST00000413354 DNM1LO00429 736 aa18.4■□□□□ 0.54
MCF2L-211ENST00000413354 ALAS1P13196 640 aa18.4■□□□□ 0.54
MCF2L-211ENST00000413354 SLC16A2P36021 539 aa18.4■□□□□ 0.54
MCF2L-211ENST00000413354 PTH1RQ03431 593 aa18.4■□□□□ 0.54
MCF2L-211ENST00000413354 TTBK2Q6IQ55 1244 aa18.4■□□□□ 0.54
MCF2L-211ENST00000413354 MAMDC4Q6UXC1 1216 aa18.4■□□□□ 0.54
MCF2L-211ENST00000413354 KIAA1211Q6ZU35 1233 aa18.4■□□□□ 0.54
MCF2L-211ENST00000413354 ARRDC4Q8NCT1 418 aa18.4■□□□□ 0.54
MCF2L-211ENST00000413354 TRERF1Q96PN7 1200 aa18.4■□□□□ 0.54
MCF2L-211ENST00000413354 POTEB2H3BUK9 544 aa18.39■□□□□ 0.53
MCF2L-211ENST00000413354 RARBP10826 455 aa18.39■□□□□ 0.53
MCF2L-211ENST00000413354 COL6A1P12109 1028 aa18.39■□□□□ 0.53
MCF2L-211ENST00000413354 AKR1A1P14550 325 aa18.39■□□□□ 0.53
MCF2L-211ENST00000413354 BMP2KLQ5H9B9 411 aa18.39■□□□□ 0.53
MCF2L-211ENST00000413354 ENAHQ8N8S7 591 aaPredicted RBP18.39■□□□□ 0.53
MCF2L-211ENST00000413354 A1CFQ9NQ94 594 aaKnown RBP18.39■□□□□ 0.53
MCF2L-211ENST00000413354 KBTBD13C9JR72 458 aa18.38■□□□□ 0.53
MCF2L-211ENST00000413354 NEFLP07196 543 aa18.38■□□□□ 0.53
MCF2L-211ENST00000413354 CYP21A2P08686 494 aa18.38■□□□□ 0.53
MCF2L-211ENST00000413354 SNAP25P60880 206 aa18.38■□□□□ 0.53
MCF2L-211ENST00000413354 ASPRV1Q53RT3 343 aa18.38■□□□□ 0.53
MCF2L-211ENST00000413354 PRAMEF19Q5SWL8 479 aa18.38■□□□□ 0.53
MCF2L-211ENST00000413354 IFIT1BQ5T764 474 aaKnown RBP18.38■□□□□ 0.53
MCF2L-211ENST00000413354 RALYLQ86SE5 291 aaKnown RBP18.38■□□□□ 0.53
MCF2L-211ENST00000413354 WDR19Q8NEZ3 1342 aa18.38■□□□□ 0.53
MCF2L-211ENST00000413354 LCTP09848 1927 aa18.37■□□□□ 0.53
MCF2L-211ENST00000413354 FAM133AQ8N9E0 248 aa18.37■□□□□ 0.53
MCF2L-211ENST00000413354 MAP4K1Q92918 833 aa18.37■□□□□ 0.53
MCF2L-211ENST00000413354 CCDC136Q96JN2 1154 aa18.37■□□□□ 0.53
MCF2L-211ENST00000413354 ERICH2A1L162 156 aa18.36■□□□□ 0.53
MCF2L-211ENST00000413354 ASB14A6NK59 587 aa18.36■□□□□ 0.53
MCF2L-211ENST00000413354 LRRC37A2A6NM11 1700 aa18.36■□□□□ 0.53
MCF2L-211ENST00000413354 PARP1P09874 1014 aaKnown RBP18.36■□□□□ 0.53
MCF2L-211ENST00000413354 ZNF865P0CJ78 1059 aaPredicted RBP18.36■□□□□ 0.53
MCF2L-211ENST00000413354 SART3Q15020 963 aaKnown RBP18.36■□□□□ 0.53
MCF2L-211ENST00000413354 ANO1Q5XXA6 986 aa18.36■□□□□ 0.53
MCF2L-211ENST00000413354 ARMCX2Q7L311 632 aa18.36■□□□□ 0.53
MCF2L-211ENST00000413354 C7orf61Q8IZ16 206 aa18.36■□□□□ 0.53
MCF2L-211ENST00000413354 NCOA7Q8NI08 942 aa18.36■□□□□ 0.53
MCF2L-211ENST00000413354 ABHD16BQ9H3Z7 469 aa18.36■□□□□ 0.53
MCF2L-211ENST00000413354 XPNPEP3Q9NQH7 507 aa18.36■□□□□ 0.53
MCF2L-211ENST00000413354 CDKN2AIPQ9NXV6 580 aaPredicted RBP18.36■□□□□ 0.53
MCF2L-211ENST00000413354 ZHX1Q9UKY1 873 aaPredicted RBP18.36■□□□□ 0.53
MCF2L-211ENST00000413354 SNAI1O95863 264 aaPredicted RBP18.35■□□□□ 0.53
MCF2L-211ENST00000413354 MUM1L1Q5H9M0 696 aa18.35■□□□□ 0.53
MCF2L-211ENST00000413354 CASC1Q6TDU7 716 aa18.35■□□□□ 0.53
MCF2L-211ENST00000413354 NSMFQ6X4W1 530 aa18.35■□□□□ 0.53
MCF2L-211ENST00000413354 FGD4Q96M96 766 aa18.35■□□□□ 0.53
MCF2L-211ENST00000413354 ESYT1Q9BSJ8 1104 aa18.35■□□□□ 0.53
MCF2L-211ENST00000413354 CYP39A1Q9NYL5 469 aa18.35■□□□□ 0.53
MCF2L-211ENST00000413354 FAM184BQ9ULE4 1060 aa18.35■□□□□ 0.53
MCF2L-211ENST00000413354 RBM8AQ9Y5S9 174 aaKnown RBP18.35■□□□□ 0.53
MCF2L-211ENST00000413354 E7EWF7 191 aa18.34■□□□□ 0.53
MCF2L-211ENST00000413354 GOLGA8HP0CJ92 632 aa18.34■□□□□ 0.53
MCF2L-211ENST00000413354 TAL1P17542 331 aaPredicted RBP18.34■□□□□ 0.53
MCF2L-211ENST00000413354 CNTN2Q02246 1040 aa18.34■□□□□ 0.53
MCF2L-211ENST00000413354 ACVR2BQ13705 512 aa18.34■□□□□ 0.53
MCF2L-211ENST00000413354 LRRC41Q15345 812 aa18.34■□□□□ 0.53
MCF2L-211ENST00000413354 SEC23AQ15436 765 aa18.34■□□□□ 0.53
MCF2L-211ENST00000413354 GJC2Q5T442 439 aaPredicted RBP18.34■□□□□ 0.53
MCF2L-211ENST00000413354 CYB5R4Q7L1T6 521 aa18.34■□□□□ 0.53
MCF2L-211ENST00000413354 RNF180Q86T96 592 aa18.34■□□□□ 0.53
MCF2L-211ENST00000413354 SENP6Q9GZR1 1112 aaPredicted RBP18.34■□□□□ 0.53
MCF2L-211ENST00000413354 LOC102724159A0A0B4J2E5 919 aa18.33■□□□□ 0.52
MCF2L-211ENST00000413354 MYCNP04198 464 aaPredicted RBP18.33■□□□□ 0.52
MCF2L-211ENST00000413354 PWP2Q15269 919 aaKnown RBP18.33■□□□□ 0.52
MCF2L-211ENST00000413354 CCDC144CPQ8IYA2 1237 aa18.33■□□□□ 0.52
MCF2L-211ENST00000413354 ADD3Q9UEY8 706 aaKnown RBP18.33■□□□□ 0.52
MCF2L-211ENST00000413354 IFIT3O14879 490 aaKnown RBP18.32■□□□□ 0.52
MCF2L-211ENST00000413354 DUSP11O75319 330 aaKnown RBP18.32■□□□□ 0.52
MCF2L-211ENST00000413354 WTAPQ15007 396 aa18.32■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 66.9 ms