RNA–Protein interactions for RNA: ENST00000391813.5

SHANK1-203, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

TSL 1 (best) BASIC

Gene SHANK1, Length 4,785 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-203ENST00000391813 CEP120Q8N960 986 aa21.67■■□□□ 1.06
SHANK1-203ENST00000391813 EMBQ6PCB8 327 aa21.67■■□□□ 1.06
SHANK1-203ENST00000391813 NSUN7Q8NE18 718 aaKnown RBP21.67■■□□□ 1.06
SHANK1-203ENST00000391813 BCS1LQ9Y276 419 aa21.67■■□□□ 1.06
SHANK1-203ENST00000391813 ARHGEF40Q8TER5 1519 aa21.67■■□□□ 1.06
SHANK1-203ENST00000391813 PPP2R5AQ15172 486 aa21.67■■□□□ 1.06
SHANK1-203ENST00000391813 CCDC14Q49A88 953 aa21.67■■□□□ 1.06
SHANK1-203ENST00000391813 LGSNQ5TDP6 509 aa21.67■■□□□ 1.06
SHANK1-203ENST00000391813 DPY19L2Q6NUT2 758 aa21.67■■□□□ 1.06
SHANK1-203ENST00000391813 TTLL7Q6ZT98 887 aa21.67■■□□□ 1.06
SHANK1-203ENST00000391813 CABP7Q86V35 215 aa21.67■■□□□ 1.06
SHANK1-203ENST00000391813 RUNDC3BQ96NL0 473 aa21.67■■□□□ 1.06
SHANK1-203ENST00000391813 STK24Q9Y6E0 443 aa21.67■■□□□ 1.06
SHANK1-203ENST00000391813 I3L4J1 428 aa21.66■■□□□ 1.06
SHANK1-203ENST00000391813 PARP1P09874 1014 aaKnown RBP21.66■■□□□ 1.06
SHANK1-203ENST00000391813 PSMC4P43686 418 aa21.66■■□□□ 1.06
SHANK1-203ENST00000391813 E2F5Q15329 346 aa21.66■■□□□ 1.06
SHANK1-203ENST00000391813 RASIP1Q5U651 963 aa21.66■■□□□ 1.06
SHANK1-203ENST00000391813 ANKRD42Q8N9B4 389 aa21.66■■□□□ 1.06
SHANK1-203ENST00000391813 MYL10Q9BUA6 226 aa21.66■■□□□ 1.06
SHANK1-203ENST00000391813 GLT8D2Q9H1C3 349 aa21.66■■□□□ 1.06
SHANK1-203ENST00000391813 SMIM24O75264 130 aa21.66■■□□□ 1.06
SHANK1-203ENST00000391813 EEF1GP26641 437 aaKnown RBP21.66■■□□□ 1.06
SHANK1-203ENST00000391813 CNOT10Q9H9A5 744 aaKnown RBP21.66■■□□□ 1.06
SHANK1-203ENST00000391813 INTS9Q9NV88 658 aaKnown RBP21.66■■□□□ 1.06
SHANK1-203ENST00000391813 RPSAP08865 295 aaKnown RBP21.66■■□□□ 1.06
SHANK1-203ENST00000391813 UAP1Q16222 522 aaPredicted RBP21.66■■□□□ 1.06
SHANK1-203ENST00000391813 HERC4Q5GLZ8 1057 aaPredicted RBP21.66■■□□□ 1.06
SHANK1-203ENST00000391813 PTCH1Q13635 1447 aa21.66■■□□□ 1.06
SHANK1-203ENST00000391813 IRX5P78411 483 aaPredicted RBP21.66■■□□□ 1.06
SHANK1-203ENST00000391813 CCHCR1Q8TD31 782 aa21.65■■□□□ 1.06
SHANK1-203ENST00000391813 PICK1Q9NRD5 415 aa21.65■■□□□ 1.06
SHANK1-203ENST00000391813 PTPRMP28827 1452 aa21.65■■□□□ 1.06
SHANK1-203ENST00000391813 FAM169AQ9Y6X4 670 aa21.65■■□□□ 1.06
SHANK1-203ENST00000391813 RESTQ13127 1097 aa21.65■■□□□ 1.06
SHANK1-203ENST00000391813 NBPF9Q3BBW0 867 aa21.65■■□□□ 1.06
SHANK1-203ENST00000391813 TCP11Q8WWU5 503 aa21.65■■□□□ 1.06
SHANK1-203ENST00000391813 ZNF594Q96JF6 807 aaPredicted RBP21.65■■□□□ 1.06
SHANK1-203ENST00000391813 TULP4Q9NRJ4 1543 aa21.65■■□□□ 1.06
SHANK1-203ENST00000391813 SPHKAPQ2M3C7 1700 aa21.64■■□□□ 1.06
SHANK1-203ENST00000391813 ERVV-1B6SEH8 477 aa21.64■■□□□ 1.06
SHANK1-203ENST00000391813 HSPD1P10809 573 aaKnown RBP21.64■■□□□ 1.06
SHANK1-203ENST00000391813 ZSCAN20P17040 1043 aaPredicted RBP21.64■■□□□ 1.06
SHANK1-203ENST00000391813 GUCY2CP25092 1073 aa21.64■■□□□ 1.06
SHANK1-203ENST00000391813 HSPA1LP34931 641 aa21.64■■□□□ 1.06
SHANK1-203ENST00000391813 RBL2Q08999 1139 aa21.64■■□□□ 1.06
SHANK1-203ENST00000391813 AKNAD1Q5T1N1 836 aa21.64■■□□□ 1.06
SHANK1-203ENST00000391813 TTC19Q6DKK2 380 aaPredicted RBP21.64■■□□□ 1.06
SHANK1-203ENST00000391813 VCX3AQ9NNX9 186 aa21.64■■□□□ 1.06
SHANK1-203ENST00000391813 ZBTB1Q9Y2K1 713 aa21.64■■□□□ 1.06
SHANK1-203ENST00000391813 ERCC3P19447 782 aa21.64■■□□□ 1.06
SHANK1-203ENST00000391813 TNFAIP1Q13829 316 aa21.64■■□□□ 1.06
SHANK1-203ENST00000391813 MGARPQ8TDB4 240 aa21.64■■□□□ 1.06
SHANK1-203ENST00000391813 ANKRD7Q92527 254 aa21.64■■□□□ 1.06
SHANK1-203ENST00000391813 CCNT1O60563 726 aaKnown RBP21.64■■□□□ 1.05
SHANK1-203ENST00000391813 TXKP42681 527 aa21.64■■□□□ 1.05
SHANK1-203ENST00000391813 PPARDQ03181 441 aa21.64■■□□□ 1.05
SHANK1-203ENST00000391813 NNTQ13423 1086 aa21.64■■□□□ 1.05
SHANK1-203ENST00000391813 DLGAP5Q15398 846 aa21.64■■□□□ 1.05
SHANK1-203ENST00000391813 TRMT1LQ7Z2T5 733 aaKnown RBP21.64■■□□□ 1.05
SHANK1-203ENST00000391813 HAUS7Q99871 368 aa21.64■■□□□ 1.05
SHANK1-203ENST00000391813 TXNDC9O14530 226 aa21.64■■□□□ 1.05
SHANK1-203ENST00000391813 ENC1O14682 589 aa21.64■■□□□ 1.05
SHANK1-203ENST00000391813 TRAF3IP1Q8TDR0 691 aaPredicted RBP21.64■■□□□ 1.05
SHANK1-203ENST00000391813 SNX29Q8TEQ0 813 aa21.64■■□□□ 1.05
SHANK1-203ENST00000391813 CLIC6Q96NY7 704 aa21.64■■□□□ 1.05
SHANK1-203ENST00000391813 KIF1CO43896 1103 aaKnown RBP21.63■■□□□ 1.05
SHANK1-203ENST00000391813 LIN9Q5TKA1 542 aa21.63■■□□□ 1.05
SHANK1-203ENST00000391813 SIRT2Q8IXJ6 389 aa21.63■■□□□ 1.05
SHANK1-203ENST00000391813 COMMD10Q9Y6G5 202 aa21.63■■□□□ 1.05
SHANK1-203ENST00000391813 BCRP11274 1271 aa21.63■■□□□ 1.05
SHANK1-203ENST00000391813 ADD1P35611 737 aaKnown RBP21.63■■□□□ 1.05
SHANK1-203ENST00000391813 WHAMMQ8TF30 809 aa21.63■■□□□ 1.05
SHANK1-203ENST00000391813 LZTS2Q9BRK4 669 aa21.63■■□□□ 1.05
SHANK1-203ENST00000391813 HEXIM1O94992 359 aaKnown RBP21.63■■□□□ 1.05
SHANK1-203ENST00000391813 CYP2C19P33261 490 aa21.63■■□□□ 1.05
SHANK1-203ENST00000391813 STAT1P42224 750 aa21.63■■□□□ 1.05
SHANK1-203ENST00000391813 TPD52P55327 224 aaPredicted RBP21.63■■□□□ 1.05
SHANK1-203ENST00000391813 SF3A3Q12874 501 aaKnown RBP eCLIP21.63■■□□□ 1.05
SHANK1-203ENST00000391813 CARMIL3Q8ND23 1372 aa21.63■■□□□ 1.05
SHANK1-203ENST00000391813 HMGB1P1B2RPK0 211 aaPredicted RBP21.63■■□□□ 1.05
SHANK1-203ENST00000391813 NR1D1P20393 614 aa21.63■■□□□ 1.05
SHANK1-203ENST00000391813 NCAPD2Q15021 1401 aa21.62■■□□□ 1.05
SHANK1-203ENST00000391813 CCDC24Q8N4L8 307 aa21.62■■□□□ 1.05
SHANK1-203ENST00000391813 KLHL29Q96CT2 875 aa21.62■■□□□ 1.05
SHANK1-203ENST00000391813 ARMT1Q9H993 441 aa21.62■■□□□ 1.05
SHANK1-203ENST00000391813 ARHGEF10LQ9HCE6 1279 aa21.62■■□□□ 1.05
SHANK1-203ENST00000391813 VPS54Q9P1Q0 977 aa21.62■■□□□ 1.05
SHANK1-203ENST00000391813 JAG2Q9Y219 1238 aa21.62■■□□□ 1.05
SHANK1-203ENST00000391813 H2AFZP0C0S5 128 aa21.62■■□□□ 1.05
SHANK1-203ENST00000391813 H2AFVQ71UI9 128 aa21.62■■□□□ 1.05
SHANK1-203ENST00000391813 EDC3Q96F86 508 aaKnown RBP21.62■■□□□ 1.05
SHANK1-203ENST00000391813 HEG1Q9ULI3 1381 aa21.62■■□□□ 1.05
SHANK1-203ENST00000391813 BTBD18B2RXH4 712 aa21.61■■□□□ 1.05
SHANK1-203ENST00000391813 CC2D2BQ6DHV5 1058 aa21.61■■□□□ 1.05
SHANK1-203ENST00000391813 ZNF654Q8IZM8 581 aa21.61■■□□□ 1.05
SHANK1-203ENST00000391813 PLEKHA4Q9H4M7 779 aa21.61■■□□□ 1.05
SHANK1-203ENST00000391813 HSP90AA5PQ58FG0 334 aa21.61■■□□□ 1.05
SHANK1-203ENST00000391813 RPUSD2Q8IZ73 545 aaKnown RBP21.61■■□□□ 1.05
SHANK1-203ENST00000391813 MAGEF1Q9HAY2 307 aa21.61■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms