RNA–Protein interactions for RNA: ENST00000402555.2

HMGB1P20-201, Transcript of high mobility group box 1 pseudogene 20, humanhuman

BASIC

Gene HMGB1P20, Length 677 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P20-201ENST00000402555 HAND2P61296 217 aa6.85□□□□□ -1.31
HMGB1P20-201ENST00000402555 CCNA1P78396 465 aa6.85□□□□□ -1.31
HMGB1P20-201ENST00000402555 TFAP4Q01664 338 aa6.85□□□□□ -1.31
HMGB1P20-201ENST00000402555 KCNC4Q03721 635 aa6.85□□□□□ -1.31
HMGB1P20-201ENST00000402555 PDE4BQ07343 736 aa6.85□□□□□ -1.31
HMGB1P20-201ENST00000402555 KLRC3Q07444 240 aa6.85□□□□□ -1.31
HMGB1P20-201ENST00000402555 TMEM132BQ14DG7 1078 aa6.85□□□□□ -1.31
HMGB1P20-201ENST00000402555 CWC27Q6UX04 472 aaKnown RBP6.85□□□□□ -1.31
HMGB1P20-201ENST00000402555 RASGRP2Q7LDG7 609 aa6.85□□□□□ -1.31
HMGB1P20-201ENST00000402555 NEDD1Q8NHV4 660 aa6.85□□□□□ -1.31
HMGB1P20-201ENST00000402555 U2AF1L4Q8WU68 220 aaKnown RBP6.85□□□□□ -1.31
HMGB1P20-201ENST00000402555 SOCS4Q8WXH5 440 aa6.85□□□□□ -1.31
HMGB1P20-201ENST00000402555 USP6NLQ92738 828 aa6.85□□□□□ -1.31
HMGB1P20-201ENST00000402555 SPATC1LQ9H0A9 340 aa6.85□□□□□ -1.31
HMGB1P20-201ENST00000402555 XRN2Q9H0D6 950 aaKnown RBP eCLIP6.85□□□□□ -1.31
HMGB1P20-201ENST00000402555 OSBPL3Q9H4L5 887 aa6.85□□□□□ -1.31
HMGB1P20-201ENST00000402555 ZNF287Q9HBT7 754 aa6.85□□□□□ -1.31
HMGB1P20-201ENST00000402555 GOPCQ9HD26 462 aa6.85□□□□□ -1.31
HMGB1P20-201ENST00000402555 TOMM22Q9NS69 142 aa6.85□□□□□ -1.31
HMGB1P20-201ENST00000402555 DIAPH3Q9NSV4 1193 aa6.85□□□□□ -1.31
HMGB1P20-201ENST00000402555 MTMR4Q9NYA4 1195 aa6.85□□□□□ -1.31
HMGB1P20-201ENST00000402555 HOXC10Q9NYD6 342 aa6.85□□□□□ -1.31
HMGB1P20-201ENST00000402555 FLRT1Q9NZU1 646 aa6.85□□□□□ -1.31
HMGB1P20-201ENST00000402555 NYAP2Q9P242 653 aa6.85□□□□□ -1.31
HMGB1P20-201ENST00000402555 RANBP6O60518 1105 aaKnown RBP6.84□□□□□ -1.31
HMGB1P20-201ENST00000402555 SLC3A2P08195 630 aaKnown RBP6.84□□□□□ -1.31
HMGB1P20-201ENST00000402555 GSPT1P15170 499 aaKnown RBP6.84□□□□□ -1.31
HMGB1P20-201ENST00000402555 ZKSCAN1P17029 563 aaPredicted RBP6.84□□□□□ -1.31
HMGB1P20-201ENST00000402555 ERCC3P19447 782 aa6.84□□□□□ -1.31
HMGB1P20-201ENST00000402555 GJA8P48165 433 aa6.84□□□□□ -1.31
HMGB1P20-201ENST00000402555 SLC4A3P48751 1232 aa6.84□□□□□ -1.31
HMGB1P20-201ENST00000402555 CACNB2Q08289 660 aaPredicted RBP6.84□□□□□ -1.31
HMGB1P20-201ENST00000402555 MAP2K5Q13163 448 aa6.84□□□□□ -1.31
HMGB1P20-201ENST00000402555 ALX1Q15699 326 aa6.84□□□□□ -1.31
HMGB1P20-201ENST00000402555 RRP12Q5JTH9 1297 aaKnown RBP6.84□□□□□ -1.31
HMGB1P20-201ENST00000402555 TTC22Q5TAA0 569 aa6.84□□□□□ -1.31
HMGB1P20-201ENST00000402555 SKAP1Q86WV1 359 aa6.84□□□□□ -1.31
HMGB1P20-201ENST00000402555 NCAPG2Q86XI2 1143 aa6.84□□□□□ -1.31
HMGB1P20-201ENST00000402555 TBC1D10CQ8IV04 446 aa6.84□□□□□ -1.31
HMGB1P20-201ENST00000402555 NPLOC4Q8TAT6 608 aa6.84□□□□□ -1.31
HMGB1P20-201ENST00000402555 NKX2-3Q8TAU0 364 aa6.84□□□□□ -1.31
HMGB1P20-201ENST00000402555 KCNV2Q8TDN2 545 aa6.84□□□□□ -1.31
HMGB1P20-201ENST00000402555 APBA2Q99767 749 aa6.84□□□□□ -1.31
HMGB1P20-201ENST00000402555 IL25Q9H293 177 aa6.84□□□□□ -1.31
HMGB1P20-201ENST00000402555 PAK6Q9NQU5 681 aaPredicted RBP6.84□□□□□ -1.31
HMGB1P20-201ENST00000402555 IL17RBQ9NRM6 502 aa6.84□□□□□ -1.31
HMGB1P20-201ENST00000402555 PPP1R9AQ9ULJ8 1098 aa6.84□□□□□ -1.31
HMGB1P20-201ENST00000402555 ISY1Q9ULR0 285 aaKnown RBP6.84□□□□□ -1.31
HMGB1P20-201ENST00000402555 MTMR7Q9Y216 660 aa6.84□□□□□ -1.31
HMGB1P20-201ENST00000402555 IVNS1ABPQ9Y6Y0 642 aa6.84□□□□□ -1.31
HMGB1P20-201ENST00000402555 PLIN4Q96Q06 1357 aa6.83□□□□□ -1.32
HMGB1P20-201ENST00000402555 SLC15A5A6NIM6 579 aa6.83□□□□□ -1.32
HMGB1P20-201ENST00000402555 TSPY2A6NKD2 308 aa6.83□□□□□ -1.32
HMGB1P20-201ENST00000402555 VWA5AO00534 786 aa6.83□□□□□ -1.32
HMGB1P20-201ENST00000402555 ORC4O43929 436 aa6.83□□□□□ -1.32
HMGB1P20-201ENST00000402555 COBLO75128 1261 aa6.83□□□□□ -1.32
HMGB1P20-201ENST00000402555 FARP2O94887 1054 aaPredicted RBP6.83□□□□□ -1.32
HMGB1P20-201ENST00000402555 SGPL1O95470 568 aa6.83□□□□□ -1.32
HMGB1P20-201ENST00000402555 TTLL1O95922 423 aa6.83□□□□□ -1.32
HMGB1P20-201ENST00000402555 TFRCP02786 760 aaKnown RBP6.83□□□□□ -1.32
HMGB1P20-201ENST00000402555 XRCC5P13010 732 aaKnown RBP6.83□□□□□ -1.32
HMGB1P20-201ENST00000402555 ADORA2AP29274 412 aa6.83□□□□□ -1.32
HMGB1P20-201ENST00000402555 CCND3P30281 292 aaPredicted RBP6.83□□□□□ -1.32
HMGB1P20-201ENST00000402555 CYP2C19P33261 490 aa6.83□□□□□ -1.32
HMGB1P20-201ENST00000402555 GRB14Q14449 540 aa6.83□□□□□ -1.32
HMGB1P20-201ENST00000402555 MAP3K21Q5TCX8 1036 aa6.83□□□□□ -1.32
HMGB1P20-201ENST00000402555 SLFN13Q68D06 897 aa6.83□□□□□ -1.32
HMGB1P20-201ENST00000402555 NUDT18Q6ZVK8 323 aa6.83□□□□□ -1.32
HMGB1P20-201ENST00000402555 MB21D1Q8N884 522 aa6.83□□□□□ -1.32
HMGB1P20-201ENST00000402555 REPS2Q8NFH8 660 aa6.83□□□□□ -1.32
HMGB1P20-201ENST00000402555 DIS3LQ8TF46 1054 aaKnown RBP6.83□□□□□ -1.32
HMGB1P20-201ENST00000402555 MKL1Q969V6 931 aa6.83□□□□□ -1.32
HMGB1P20-201ENST00000402555 KIFC2Q96AC6 838 aa6.83□□□□□ -1.32
HMGB1P20-201ENST00000402555 SLF1Q9BQI6 1058 aa6.83□□□□□ -1.32
HMGB1P20-201ENST00000402555 HMX1Q9NP08 348 aaPredicted RBP6.83□□□□□ -1.32
HMGB1P20-201ENST00000402555 ANAPC4Q9UJX5 808 aa6.83□□□□□ -1.32
HMGB1P20-201ENST00000402555 ADAMTS5Q9UNA0 930 aa6.83□□□□□ -1.32
HMGB1P20-201ENST00000402555 STX8Q9UNK0 236 aa6.83□□□□□ -1.32
HMGB1P20-201ENST00000402555 ZNFX1Q9P2E3 1918 aaKnown RBP6.83□□□□□ -1.32
HMGB1P20-201ENST00000402555 NEDD4P46934 1319 aa6.82□□□□□ -1.32
HMGB1P20-201ENST00000402555 RPTORQ8N122 1335 aa6.82□□□□□ -1.32
HMGB1P20-201ENST00000402555 TMEM232C9JQI7 657 aa6.82□□□□□ -1.32
HMGB1P20-201ENST00000402555 PGK2P07205 417 aa6.82□□□□□ -1.32
HMGB1P20-201ENST00000402555 FGRP09769 529 aa6.82□□□□□ -1.32
HMGB1P20-201ENST00000402555 MCCP23508 829 aa6.82□□□□□ -1.32
HMGB1P20-201ENST00000402555 STAT3P40763 770 aa6.82□□□□□ -1.32
HMGB1P20-201ENST00000402555 MLLT3P42568 568 aaPredicted RBP6.82□□□□□ -1.32
HMGB1P20-201ENST00000402555 SNAP25P60880 206 aa6.82□□□□□ -1.32
HMGB1P20-201ENST00000402555 PRPF38BQ5VTL8 546 aaKnown RBP6.82□□□□□ -1.32
HMGB1P20-201ENST00000402555 SNRNP48Q6IEG0 339 aaKnown RBP6.82□□□□□ -1.32
HMGB1P20-201ENST00000402555 KCTD1Q719H9 257 aa6.82□□□□□ -1.32
HMGB1P20-201ENST00000402555 UBE2Q1Q7Z7E8 422 aa6.82□□□□□ -1.32
HMGB1P20-201ENST00000402555 DPP9Q86TI2 863 aa6.82□□□□□ -1.32
HMGB1P20-201ENST00000402555 RIOX2Q8IUF8 465 aa6.82□□□□□ -1.32
HMGB1P20-201ENST00000402555 CPXCR1Q8N123 301 aa6.82□□□□□ -1.32
HMGB1P20-201ENST00000402555 GMCL1P1Q8NEA9 526 aa6.82□□□□□ -1.32
HMGB1P20-201ENST00000402555 SHCBP1Q8NEM2 672 aa6.82□□□□□ -1.32
HMGB1P20-201ENST00000402555 TRPV1Q8NER1 839 aa6.82□□□□□ -1.32
HMGB1P20-201ENST00000402555 MROH8Q9H579 483 aa6.82□□□□□ -1.32
HMGB1P20-201ENST00000402555 RAVER2Q9HCJ3 691 aaKnown RBP6.82□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 66.8 ms