RNA–Protein interactions for RNA: ENST00000412686.5

CPSF4-202, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 5

Gene CPSF4, Length 745 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-202ENST00000412686 SPOCK2Q92563 424 aa9.02□□□□□ -0.97
CPSF4-202ENST00000412686 TMEM87BQ96K49 555 aa9.02□□□□□ -0.97
CPSF4-202ENST00000412686 RANBP17Q9H2T7 1088 aaKnown RBP9.02□□□□□ -0.97
CPSF4-202ENST00000412686 CWC22Q9HCG8 908 aaKnown RBP9.02□□□□□ -0.97
CPSF4-202ENST00000412686 HOMER2Q9NSB8 354 aa9.02□□□□□ -0.97
CPSF4-202ENST00000412686 MAD2L2Q9UI95 211 aa9.02□□□□□ -0.97
CPSF4-202ENST00000412686 ZNF236Q9UL36 1845 aa9.02□□□□□ -0.97
CPSF4-202ENST00000412686 PALM3A6NDB9 673 aaPredicted RBP9.01□□□□□ -0.97
CPSF4-202ENST00000412686 PLA2G6O60733 806 aa9.01□□□□□ -0.97
CPSF4-202ENST00000412686 GNRH1P01148 92 aa9.01□□□□□ -0.97
CPSF4-202ENST00000412686 CASTP20810 708 aaKnown RBP9.01□□□□□ -0.97
CPSF4-202ENST00000412686 GRB14Q14449 540 aa9.01□□□□□ -0.97
CPSF4-202ENST00000412686 KRT32Q14532 448 aa9.01□□□□□ -0.97
CPSF4-202ENST00000412686 SLC9C1Q4G0N8 1177 aa9.01□□□□□ -0.97
CPSF4-202ENST00000412686 ASPRV1Q53RT3 343 aa9.01□□□□□ -0.97
CPSF4-202ENST00000412686 MUM1L1Q5H9M0 696 aa9.01□□□□□ -0.97
CPSF4-202ENST00000412686 GPATCH4Q5T3I0 446 aaKnown RBP9.01□□□□□ -0.97
CPSF4-202ENST00000412686 BLOC1S2Q6QNY1 142 aa9.01□□□□□ -0.97
CPSF4-202ENST00000412686 NFXL1Q6ZNB6 911 aa9.01□□□□□ -0.97
CPSF4-202ENST00000412686 CATIPQ7Z7H3 387 aa9.01□□□□□ -0.97
CPSF4-202ENST00000412686 CMTR1Q8N1G2 835 aaKnown RBP9.01□□□□□ -0.97
CPSF4-202ENST00000412686 SHCBP1Q8NEM2 672 aa9.01□□□□□ -0.97
CPSF4-202ENST00000412686 TRIB2Q92519 343 aa9.01□□□□□ -0.97
CPSF4-202ENST00000412686 USP6NLQ92738 828 aa9.01□□□□□ -0.97
CPSF4-202ENST00000412686 NUDT12Q9BQG2 462 aa9.01□□□□□ -0.97
CPSF4-202ENST00000412686 TEX13BQ9BXU2 312 aa9.01□□□□□ -0.97
CPSF4-202ENST00000412686 UPF3BQ9BZI7 483 aaKnown RBP9.01□□□□□ -0.97
CPSF4-202ENST00000412686 VAT1LQ9HCJ6 419 aa9.01□□□□□ -0.97
CPSF4-202ENST00000412686 FLRT1Q9NZU1 646 aa9.01□□□□□ -0.97
CPSF4-202ENST00000412686 BRPF3Q9ULD4 1205 aa9.01□□□□□ -0.97
CPSF4-202ENST00000412686 CTDP1Q9Y5B0 961 aaPredicted RBP9.01□□□□□ -0.97
CPSF4-202ENST00000412686 ZNFX1Q9P2E3 1918 aaKnown RBP9.01□□□□□ -0.97
CPSF4-202ENST00000412686 PLXNA1Q9UIW2 1896 aa9□□□□□ -0.97
CPSF4-202ENST00000412686 LCTP09848 1927 aa9□□□□□ -0.97
CPSF4-202ENST00000412686 MYH6P13533 1939 aa9□□□□□ -0.97
CPSF4-202ENST00000412686 CCDC69A6NI79 296 aa9□□□□□ -0.97
CPSF4-202ENST00000412686 CCDC85CA6NKD9 419 aa9□□□□□ -0.97
CPSF4-202ENST00000412686 ATP2A1O14983 1001 aa9□□□□□ -0.97
CPSF4-202ENST00000412686 EPB41L2O43491 1005 aaKnown RBP9□□□□□ -0.97
CPSF4-202ENST00000412686 CYTH3O43739 400 aa9□□□□□ -0.97
CPSF4-202ENST00000412686 DHX16O60231 1041 aaKnown RBP9□□□□□ -0.97
CPSF4-202ENST00000412686 ADCY3O60266 1144 aa9□□□□□ -0.97
CPSF4-202ENST00000412686 COBLO75128 1261 aa9□□□□□ -0.97
CPSF4-202ENST00000412686 PLEKHA8P1O95397 391 aa9□□□□□ -0.97
CPSF4-202ENST00000412686 SLC25A27O95847 323 aa9□□□□□ -0.97
CPSF4-202ENST00000412686 PGK2P07205 417 aa9□□□□□ -0.97
CPSF4-202ENST00000412686 ALAS1P13196 640 aa9□□□□□ -0.97
CPSF4-202ENST00000412686 RPS6KB1P23443 525 aa9□□□□□ -0.97
CPSF4-202ENST00000412686 ADORA2AP29274 412 aa9□□□□□ -0.97
CPSF4-202ENST00000412686 GRK4P32298 578 aa9□□□□□ -0.97
CPSF4-202ENST00000412686 LIFRP42702 1097 aa9□□□□□ -0.97
CPSF4-202ENST00000412686 PRMT2P55345 433 aa9□□□□□ -0.97
CPSF4-202ENST00000412686 MAP2K5Q13163 448 aa9□□□□□ -0.97
CPSF4-202ENST00000412686 IRF5Q13568 498 aa9□□□□□ -0.97
CPSF4-202ENST00000412686 MTFR1Q15390 333 aa9□□□□□ -0.97
CPSF4-202ENST00000412686 CDC37Q16543 378 aaPredicted RBP9□□□□□ -0.97
CPSF4-202ENST00000412686 Q6ZUG5 572 aa9□□□□□ -0.97
CPSF4-202ENST00000412686 MICU3Q86XE3 530 aa9□□□□□ -0.97
CPSF4-202ENST00000412686 ADGRF4Q8IZF3 695 aa9□□□□□ -0.97
CPSF4-202ENST00000412686 SOCS4Q8WXH5 440 aa9□□□□□ -0.97
CPSF4-202ENST00000412686 PIBF1Q8WXW3 757 aa9□□□□□ -0.97
CPSF4-202ENST00000412686 ARMC5Q96C12 935 aa9□□□□□ -0.97
CPSF4-202ENST00000412686 MMP19Q99542 508 aa9□□□□□ -0.97
CPSF4-202ENST00000412686 LARP6Q9BRS8 491 aaKnown RBP9□□□□□ -0.97
CPSF4-202ENST00000412686 MTA3Q9BTC8 594 aa9□□□□□ -0.97
CPSF4-202ENST00000412686 MROH8Q9H579 483 aa9□□□□□ -0.97
CPSF4-202ENST00000412686 JMJD4Q9H9V9 463 aa9□□□□□ -0.97
CPSF4-202ENST00000412686 RNF146Q9NTX7 359 aa9□□□□□ -0.97
CPSF4-202ENST00000412686 CCPG1Q9ULG6 757 aa9□□□□□ -0.97
CPSF4-202ENST00000412686 IVNS1ABPQ9Y6Y0 642 aa9□□□□□ -0.97
CPSF4-202ENST00000412686 WDR19Q8NEZ3 1342 aa9□□□□□ -0.97
CPSF4-202ENST00000412686 KLF18A0A0U1RQI7 1052 aa8.99□□□□□ -0.97
CPSF4-202ENST00000412686 SLC15A5A6NIM6 579 aa8.99□□□□□ -0.97
CPSF4-202ENST00000412686 KLRF2D3W0D1 207 aa8.99□□□□□ -0.97
CPSF4-202ENST00000412686 NFIBO00712 420 aa8.99□□□□□ -0.97
CPSF4-202ENST00000412686 PPP1R11O60927 126 aaPredicted RBP8.99□□□□□ -0.97
CPSF4-202ENST00000412686 DDAH1O94760 285 aa8.99□□□□□ -0.97
CPSF4-202ENST00000412686 INHAP05111 366 aa8.99□□□□□ -0.97
CPSF4-202ENST00000412686 ICAM1P05362 532 aa8.99□□□□□ -0.97
CPSF4-202ENST00000412686 FCER1AP12319 257 aa8.99□□□□□ -0.97
CPSF4-202ENST00000412686 RGS2P41220 211 aa8.99□□□□□ -0.97
CPSF4-202ENST00000412686 OAZ1P54368 228 aa8.99□□□□□ -0.97
CPSF4-202ENST00000412686 SOX10P56693 466 aa8.99□□□□□ -0.97
CPSF4-202ENST00000412686 APOBRQ0VD83 1088 aa8.99□□□□□ -0.97
CPSF4-202ENST00000412686 QRICH1Q2TAL8 776 aa8.99□□□□□ -0.97
CPSF4-202ENST00000412686 USH1GQ495M9 461 aa8.99□□□□□ -0.97
CPSF4-202ENST00000412686 APOA5Q6Q788 366 aa8.99□□□□□ -0.97
CPSF4-202ENST00000412686 SGMS1Q86VZ5 419 aa8.99□□□□□ -0.97
CPSF4-202ENST00000412686 HOMER1Q86YM7 354 aa8.99□□□□□ -0.97
CPSF4-202ENST00000412686 SLAIN1Q8ND83 568 aa8.99□□□□□ -0.97
CPSF4-202ENST00000412686 BRF1Q92994 677 aa8.99□□□□□ -0.97
CPSF4-202ENST00000412686 FAM212AQ96EL1 285 aa8.99□□□□□ -0.97
CPSF4-202ENST00000412686 ZNF333Q96JL9 665 aa8.99□□□□□ -0.97
CPSF4-202ENST00000412686 TRERF1Q96PN7 1200 aa8.99□□□□□ -0.97
CPSF4-202ENST00000412686 PURBQ96QR8 312 aaKnown RBP8.99□□□□□ -0.97
CPSF4-202ENST00000412686 APBA2Q99767 749 aa8.99□□□□□ -0.97
CPSF4-202ENST00000412686 TSPYL2Q9H2G4 693 aaPredicted RBP8.99□□□□□ -0.97
CPSF4-202ENST00000412686 ZSWIM6Q9HCJ5 1215 aa8.99□□□□□ -0.97
CPSF4-202ENST00000412686 NAP1L2Q9ULW6 460 aaPredicted RBP8.99□□□□□ -0.97
CPSF4-202ENST00000412686 SLC12A7Q9Y666 1083 aa8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms