RNA–Protein interactions for RNA: ENST00000410731.1

RNU4-55P-201, Transcript of RNA, U4 small nuclear 55, pseudogene, humanhuman

BASIC

Gene RNU4-55P, Length 137 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-55P-201ENST00000410731 PEX10O60683 326 aa5.66□□□□□ -1.5
RNU4-55P-201ENST00000410731 PNLIPP16233 465 aa5.66□□□□□ -1.5
RNU4-55P-201ENST00000410731 ATF4P18848 351 aaPredicted RBP5.66□□□□□ -1.5
RNU4-55P-201ENST00000410731 GLDCP23378 1020 aa5.66□□□□□ -1.5
RNU4-55P-201ENST00000410731 PDE6BP35913 854 aa5.66□□□□□ -1.5
RNU4-55P-201ENST00000410731 GALK1P51570 392 aa5.66□□□□□ -1.5
RNU4-55P-201ENST00000410731 GALNT18Q6P9A2 607 aa5.66□□□□□ -1.5
RNU4-55P-201ENST00000410731 CILP2Q8IUL8 1156 aa5.66□□□□□ -1.5
RNU4-55P-201ENST00000410731 FAM169BQ8N8A8 192 aa5.66□□□□□ -1.5
RNU4-55P-201ENST00000410731 KLHL6Q8WZ60 621 aa5.66□□□□□ -1.5
RNU4-55P-201ENST00000410731 PLCD4Q9BRC7 762 aa5.66□□□□□ -1.5
RNU4-55P-201ENST00000410731 KLHL25Q9H0H3 589 aa5.66□□□□□ -1.5
RNU4-55P-201ENST00000410731 GBP3Q9H0R5 595 aa5.66□□□□□ -1.5
RNU4-55P-201ENST00000410731 ZNF552Q9H707 407 aaPredicted RBP5.66□□□□□ -1.5
RNU4-55P-201ENST00000410731 KCNK12Q9HB15 430 aa5.66□□□□□ -1.5
RNU4-55P-201ENST00000410731 OR14I1A6ND48 311 aa5.65□□□□□ -1.5
RNU4-55P-201ENST00000410731 HRKO00198 91 aa5.65□□□□□ -1.5
RNU4-55P-201ENST00000410731 SEMA7AO75326 666 aa5.65□□□□□ -1.5
RNU4-55P-201ENST00000410731 GSTM1P09488 218 aa5.65□□□□□ -1.5
RNU4-55P-201ENST00000410731 TMEM253P0C7T8 217 aa5.65□□□□□ -1.5
RNU4-55P-201ENST00000410731 ADGRF1Q5T601 910 aa5.65□□□□□ -1.5
RNU4-55P-201ENST00000410731 HEATR6Q6AI08 1181 aaKnown RBP5.65□□□□□ -1.5
RNU4-55P-201ENST00000410731 CYP2R1Q6VVX0 501 aa5.65□□□□□ -1.5
RNU4-55P-201ENST00000410731 ZNF605Q86T29 641 aa5.65□□□□□ -1.5
RNU4-55P-201ENST00000410731 SIRT2Q8IXJ6 389 aa5.65□□□□□ -1.5
RNU4-55P-201ENST00000410731 NAT16Q8N8M0 369 aa5.65□□□□□ -1.5
RNU4-55P-201ENST00000410731 MCOLN1Q9GZU1 580 aa5.65□□□□□ -1.5
RNU4-55P-201ENST00000410731 NOL6Q9H6R4 1146 aaKnown RBP5.65□□□□□ -1.5
RNU4-55P-201ENST00000410731 CAPN10Q9HC96 672 aa5.65□□□□□ -1.5
RNU4-55P-201ENST00000410731 CD320Q9NPF0 282 aa5.65□□□□□ -1.5
RNU4-55P-201ENST00000410731 PCDHB10Q9UN67 800 aa5.65□□□□□ -1.5
RNU4-55P-201ENST00000410731 DIS3Q9Y2L1 958 aaKnown RBP5.65□□□□□ -1.5
RNU4-55P-201ENST00000410731 MYOCOSA0A1B0GUC4 107 aa5.64□□□□□ -1.51
RNU4-55P-201ENST00000410731 FGF10O15520 208 aaPredicted RBP5.64□□□□□ -1.51
RNU4-55P-201ENST00000410731 EPHX1P07099 455 aa5.64□□□□□ -1.51
RNU4-55P-201ENST00000410731 C1QTNF9P0C862 333 aa5.64□□□□□ -1.51
RNU4-55P-201ENST00000410731 NOP2P46087 812 aaKnown RBP5.64□□□□□ -1.51
RNU4-55P-201ENST00000410731 ERVFRD-1P60508 538 aa5.64□□□□□ -1.51
RNU4-55P-201ENST00000410731 POU4F1Q01851 419 aa5.64□□□□□ -1.51
RNU4-55P-201ENST00000410731 PPP2R5EQ16537 467 aa5.64□□□□□ -1.51
RNU4-55P-201ENST00000410731 ANKLE2Q86XL3 938 aa5.64□□□□□ -1.51
RNU4-55P-201ENST00000410731 TMEM52Q8NDY8 209 aa5.64□□□□□ -1.51
RNU4-55P-201ENST00000410731 ZNF428Q96B54 188 aa5.64□□□□□ -1.51
RNU4-55P-201ENST00000410731 ZDHHC15Q96MV8 337 aa5.64□□□□□ -1.51
RNU4-55P-201ENST00000410731 TOX2Q96NM4 488 aa5.64□□□□□ -1.51
RNU4-55P-201ENST00000410731 ACSL6Q9UKU0 697 aa5.64□□□□□ -1.51
RNU4-55P-201ENST00000410731 TEX51A0A1B0GUA7 166 aa5.63□□□□□ -1.51
RNU4-55P-201ENST00000410731 TCAF2A6NFQ2 919 aa5.63□□□□□ -1.51
RNU4-55P-201ENST00000410731 ETV2O00321 342 aaPredicted RBP5.63□□□□□ -1.51
RNU4-55P-201ENST00000410731 PPM1BO75688 479 aa5.63□□□□□ -1.51
RNU4-55P-201ENST00000410731 CD3EP07766 207 aa5.63□□□□□ -1.51
RNU4-55P-201ENST00000410731 LAPTM5Q13571 262 aa5.63□□□□□ -1.51
RNU4-55P-201ENST00000410731 HLA-DQA1Q5Y7H0 255 aa5.63□□□□□ -1.51
RNU4-55P-201ENST00000410731 VHLLQ6RSH7 139 aa5.63□□□□□ -1.51
RNU4-55P-201ENST00000410731 ATG14Q6ZNE5 492 aa5.63□□□□□ -1.51
RNU4-55P-201ENST00000410731 ANAPC16Q96DE5 110 aa5.63□□□□□ -1.51
RNU4-55P-201ENST00000410731 FCRL3Q96P31 734 aaPredicted RBP5.63□□□□□ -1.51
RNU4-55P-201ENST00000410731 JMJD8Q96S16 334 aa5.63□□□□□ -1.51
RNU4-55P-201ENST00000410731 SUSD2Q9UGT4 822 aa5.63□□□□□ -1.51
RNU4-55P-201ENST00000410731 KRTAP4-8A0A0G2JLE6 195 aa5.62□□□□□ -1.51
RNU4-55P-201ENST00000410731 IFNGR1P15260 489 aa5.62□□□□□ -1.51
RNU4-55P-201ENST00000410731 PRKCAP17252 672 aa5.62□□□□□ -1.51
RNU4-55P-201ENST00000410731 ARL4AP40617 200 aa5.62□□□□□ -1.51
RNU4-55P-201ENST00000410731 GNL2Q13823 731 aaKnown RBP5.62□□□□□ -1.51
RNU4-55P-201ENST00000410731 PPP2R5DQ14738 602 aa5.62□□□□□ -1.51
RNU4-55P-201ENST00000410731 KIR3DS1Q14943 382 aa5.62□□□□□ -1.51
RNU4-55P-201ENST00000410731 RCSD1Q6JBY9 416 aa5.62□□□□□ -1.51
RNU4-55P-201ENST00000410731 KIAA1211LQ6NV74 962 aa5.62□□□□□ -1.51
RNU4-55P-201ENST00000410731 VPS37DQ86XT2 251 aa5.62□□□□□ -1.51
RNU4-55P-201ENST00000410731 C1QL4Q86Z23 238 aa5.62□□□□□ -1.51
RNU4-55P-201ENST00000410731 NUP43Q8NFH3 380 aa5.62□□□□□ -1.51
RNU4-55P-201ENST00000410731 ADCY4Q8NFM4 1077 aa5.62□□□□□ -1.51
RNU4-55P-201ENST00000410731 KCNN1Q92952 543 aa5.62□□□□□ -1.51
RNU4-55P-201ENST00000410731 RCC1LQ96I51 464 aaKnown RBP5.62□□□□□ -1.51
RNU4-55P-201ENST00000410731 TNFRSF12AQ9NP84 129 aa5.62□□□□□ -1.51
RNU4-55P-201ENST00000410731 IMPACTQ9P2X3 320 aa5.62□□□□□ -1.51
RNU4-55P-201ENST00000410731 CGGBP1Q9UFW8 167 aaPredicted RBP5.62□□□□□ -1.51
RNU4-55P-201ENST00000410731 ANKRD34BA5PLL1 514 aa5.61□□□□□ -1.51
RNU4-55P-201ENST00000410731 AURKAO14965 403 aa5.61□□□□□ -1.51
RNU4-55P-201ENST00000410731 ZNF143P52747 638 aaPredicted RBP5.61□□□□□ -1.51
RNU4-55P-201ENST00000410731 YBX1P67809 324 aaKnown RBP5.61□□□□□ -1.51
RNU4-55P-201ENST00000410731 DLG4P78352 724 aa5.61□□□□□ -1.51
RNU4-55P-201ENST00000410731 CYP4F8P98187 520 aa5.61□□□□□ -1.51
RNU4-55P-201ENST00000410731 GRB10Q13322 594 aa5.61□□□□□ -1.51
RNU4-55P-201ENST00000410731 NCAPHQ15003 741 aa5.61□□□□□ -1.51
RNU4-55P-201ENST00000410731 KCNA10Q16322 511 aa5.61□□□□□ -1.51
RNU4-55P-201ENST00000410731 KRTAP19-4Q3LI73 84 aa5.61□□□□□ -1.51
RNU4-55P-201ENST00000410731 OLFML2BQ68BL8 750 aa5.61□□□□□ -1.51
RNU4-55P-201ENST00000410731 ADAT2Q7Z6V5 191 aaKnown RBP5.61□□□□□ -1.51
RNU4-55P-201ENST00000410731 LRRC56Q8IYG6 542 aaPredicted RBP5.61□□□□□ -1.51
RNU4-55P-201ENST00000410731 ARHGEF39Q8N4T4 335 aa5.61□□□□□ -1.51
RNU4-55P-201ENST00000410731 ZNF513Q8N8E2 541 aaPredicted RBP5.61□□□□□ -1.51
RNU4-55P-201ENST00000410731 FGD4Q96M96 766 aa5.61□□□□□ -1.51
RNU4-55P-201ENST00000410731 PTCHD1Q96NR3 888 aa5.61□□□□□ -1.51
RNU4-55P-201ENST00000410731 TINF2Q9BSI4 451 aa5.61□□□□□ -1.51
RNU4-55P-201ENST00000410731 GCM1Q9NP62 436 aa5.61□□□□□ -1.51
RNU4-55P-201ENST00000410731 SMG5Q9UPR3 1016 aaKnown RBP5.61□□□□□ -1.51
RNU4-55P-201ENST00000410731 NPIPB6E9PJ23 425 aa5.6□□□□□ -1.51
RNU4-55P-201ENST00000410731 ABLIM1O14639 778 aa5.6□□□□□ -1.51
RNU4-55P-201ENST00000410731 SMAD7O15105 426 aaKnown RBP5.6□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms