RNA–Protein interactions for RNA: ENST00000403433.5

CHTOP-205, Transcript of chromatin target of PRMT1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CHTOP, Length 1,923 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHTOP-205ENST00000403433 UBA5Q9GZZ9 404 aa20.21■□□□□ 0.83
CHTOP-205ENST00000403433 CCNT1O60563 726 aaKnown RBP20.21■□□□□ 0.83
CHTOP-205ENST00000403433 EIF6P56537 245 aaKnown RBP20.21■□□□□ 0.83
CHTOP-205ENST00000403433 ZNF658Q5TYW1 1059 aaPredicted RBP20.21■□□□□ 0.83
CHTOP-205ENST00000403433 CDKAL1Q5VV42 579 aa20.21■□□□□ 0.83
CHTOP-205ENST00000403433 KIF18AQ8NI77 898 aa20.21■□□□□ 0.83
CHTOP-205ENST00000403433 CTAGE1Q96RT6 745 aa20.21■□□□□ 0.83
CHTOP-205ENST00000403433 PP2D1A8MPX8 630 aa20.2■□□□□ 0.82
CHTOP-205ENST00000403433 NR1I3Q14994 352 aa20.2■□□□□ 0.82
CHTOP-205ENST00000403433 MSL1Q68DK7 614 aa20.2■□□□□ 0.82
CHTOP-205ENST00000403433 AK8Q96MA6 479 aa20.2■□□□□ 0.82
CHTOP-205ENST00000403433 RWDD2AQ9UIY3 292 aa20.2■□□□□ 0.82
CHTOP-205ENST00000403433 GREB1LQ9C091 1923 aaPredicted RBP20.2■□□□□ 0.82
CHTOP-205ENST00000403433 MYH4Q9Y623 1939 aa20.2■□□□□ 0.82
CHTOP-205ENST00000403433 SNHG28P0DPA3 235 aa20.19■□□□□ 0.82
CHTOP-205ENST00000403433 GOLGA8FQ08AF8 430 aa20.19■□□□□ 0.82
CHTOP-205ENST00000403433 GOLGA8DPQ0D2H9 430 aa20.19■□□□□ 0.82
CHTOP-205ENST00000403433 PAK1Q13153 545 aa20.19■□□□□ 0.82
CHTOP-205ENST00000403433 ORC2Q13416 577 aaPredicted RBP20.19■□□□□ 0.82
CHTOP-205ENST00000403433 FILIP1LQ4L180 1135 aa20.19■□□□□ 0.82
CHTOP-205ENST00000403433 ZNF772Q68DY9 489 aaPredicted RBP20.19■□□□□ 0.82
CHTOP-205ENST00000403433 PODNQ7Z5L7 613 aa20.19■□□□□ 0.82
CHTOP-205ENST00000403433 FCHSD1Q86WN1 690 aa20.19■□□□□ 0.82
CHTOP-205ENST00000403433 C2CD5Q86YS7 1000 aa20.19■□□□□ 0.82
CHTOP-205ENST00000403433 ARHGAP6O43182 974 aa20.19■□□□□ 0.82
CHTOP-205ENST00000403433 MYL1P05976 194 aa20.19■□□□□ 0.82
CHTOP-205ENST00000403433 SHMT1P34896 483 aa20.19■□□□□ 0.82
CHTOP-205ENST00000403433 CRKP46108 304 aa20.19■□□□□ 0.82
CHTOP-205ENST00000403433 APOBEC3HQ6NTF7 200 aaKnown RBP20.19■□□□□ 0.82
CHTOP-205ENST00000403433 CLEC10AQ8IUN9 316 aa20.19■□□□□ 0.82
CHTOP-205ENST00000403433 DBNDD1Q9H9R9 158 aa20.19■□□□□ 0.82
CHTOP-205ENST00000403433 TUBB4AP04350 444 aa20.18■□□□□ 0.82
CHTOP-205ENST00000403433 ADCY7P51828 1080 aa20.18■□□□□ 0.82
CHTOP-205ENST00000403433 NAALADL2Q58DX5 795 aa20.18■□□□□ 0.82
CHTOP-205ENST00000403433 APTXQ7Z2E3 356 aaKnown RBP20.18■□□□□ 0.82
CHTOP-205ENST00000403433 BAG1Q99933 345 aaPredicted RBP20.18■□□□□ 0.82
CHTOP-205ENST00000403433 CUEDC2Q9H467 287 aa20.18■□□□□ 0.82
CHTOP-205ENST00000403433 MAGEF1Q9HAY2 307 aa20.18■□□□□ 0.82
CHTOP-205ENST00000403433 GPCPD1Q9NPB8 672 aa20.18■□□□□ 0.82
CHTOP-205ENST00000403433 MPHOSPH10O00566 681 aaKnown RBP20.17■□□□□ 0.82
CHTOP-205ENST00000403433 ZNF543Q08ER8 600 aa20.17■□□□□ 0.82
CHTOP-205ENST00000403433 PPP4R3BQ5MIZ7 849 aa20.17■□□□□ 0.82
CHTOP-205ENST00000403433 JAKMIP3Q5VZ66 844 aa20.17■□□□□ 0.82
CHTOP-205ENST00000403433 CABP7Q86V35 215 aa20.17■□□□□ 0.82
CHTOP-205ENST00000403433 ZNF710Q8N1W2 664 aa20.17■□□□□ 0.82
CHTOP-205ENST00000403433 TBCKQ8TEA7 893 aa20.17■□□□□ 0.82
CHTOP-205ENST00000403433 NELFBQ8WX92 580 aa20.17■□□□□ 0.82
CHTOP-205ENST00000403433 ZDHHC15Q96MV8 337 aa20.17■□□□□ 0.82
CHTOP-205ENST00000403433 EHD4Q9H223 541 aa20.17■□□□□ 0.82
CHTOP-205ENST00000403433 BIN2Q9UBW5 565 aaPredicted RBP20.17■□□□□ 0.82
CHTOP-205ENST00000403433 STYK1Q6J9G0 422 aa20.17■□□□□ 0.82
CHTOP-205ENST00000403433 PPP1R18Q6NYC8 613 aa20.17■□□□□ 0.82
CHTOP-205ENST00000403433 TMEM139Q8IV31 216 aa20.17■□□□□ 0.82
CHTOP-205ENST00000403433 TC2NQ8N9U0 490 aa20.17■□□□□ 0.82
CHTOP-205ENST00000403433 ADD3Q9UEY8 706 aaKnown RBP20.17■□□□□ 0.82
CHTOP-205ENST00000403433 SPAG1Q07617 926 aa20.16■□□□□ 0.82
CHTOP-205ENST00000403433 KCNB1Q14721 858 aa20.16■□□□□ 0.82
CHTOP-205ENST00000403433 H0YIN7 160 aa20.15■□□□□ 0.82
CHTOP-205ENST00000403433 ZSCAN12O43309 604 aa20.15■□□□□ 0.82
CHTOP-205ENST00000403433 STX10O60499 249 aa20.15■□□□□ 0.82
CHTOP-205ENST00000403433 FKBP1AP62942 108 aaKnown RBP20.15■□□□□ 0.82
CHTOP-205ENST00000403433 ATP2B2Q01814 1243 aa20.15■□□□□ 0.82
CHTOP-205ENST00000403433 NFIAQ12857 509 aa20.15■□□□□ 0.82
CHTOP-205ENST00000403433 SEMA3FQ13275 785 aa20.15■□□□□ 0.82
CHTOP-205ENST00000403433 SYCP1Q15431 976 aa20.15■□□□□ 0.82
CHTOP-205ENST00000403433 CCDC96Q2M329 555 aa20.15■□□□□ 0.82
CHTOP-205ENST00000403433 ANKRD20A12PQ8NF67 263 aa20.15■□□□□ 0.82
CHTOP-205ENST00000403433 COA7Q96BR5 231 aa20.15■□□□□ 0.82
CHTOP-205ENST00000403433 CCDC17Q96LX7 622 aa20.15■□□□□ 0.82
CHTOP-205ENST00000403433 PLIN2Q99541 437 aa20.15■□□□□ 0.82
CHTOP-205ENST00000403433 KBTBD4Q9NVX7 518 aa20.15■□□□□ 0.82
CHTOP-205ENST00000403433 TMEM260Q9NX78 707 aa20.15■□□□□ 0.82
CHTOP-205ENST00000403433 TNS1Q9HBL0 1735 aaKnown RBP20.15■□□□□ 0.82
CHTOP-205ENST00000403433 RGPD3A6NKT7 1758 aaPredicted RBP20.15■□□□□ 0.82
CHTOP-205ENST00000403433 RGPD4Q7Z3J3 1758 aa20.15■□□□□ 0.82
CHTOP-205ENST00000403433 TEX33O43247 280 aa20.15■□□□□ 0.82
CHTOP-205ENST00000403433 ADKP55263 362 aaKnown RBP20.15■□□□□ 0.82
CHTOP-205ENST00000403433 GPATCH4Q5T3I0 446 aaKnown RBP20.15■□□□□ 0.82
CHTOP-205ENST00000403433 STRIP1Q5VSL9 837 aa20.15■□□□□ 0.82
CHTOP-205ENST00000403433 PPFIBP1Q86W92 1011 aa20.15■□□□□ 0.82
CHTOP-205ENST00000403433 KIAA0825Q8IV33 1275 aa20.15■□□□□ 0.82
CHTOP-205ENST00000403433 GDAQ9Y2T3 454 aa20.15■□□□□ 0.82
CHTOP-205ENST00000403433 ZNF646O15015 1829 aaPredicted RBP20.14■□□□□ 0.82
CHTOP-205ENST00000403433 SIPA1L1O43166 1804 aa20.14■□□□□ 0.82
CHTOP-205ENST00000403433 SLX4Q8IY92 1834 aa20.14■□□□□ 0.82
CHTOP-205ENST00000403433 PNMA6FA0A0J9YX94 578 aa20.14■□□□□ 0.81
CHTOP-205ENST00000403433 AKR1B15C9JRZ8 316 aaPredicted RBP20.14■□□□□ 0.81
CHTOP-205ENST00000403433 ECE2O60344 883 aa20.14■□□□□ 0.81
CHTOP-205ENST00000403433 PLCG1P19174 1290 aa20.14■□□□□ 0.81
CHTOP-205ENST00000403433 IGSF22Q8N9C0 903 aa20.14■□□□□ 0.81
CHTOP-205ENST00000403433 DHX36Q9H2U1 1008 aaKnown RBP20.14■□□□□ 0.81
CHTOP-205ENST00000403433 JMJD4Q9H9V9 463 aa20.14■□□□□ 0.81
CHTOP-205ENST00000403433 PRCPP42785 496 aa20.14■□□□□ 0.81
CHTOP-205ENST00000403433 RBM5P52756 815 aaKnown RBP eCLIP20.14■□□□□ 0.81
CHTOP-205ENST00000403433 STIM1Q13586 685 aa20.14■□□□□ 0.81
CHTOP-205ENST00000403433 KMT5BQ4FZB7 885 aa20.14■□□□□ 0.81
CHTOP-205ENST00000403433 SYT10Q6XYQ8 523 aa20.14■□□□□ 0.81
CHTOP-205ENST00000403433 POTEDQ86YR6 584 aa20.14■□□□□ 0.81
CHTOP-205ENST00000403433 ADGRF4Q8IZF3 695 aa20.14■□□□□ 0.81
CHTOP-205ENST00000403433 CCDC47Q96A33 483 aaKnown RBP20.14■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms