RNA–Protein interactions for RNA: ENST00000390466.1

TRAV39-201, Transcript of T cell receptor alpha variable 39, humanhuman

APPRIS P1 BASIC

Gene TRAV39, Length 331 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV39-201ENST00000390466 INPP4AQ96PE3 977 aaPredicted RBP3.87□□□□□ -1.79
TRAV39-201ENST00000390466 ZIM3Q96PE6 472 aa3.87□□□□□ -1.79
TRAV39-201ENST00000390466 GSDMAQ96QA5 445 aa3.87□□□□□ -1.79
TRAV39-201ENST00000390466 TLR10Q9BXR5 811 aa3.87□□□□□ -1.79
TRAV39-201ENST00000390466 PUS3Q9BZE2 481 aaKnown RBP3.87□□□□□ -1.79
TRAV39-201ENST00000390466 CSRNP2Q9H175 543 aa3.87□□□□□ -1.79
TRAV39-201ENST00000390466 EPN3Q9H201 632 aa3.87□□□□□ -1.79
TRAV39-201ENST00000390466 SLC52A2Q9HAB3 445 aa3.87□□□□□ -1.79
TRAV39-201ENST00000390466 ATP6V0A4Q9HBG4 840 aa3.87□□□□□ -1.79
TRAV39-201ENST00000390466 SLC40A1Q9NP59 571 aa3.87□□□□□ -1.79
TRAV39-201ENST00000390466 RWDD2AQ9UIY3 292 aa3.87□□□□□ -1.79
TRAV39-201ENST00000390466 SALL4Q9UJQ4 1053 aa3.87□□□□□ -1.79
TRAV39-201ENST00000390466 TPX2Q9ULW0 747 aaKnown RBP3.87□□□□□ -1.79
TRAV39-201ENST00000390466 CAPN11Q9UMQ6 739 aa3.87□□□□□ -1.79
TRAV39-201ENST00000390466 SNX12Q9UMY4 172 aa3.87□□□□□ -1.79
TRAV39-201ENST00000390466 CTNND2Q9UQB3 1225 aa3.87□□□□□ -1.79
TRAV39-201ENST00000390466 AMOTL2Q9Y2J4 779 aa3.87□□□□□ -1.79
TRAV39-201ENST00000390466 SAMM50Q9Y512 469 aa3.87□□□□□ -1.79
TRAV39-201ENST00000390466 SAR1BQ9Y6B6 198 aa3.87□□□□□ -1.79
TRAV39-201ENST00000390466 CAPN6Q9Y6Q1 641 aa3.87□□□□□ -1.79
TRAV39-201ENST00000390466 GREB1LQ9C091 1923 aaPredicted RBP3.87□□□□□ -1.79
TRAV39-201ENST00000390466 MYH9P35579 1960 aaKnown RBP3.86□□□□□ -1.79
TRAV39-201ENST00000390466 A6NNZ2 444 aa3.86□□□□□ -1.79
TRAV39-201ENST00000390466 GOLGA8AA7E2F4 631 aa3.86□□□□□ -1.79
TRAV39-201ENST00000390466 TMCO5BA8MYB1 307 aa3.86□□□□□ -1.79
TRAV39-201ENST00000390466 KCNJ18B7U540 433 aa3.86□□□□□ -1.79
TRAV39-201ENST00000390466 F8W031 263 aaPredicted RBP3.86□□□□□ -1.79
TRAV39-201ENST00000390466 DNM1LO00429 736 aa3.86□□□□□ -1.79
TRAV39-201ENST00000390466 ADAMTS3O15072 1205 aa3.86□□□□□ -1.79
TRAV39-201ENST00000390466 ZBTB43O43298 467 aa3.86□□□□□ -1.79
TRAV39-201ENST00000390466 GTPBP6O43824 516 aaPredicted RBP3.86□□□□□ -1.79
TRAV39-201ENST00000390466 MGRN1O60291 552 aa3.86□□□□□ -1.79
TRAV39-201ENST00000390466 PPP1R37O75864 691 aa3.86□□□□□ -1.79
TRAV39-201ENST00000390466 DNAJC8O75937 253 aaPredicted RBP3.86□□□□□ -1.79
TRAV39-201ENST00000390466 CDKL5O76039 1030 aa3.86□□□□□ -1.79
TRAV39-201ENST00000390466 IFIT1P09914 478 aaKnown RBP3.86□□□□□ -1.79
TRAV39-201ENST00000390466 FAM153BP0C7A2 387 aa3.86□□□□□ -1.79
TRAV39-201ENST00000390466 PDHBP11177 359 aa3.86□□□□□ -1.79
TRAV39-201ENST00000390466 GCFC2P16383 781 aaKnown RBP3.86□□□□□ -1.79
TRAV39-201ENST00000390466 HSPA9P38646 679 aaKnown RBP3.86□□□□□ -1.79
TRAV39-201ENST00000390466 CCT6AP40227 531 aaKnown RBP3.86□□□□□ -1.79
TRAV39-201ENST00000390466 USP8P40818 1118 aa3.86□□□□□ -1.79
TRAV39-201ENST00000390466 MCAMP43121 646 aa3.86□□□□□ -1.79
TRAV39-201ENST00000390466 ZAP70P43403 619 aa3.86□□□□□ -1.79
TRAV39-201ENST00000390466 HDGFP51858 240 aaKnown RBP3.86□□□□□ -1.79
TRAV39-201ENST00000390466 VAV2P52735 878 aa3.86□□□□□ -1.79
TRAV39-201ENST00000390466 EPHB4P54760 987 aa3.86□□□□□ -1.79
TRAV39-201ENST00000390466 ATP2C1P98194 919 aaPredicted RBP3.86□□□□□ -1.79
TRAV39-201ENST00000390466 AKAP17AQ02040 695 aaKnown RBP3.86□□□□□ -1.79
TRAV39-201ENST00000390466 SPAG1Q07617 926 aa3.86□□□□□ -1.79
TRAV39-201ENST00000390466 AIMP1Q12904 312 aaKnown RBP3.86□□□□□ -1.79
TRAV39-201ENST00000390466 SLC39A6Q13433 755 aa3.86□□□□□ -1.79
TRAV39-201ENST00000390466 TCIRG1Q13488 830 aa3.86□□□□□ -1.79
TRAV39-201ENST00000390466 KCNJ12Q14500 433 aa3.86□□□□□ -1.79
TRAV39-201ENST00000390466 TTF1Q15361 905 aaPredicted RBP3.86□□□□□ -1.79
TRAV39-201ENST00000390466 SEC23AQ15436 765 aa3.86□□□□□ -1.79
TRAV39-201ENST00000390466 UAP1Q16222 522 aaPredicted RBP3.86□□□□□ -1.79
TRAV39-201ENST00000390466 QPCTQ16769 361 aa3.86□□□□□ -1.79
TRAV39-201ENST00000390466 WASHC4Q2M389 1173 aa3.86□□□□□ -1.79
TRAV39-201ENST00000390466 ASTE1Q2TB18 679 aaPredicted RBP3.86□□□□□ -1.79
TRAV39-201ENST00000390466 TUBB8Q3ZCM7 444 aa3.86□□□□□ -1.79
TRAV39-201ENST00000390466 FAM153CQ494X1 144 aa3.86□□□□□ -1.79
TRAV39-201ENST00000390466 HSP90AB3PQ58FF7 597 aa3.86□□□□□ -1.79
TRAV39-201ENST00000390466 ANKRD20A8PQ5CZ79 823 aa3.86□□□□□ -1.79
TRAV39-201ENST00000390466 RILPL1Q5EBL4 403 aa3.86□□□□□ -1.79
TRAV39-201ENST00000390466 TCP11X2Q5H9J9 407 aa3.86□□□□□ -1.79
TRAV39-201ENST00000390466 FIGNQ5HY92 759 aa3.86□□□□□ -1.79
TRAV39-201ENST00000390466 MIIPQ5JXC2 388 aa3.86□□□□□ -1.79
TRAV39-201ENST00000390466 TTLL7Q6ZT98 887 aa3.86□□□□□ -1.79
TRAV39-201ENST00000390466 ANKRD13DQ6ZTN6 518 aa3.86□□□□□ -1.79
TRAV39-201ENST00000390466 B4GALNT4Q76KP1 1039 aa3.86□□□□□ -1.79
TRAV39-201ENST00000390466 RIC3Q7Z5B4 369 aa3.86□□□□□ -1.79
TRAV39-201ENST00000390466 NLRP14Q86W24 1093 aa3.86□□□□□ -1.79
TRAV39-201ENST00000390466 PPFIBP1Q86W92 1011 aa3.86□□□□□ -1.79
TRAV39-201ENST00000390466 MICU3Q86XE3 530 aa3.86□□□□□ -1.79
TRAV39-201ENST00000390466 ZSCAN29Q8IWY8 852 aaPredicted RBP3.86□□□□□ -1.79
TRAV39-201ENST00000390466 TEX11Q8IYF3 940 aa3.86□□□□□ -1.79
TRAV39-201ENST00000390466 FUKQ8N0W3 1084 aa3.86□□□□□ -1.79
TRAV39-201ENST00000390466 MB21D1Q8N884 522 aa3.86□□□□□ -1.79
TRAV39-201ENST00000390466 C4orf32Q8N8J7 132 aa3.86□□□□□ -1.79
TRAV39-201ENST00000390466 C3orf20Q8ND61 904 aa3.86□□□□□ -1.79
TRAV39-201ENST00000390466 SPATA4Q8NEY3 305 aa3.86□□□□□ -1.79
TRAV39-201ENST00000390466 OR8K1Q8NGG5 319 aa3.86□□□□□ -1.79
TRAV39-201ENST00000390466 PLBD2Q8NHP8 589 aa3.86□□□□□ -1.79
TRAV39-201ENST00000390466 CPLX3Q8WVH0 158 aa3.86□□□□□ -1.79
TRAV39-201ENST00000390466 SYMPKQ92797 1274 aaKnown RBP3.86□□□□□ -1.79
TRAV39-201ENST00000390466 CYFIP2Q96F07 1278 aa3.86□□□□□ -1.79
TRAV39-201ENST00000390466 EPSTI1Q96J88 318 aa3.86□□□□□ -1.79
TRAV39-201ENST00000390466 ZNF594Q96JF6 807 aaPredicted RBP3.86□□□□□ -1.79
TRAV39-201ENST00000390466 ERGIC2Q96RQ1 377 aa3.86□□□□□ -1.79
TRAV39-201ENST00000390466 CTAGE1Q96RT6 745 aa3.86□□□□□ -1.79
TRAV39-201ENST00000390466 DUSP9Q99956 384 aaKnown RBP3.86□□□□□ -1.79
TRAV39-201ENST00000390466 JPH2Q9BR39 696 aaPredicted RBP3.86□□□□□ -1.79
TRAV39-201ENST00000390466 CRACR2AQ9BSW2 395 aa3.86□□□□□ -1.79
TRAV39-201ENST00000390466 MTA3Q9BTC8 594 aa3.86□□□□□ -1.79
TRAV39-201ENST00000390466 LRRC1Q9BTT6 524 aa3.86□□□□□ -1.79
TRAV39-201ENST00000390466 MYL10Q9BUA6 226 aa3.86□□□□□ -1.79
TRAV39-201ENST00000390466 ISCA1Q9BUE6 129 aa3.86□□□□□ -1.79
TRAV39-201ENST00000390466 PLA2G12BQ9BX93 195 aa3.86□□□□□ -1.79
TRAV39-201ENST00000390466 NDST4Q9H3R1 872 aa3.86□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms