RNA–Protein interactions for RNA: ENST00000409783.6

PTCD3-203, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 5

Gene PTCD3, Length 587 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-203ENST00000409783 IVNS1ABPQ9Y6Y0 642 aa26.1■■□□□ 1.77
PTCD3-203ENST00000409783 CCDC69A6NI79 296 aa26.09■■□□□ 1.77
PTCD3-203ENST00000409783 KLRF2D3W0D1 207 aa26.09■■□□□ 1.77
PTCD3-203ENST00000409783 EIF5BO60841 1220 aaKnown RBP26.09■■□□□ 1.77
PTCD3-203ENST00000409783 ICAM1P05362 532 aa26.09■■□□□ 1.77
PTCD3-203ENST00000409783 XRCC5P13010 732 aaKnown RBP26.09■■□□□ 1.77
PTCD3-203ENST00000409783 CYP2B6P20813 491 aa26.09■■□□□ 1.77
PTCD3-203ENST00000409783 GRK4P32298 578 aa26.09■■□□□ 1.77
PTCD3-203ENST00000409783 ADGRF4Q8IZF3 695 aa26.09■■□□□ 1.77
PTCD3-203ENST00000409783 FBXL16Q8N461 479 aa26.09■■□□□ 1.77
PTCD3-203ENST00000409783 SH3TC2Q8TF17 1288 aa26.09■■□□□ 1.77
PTCD3-203ENST00000409783 IL17RAQ96F46 866 aa26.09■■□□□ 1.77
PTCD3-203ENST00000409783 TM6SF1Q9BZW5 370 aa26.09■■□□□ 1.77
PTCD3-203ENST00000409783 JMJD4Q9H9V9 463 aa26.09■■□□□ 1.77
PTCD3-203ENST00000409783 ZSWIM6Q9HCJ5 1215 aa26.09■■□□□ 1.77
PTCD3-203ENST00000409783 MYH6P13533 1939 aa26.09■■□□□ 1.77
PTCD3-203ENST00000409783 BAZ2BQ9UIF8 2168 aaKnown RBP26.08■■□□□ 1.77
PTCD3-203ENST00000409783 HOXC6P09630 235 aa26.08■■□□□ 1.77
PTCD3-203ENST00000409783 ELNP15502 786 aa26.08■■□□□ 1.77
PTCD3-203ENST00000409783 TAL1P17542 331 aaPredicted RBP26.08■■□□□ 1.77
PTCD3-203ENST00000409783 CASTP20810 708 aaKnown RBP26.08■■□□□ 1.77
PTCD3-203ENST00000409783 ADORA2AP29274 412 aa26.08■■□□□ 1.77
PTCD3-203ENST00000409783 RGS2P41220 211 aa26.08■■□□□ 1.77
PTCD3-203ENST00000409783 SLC9C1Q4G0N8 1177 aa26.08■■□□□ 1.77
PTCD3-203ENST00000409783 NFXL1Q6ZNB6 911 aa26.08■■□□□ 1.77
PTCD3-203ENST00000409783 NBPF11Q86T75 865 aa26.08■■□□□ 1.77
PTCD3-203ENST00000409783 SLAIN1Q8ND83 568 aa26.08■■□□□ 1.77
PTCD3-203ENST00000409783 AGXT2Q9BYV1 514 aa26.08■■□□□ 1.77
PTCD3-203ENST00000409783 BRPF3Q9ULD4 1205 aa26.08■■□□□ 1.77
PTCD3-203ENST00000409783 CENPFP49454 3210 aa26.08■■□□□ 1.77
PTCD3-203ENST00000409783 PLXNA1Q9UIW2 1896 aa26.07■■□□□ 1.76
PTCD3-203ENST00000409783 COBLO75128 1261 aa26.07■■□□□ 1.76
PTCD3-203ENST00000409783 FCER1AP12319 257 aa26.07■■□□□ 1.76
PTCD3-203ENST00000409783 CHST13Q8NET6 341 aa26.07■■□□□ 1.76
PTCD3-203ENST00000409783 NPLOC4Q8TAT6 608 aa26.07■■□□□ 1.76
PTCD3-203ENST00000409783 NUP133Q8WUM0 1156 aa26.07■■□□□ 1.76
PTCD3-203ENST00000409783 MTMR8Q96EF0 704 aa26.07■■□□□ 1.76
PTCD3-203ENST00000409783 ZNF333Q96JL9 665 aa26.07■■□□□ 1.76
PTCD3-203ENST00000409783 APBA2Q99767 749 aa26.07■■□□□ 1.76
PTCD3-203ENST00000409783 IGHA2P01877 340 aa26.06■■□□□ 1.76
PTCD3-203ENST00000409783 SLC4A3P48751 1232 aa26.06■■□□□ 1.76
PTCD3-203ENST00000409783 ANAPC15P60006 121 aa26.06■■□□□ 1.76
PTCD3-203ENST00000409783 TKFCQ3LXA3 575 aa26.06■■□□□ 1.76
PTCD3-203ENST00000409783 APOA5Q6Q788 366 aa26.06■■□□□ 1.76
PTCD3-203ENST00000409783 Q6ZUG5 572 aa26.06■■□□□ 1.76
PTCD3-203ENST00000409783 RUFY3Q7L099 469 aa26.06■■□□□ 1.76
PTCD3-203ENST00000409783 TRIB2Q92519 343 aa26.06■■□□□ 1.76
PTCD3-203ENST00000409783 MMP19Q99542 508 aa26.06■■□□□ 1.76
PTCD3-203ENST00000409783 RIOX1Q9H6W3 641 aa26.06■■□□□ 1.76
PTCD3-203ENST00000409783 CCPG1Q9ULG6 757 aa26.06■■□□□ 1.76
PTCD3-203ENST00000409783 SLC12A7Q9Y666 1083 aa26.06■■□□□ 1.76
PTCD3-203ENST00000409783 CYTH3O43739 400 aa26.05■■□□□ 1.76
PTCD3-203ENST00000409783 RXRAP19793 462 aa26.05■■□□□ 1.76
PTCD3-203ENST00000409783 CDC37Q16543 378 aaPredicted RBP26.05■■□□□ 1.76
PTCD3-203ENST00000409783 CCL14Q16627 93 aa26.05■■□□□ 1.76
PTCD3-203ENST00000409783 TRERF1Q96PN7 1200 aa26.05■■□□□ 1.76
PTCD3-203ENST00000409783 RNF146Q9NTX7 359 aa26.05■■□□□ 1.76
PTCD3-203ENST00000409783 FBXO40Q9UH90 709 aa26.05■■□□□ 1.76
PTCD3-203ENST00000409783 CALM1P0DP23 149 aa26.04■■□□□ 1.76
PTCD3-203ENST00000409783 CALM2P0DP24 149 aa26.04■■□□□ 1.76
PTCD3-203ENST00000409783 CALM3P0DP25 149 aa26.04■■□□□ 1.76
PTCD3-203ENST00000409783 ALAS1P13196 640 aa26.04■■□□□ 1.76
PTCD3-203ENST00000409783 MUM1L1Q5H9M0 696 aa26.04■■□□□ 1.76
PTCD3-203ENST00000409783 RAB11FIP4Q86YS3 637 aa26.04■■□□□ 1.76
PTCD3-203ENST00000409783 VAT1LQ9HCJ6 419 aa26.04■■□□□ 1.76
PTCD3-203ENST00000409783 HOMER2Q9NSB8 354 aa26.04■■□□□ 1.76
PTCD3-203ENST00000409783 FLRT1Q9NZU1 646 aa26.04■■□□□ 1.76
PTCD3-203ENST00000409783 DNAJC25-GNG10A0A024R161 153 aa26.03■■□□□ 1.76
PTCD3-203ENST00000409783 KCTD2Q14681 263 aa26.03■■□□□ 1.76
PTCD3-203ENST00000409783 QRICH1Q2TAL8 776 aa26.03■■□□□ 1.76
PTCD3-203ENST00000409783 FANCBQ8NB91 859 aa26.03■■□□□ 1.76
PTCD3-203ENST00000409783 CTCFLQ8NI51 663 aaPredicted RBP26.03■■□□□ 1.76
PTCD3-203ENST00000409783 UPF3BQ9BZI7 483 aaKnown RBP26.03■■□□□ 1.76
PTCD3-203ENST00000409783 ACAD9Q9H845 621 aa26.03■■□□□ 1.76
PTCD3-203ENST00000409783 CYP46A1Q9Y6A2 500 aa26.03■■□□□ 1.76
PTCD3-203ENST00000409783 LCTP09848 1927 aa26.02■■□□□ 1.76
PTCD3-203ENST00000409783 PGK2P07205 417 aa26.02■■□□□ 1.76
PTCD3-203ENST00000409783 KIF5BP33176 963 aa26.02■■□□□ 1.76
PTCD3-203ENST00000409783 TRIM32Q13049 653 aa26.02■■□□□ 1.76
PTCD3-203ENST00000409783 ZNF792Q3KQV3 632 aa26.02■■□□□ 1.76
PTCD3-203ENST00000409783 DPP9Q86TI2 863 aa26.02■■□□□ 1.76
PTCD3-203ENST00000409783 MICU3Q86XE3 530 aa26.02■■□□□ 1.76
PTCD3-203ENST00000409783 CLEC4DQ8WXI8 215 aa26.02■■□□□ 1.76
PTCD3-203ENST00000409783 BRF1Q92994 677 aa26.02■■□□□ 1.76
PTCD3-203ENST00000409783 PNMA2Q9UL42 364 aa26.02■■□□□ 1.76
PTCD3-203ENST00000409783 KLF18A0A0U1RQI7 1052 aa26.01■■□□□ 1.75
PTCD3-203ENST00000409783 PLEKHA8P1O95397 391 aa26.01■■□□□ 1.75
PTCD3-203ENST00000409783 HMGCRP04035 888 aa26.01■■□□□ 1.75
PTCD3-203ENST00000409783 INHAP05111 366 aa26.01■■□□□ 1.75
PTCD3-203ENST00000409783 SMARCA1P28370 1054 aa26.01■■□□□ 1.75
PTCD3-203ENST00000409783 APOBRQ0VD83 1088 aa26.01■■□□□ 1.75
PTCD3-203ENST00000409783 TOB2Q14106 344 aaPredicted RBP26.01■■□□□ 1.75
PTCD3-203ENST00000409783 CCDC144CPQ8IYA2 1237 aa26.01■■□□□ 1.75
PTCD3-203ENST00000409783 TRMT44Q8IYL2 757 aaKnown RBP26.01■■□□□ 1.75
PTCD3-203ENST00000409783 SPZ1Q9BXG8 430 aa26.01■■□□□ 1.75
PTCD3-203ENST00000409783 A1CFQ9NQ94 594 aaKnown RBP26.01■■□□□ 1.75
PTCD3-203ENST00000409783 RBBP6Q7Z6E9 1792 aaKnown RBP26■■□□□ 1.75
PTCD3-203ENST00000409783 DHX16O60231 1041 aaKnown RBP26■■□□□ 1.75
PTCD3-203ENST00000409783 PPP1R11O60927 126 aaPredicted RBP26■■□□□ 1.75
PTCD3-203ENST00000409783 RCAN1P53805 252 aa26■■□□□ 1.75
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms