RNA–Protein interactions for RNA: ENST00000413296.1

CBX1P3-201, Transcript of chromobox 1 pseudogene 3, humanhuman

BASIC

Gene CBX1P3, Length 527 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX1P3-201ENST00000413296 SYNRGQ9UMZ2 1314 aa6.85□□□□□ -1.31
CBX1P3-201ENST00000413296 A6NNZ2 444 aa6.85□□□□□ -1.31
CBX1P3-201ENST00000413296 INMTO95050 263 aa6.85□□□□□ -1.31
CBX1P3-201ENST00000413296 ZBED1O96006 694 aa6.85□□□□□ -1.31
CBX1P3-201ENST00000413296 IGFALSP35858 605 aa6.85□□□□□ -1.31
CBX1P3-201ENST00000413296 KRT83P78385 493 aa6.85□□□□□ -1.31
CBX1P3-201ENST00000413296 FAPQ12884 760 aa6.85□□□□□ -1.31
CBX1P3-201ENST00000413296 KLF1Q13351 362 aaPredicted RBP6.85□□□□□ -1.31
CBX1P3-201ENST00000413296 ODF1Q14990 250 aa6.85□□□□□ -1.31
CBX1P3-201ENST00000413296 RGL3Q3MIN7 710 aa6.85□□□□□ -1.31
CBX1P3-201ENST00000413296 SV2CQ496J9 727 aa6.85□□□□□ -1.31
CBX1P3-201ENST00000413296 DNAJC21Q5F1R6 531 aaKnown RBP6.85□□□□□ -1.31
CBX1P3-201ENST00000413296 PEAR1Q5VY43 1037 aaPredicted RBP6.85□□□□□ -1.31
CBX1P3-201ENST00000413296 CYP26C1Q6V0L0 522 aa6.85□□□□□ -1.31
CBX1P3-201ENST00000413296 UBE2R2Q712K3 238 aaPredicted RBP6.85□□□□□ -1.31
CBX1P3-201ENST00000413296 C7orf61Q8IZ16 206 aa6.85□□□□□ -1.31
CBX1P3-201ENST00000413296 ZNF295-AS1Q8N0V1 137 aa6.85□□□□□ -1.31
CBX1P3-201ENST00000413296 KCT2Q8NC54 265 aa6.85□□□□□ -1.31
CBX1P3-201ENST00000413296 ZNF784Q8NCA9 323 aaPredicted RBP6.85□□□□□ -1.31
CBX1P3-201ENST00000413296 FLCNQ8NFG4 579 aa6.85□□□□□ -1.31
CBX1P3-201ENST00000413296 AFAP1L1Q8TED9 768 aa6.85□□□□□ -1.31
CBX1P3-201ENST00000413296 TBC1D31Q96DN5 1066 aa6.85□□□□□ -1.31
CBX1P3-201ENST00000413296 DDX11Q96FC9 970 aa6.85□□□□□ -1.31
CBX1P3-201ENST00000413296 FAXDC2Q96IV6 333 aa6.85□□□□□ -1.31
CBX1P3-201ENST00000413296 ZMAT2Q96NC0 199 aaKnown RBP6.85□□□□□ -1.31
CBX1P3-201ENST00000413296 XPO4Q9C0E2 1151 aaKnown RBP6.85□□□□□ -1.31
CBX1P3-201ENST00000413296 ANKEF1Q9NU02 776 aa6.85□□□□□ -1.31
CBX1P3-201ENST00000413296 MRGBPQ9NV56 204 aa6.85□□□□□ -1.31
CBX1P3-201ENST00000413296 ABI2Q9NYB9 513 aaPredicted RBP6.85□□□□□ -1.31
CBX1P3-201ENST00000413296 PCDHB10Q9UN67 800 aa6.85□□□□□ -1.31
CBX1P3-201ENST00000413296 PEG3Q9GZU2 1588 aa6.85□□□□□ -1.31
CBX1P3-201ENST00000413296 LTBP3Q9NS15 1303 aa6.84□□□□□ -1.31
CBX1P3-201ENST00000413296 ANKRD18BA2A2Z9 1011 aa6.84□□□□□ -1.31
CBX1P3-201ENST00000413296 SYNDIG1LA6NDD5 238 aa6.84□□□□□ -1.31
CBX1P3-201ENST00000413296 MEIS3P2A8K0S8 358 aa6.84□□□□□ -1.31
CBX1P3-201ENST00000413296 C19orf81C9J6K1 198 aa6.84□□□□□ -1.31
CBX1P3-201ENST00000413296 POTEB2H3BUK9 544 aa6.84□□□□□ -1.31
CBX1P3-201ENST00000413296 EYA2O00167 538 aa6.84□□□□□ -1.31
CBX1P3-201ENST00000413296 MAFKO60675 156 aa6.84□□□□□ -1.31
CBX1P3-201ENST00000413296 PAGE1O75459 146 aa6.84□□□□□ -1.31
CBX1P3-201ENST00000413296 TIPRLO75663 272 aa6.84□□□□□ -1.31
CBX1P3-201ENST00000413296 HOXB3P14651 431 aaPredicted RBP6.84□□□□□ -1.31
CBX1P3-201ENST00000413296 RAC2P15153 192 aa6.84□□□□□ -1.31
CBX1P3-201ENST00000413296 CTNNA1P35221 906 aaKnown RBP6.84□□□□□ -1.31
CBX1P3-201ENST00000413296 CAP2P40123 477 aa6.84□□□□□ -1.31
CBX1P3-201ENST00000413296 PLIN5Q00G26 463 aa6.84□□□□□ -1.31
CBX1P3-201ENST00000413296 TNFAIP2Q03169 654 aa6.84□□□□□ -1.31
CBX1P3-201ENST00000413296 IFIT5Q13325 482 aaKnown RBP6.84□□□□□ -1.31
CBX1P3-201ENST00000413296 CCDC158Q5M9N0 1113 aa6.84□□□□□ -1.31
CBX1P3-201ENST00000413296 SLC10A5Q5PT55 438 aa6.84□□□□□ -1.31
CBX1P3-201ENST00000413296 IER5Q5VY09 327 aa6.84□□□□□ -1.31
CBX1P3-201ENST00000413296 CDCA2Q69YH5 1023 aaPredicted RBP6.84□□□□□ -1.31
CBX1P3-201ENST00000413296 ITPRIPL1Q6GPH6 555 aa6.84□□□□□ -1.31
CBX1P3-201ENST00000413296 HIBCHQ6NVY1 386 aaPredicted RBP6.84□□□□□ -1.31
CBX1P3-201ENST00000413296 UNC5AQ6ZN44 842 aa6.84□□□□□ -1.31
CBX1P3-201ENST00000413296 FGD2Q7Z6J4 655 aa6.84□□□□□ -1.31
CBX1P3-201ENST00000413296 ARL6IP6Q8N6S5 226 aa6.84□□□□□ -1.31
CBX1P3-201ENST00000413296 C1orf162Q8NEQ5 155 aaPredicted RBP6.84□□□□□ -1.31
CBX1P3-201ENST00000413296 APPL2Q8NEU8 664 aa6.84□□□□□ -1.31
CBX1P3-201ENST00000413296 RHPN1Q8TCX5 695 aa6.84□□□□□ -1.31
CBX1P3-201ENST00000413296 BTN2A2Q8WVV5 523 aa6.84□□□□□ -1.31
CBX1P3-201ENST00000413296 CNKSR1Q969H4 720 aa6.84□□□□□ -1.31
CBX1P3-201ENST00000413296 LRCH3Q96II8 777 aa6.84□□□□□ -1.31
CBX1P3-201ENST00000413296 ZFRQ96KR1 1074 aaKnown RBP6.84□□□□□ -1.31
CBX1P3-201ENST00000413296 UBXN10Q96LJ8 280 aa6.84□□□□□ -1.31
CBX1P3-201ENST00000413296 TAAR9Q96RI9 348 aa6.84□□□□□ -1.31
CBX1P3-201ENST00000413296 TBCBQ99426 244 aa6.84□□□□□ -1.31
CBX1P3-201ENST00000413296 BARD1Q99728 777 aaKnown RBP6.84□□□□□ -1.31
CBX1P3-201ENST00000413296 SLC4A5Q9BY07 1137 aa6.84□□□□□ -1.31
CBX1P3-201ENST00000413296 RNF38Q9H0F5 515 aa6.84□□□□□ -1.31
CBX1P3-201ENST00000413296 FAM204AQ9H8W3 233 aa6.84□□□□□ -1.31
CBX1P3-201ENST00000413296 PLEKHA5Q9HAU0 1116 aa6.84□□□□□ -1.31
CBX1P3-201ENST00000413296 TOPORSQ9NS56 1045 aaPredicted RBP6.84□□□□□ -1.31
CBX1P3-201ENST00000413296 RRN3P2A6NIE6 340 aa6.83□□□□□ -1.32
CBX1P3-201ENST00000413296 TRIM64CA6NLI5 447 aa6.83□□□□□ -1.32
CBX1P3-201ENST00000413296 RASA4BC9J798 803 aa6.83□□□□□ -1.32
CBX1P3-201ENST00000413296 AREL1O15033 823 aa6.83□□□□□ -1.32
CBX1P3-201ENST00000413296 RASA4O43374 803 aa6.83□□□□□ -1.32
CBX1P3-201ENST00000413296 AP1G1O43747 822 aa6.83□□□□□ -1.32
CBX1P3-201ENST00000413296 GRIN3BO60391 1043 aa6.83□□□□□ -1.32
CBX1P3-201ENST00000413296 EFCAB14O75071 495 aa6.83□□□□□ -1.32
CBX1P3-201ENST00000413296 CFBP00751 764 aa6.83□□□□□ -1.32
CBX1P3-201ENST00000413296 IDEP14735 1019 aa6.83□□□□□ -1.32
CBX1P3-201ENST00000413296 GALNSP34059 522 aa6.83□□□□□ -1.32
CBX1P3-201ENST00000413296 DEKP35659 375 aaKnown RBP6.83□□□□□ -1.32
CBX1P3-201ENST00000413296 KRT85P78386 507 aa6.83□□□□□ -1.32
CBX1P3-201ENST00000413296 DHX9Q08211 1270 aaKnown RBP6.83□□□□□ -1.32
CBX1P3-201ENST00000413296 SART3Q15020 963 aaKnown RBP6.83□□□□□ -1.32
CBX1P3-201ENST00000413296 PLCB4Q15147 1175 aa6.83□□□□□ -1.32
CBX1P3-201ENST00000413296 ZYXQ15942 572 aaKnown RBP6.83□□□□□ -1.32
CBX1P3-201ENST00000413296 RRP12Q5JTH9 1297 aaKnown RBP6.83□□□□□ -1.32
CBX1P3-201ENST00000413296 CCDC129Q6ZRS4 1044 aa6.83□□□□□ -1.32
CBX1P3-201ENST00000413296 GPR155Q7Z3F1 870 aa6.83□□□□□ -1.32
CBX1P3-201ENST00000413296 BRSK2Q8IWQ3 736 aa6.83□□□□□ -1.32
CBX1P3-201ENST00000413296 TMEM40Q8WWA1 233 aa6.83□□□□□ -1.32
CBX1P3-201ENST00000413296 VMP1Q96GC9 406 aa6.83□□□□□ -1.32
CBX1P3-201ENST00000413296 AHCYL2Q96HN2 611 aaKnown RBP6.83□□□□□ -1.32
CBX1P3-201ENST00000413296 RSRC1Q96IZ7 334 aaKnown RBP6.83□□□□□ -1.32
CBX1P3-201ENST00000413296 FAM193BQ96PV7 902 aaPredicted RBP6.83□□□□□ -1.32
CBX1P3-201ENST00000413296 TCF12Q99081 682 aa6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms