RNA–Protein interactions for RNA: ENST00000380815.4

GMDS-202, Transcript of GDP-mannose 4,6-dehydratase, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene GMDS, Length 1,752 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GMDS-202ENST00000380815 RIC8AQ9NPQ8 531 aa24.47■■□□□ 1.51
GMDS-202ENST00000380815 HOOK1Q9UJC3 728 aaKnown RBP24.47■■□□□ 1.51
GMDS-202ENST00000380815 TMX2Q9Y320 296 aa24.47■■□□□ 1.51
GMDS-202ENST00000380815 VWA3AA6NCI4 1184 aa24.46■■□□□ 1.51
GMDS-202ENST00000380815 LAD1O00515 517 aa24.46■■□□□ 1.51
GMDS-202ENST00000380815 POLR2DO15514 142 aaKnown RBP24.46■■□□□ 1.51
GMDS-202ENST00000380815 CAP2P40123 477 aa24.46■■□□□ 1.51
GMDS-202ENST00000380815 ZRSR1Q15695 479 aaKnown RBP24.46■■□□□ 1.51
GMDS-202ENST00000380815 USP49Q70CQ1 688 aa24.46■■□□□ 1.51
GMDS-202ENST00000380815 USP25Q9UHP3 1055 aa24.46■■□□□ 1.51
GMDS-202ENST00000380815 TUBE1Q9UJT0 475 aa24.46■■□□□ 1.51
GMDS-202ENST00000380815 BMP3P12645 472 aa24.45■■□□□ 1.5
GMDS-202ENST00000380815 LUZP1Q86V48 1076 aa24.45■■□□□ 1.5
GMDS-202ENST00000380815 SYMPKQ92797 1274 aaKnown RBP24.45■■□□□ 1.5
GMDS-202ENST00000380815 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP24.44■■□□□ 1.5
GMDS-202ENST00000380815 ORC2Q13416 577 aaPredicted RBP24.44■■□□□ 1.5
GMDS-202ENST00000380815 QRICH1Q2TAL8 776 aa24.44■■□□□ 1.5
GMDS-202ENST00000380815 KANK3Q6NY19 840 aa24.44■■□□□ 1.5
GMDS-202ENST00000380815 BTNL9Q6UXG8 535 aa24.44■■□□□ 1.5
GMDS-202ENST00000380815 SAMD7Q7Z3H4 446 aa24.44■■□□□ 1.5
GMDS-202ENST00000380815 EPSTI1Q96J88 318 aa24.44■■□□□ 1.5
GMDS-202ENST00000380815 TEPSINQ96N21 525 aa24.44■■□□□ 1.5
GMDS-202ENST00000380815 BIN2Q9UBW5 565 aaPredicted RBP24.44■■□□□ 1.5
GMDS-202ENST00000380815 ZNF541Q9H0D2 1346 aa24.44■■□□□ 1.5
GMDS-202ENST00000380815 MDM2Q00987 491 aaPredicted RBP24.44■■□□□ 1.5
GMDS-202ENST00000380815 C11orf57Q6ZUT1 292 aaPredicted RBP24.44■■□□□ 1.5
GMDS-202ENST00000380815 NEK8Q86SG6 692 aa24.44■■□□□ 1.5
GMDS-202ENST00000380815 CEP57L1Q8IYX8 460 aa24.44■■□□□ 1.5
GMDS-202ENST00000380815 TRIM44Q96DX7 344 aaPredicted RBP24.44■■□□□ 1.5
GMDS-202ENST00000380815 NAT10Q9H0A0 1025 aaKnown RBP24.44■■□□□ 1.5
GMDS-202ENST00000380815 GLT8D2Q9H1C3 349 aa24.44■■□□□ 1.5
GMDS-202ENST00000380815 GOPCQ9HD26 462 aa24.44■■□□□ 1.5
GMDS-202ENST00000380815 LONP1P36776 959 aaKnown RBP24.43■■□□□ 1.5
GMDS-202ENST00000380815 ECE1P42892 770 aa24.43■■□□□ 1.5
GMDS-202ENST00000380815 MRPL12P52815 198 aaKnown RBP24.43■■□□□ 1.5
GMDS-202ENST00000380815 CDC37Q16543 378 aaPredicted RBP24.43■■□□□ 1.5
GMDS-202ENST00000380815 IL17AQ16552 155 aa24.43■■□□□ 1.5
GMDS-202ENST00000380815 JAKMIP3Q5VZ66 844 aa24.43■■□□□ 1.5
GMDS-202ENST00000380815 CUL5Q93034 780 aa24.43■■□□□ 1.5
GMDS-202ENST00000380815 NUP88Q99567 741 aaPredicted RBP24.43■■□□□ 1.5
GMDS-202ENST00000380815 TMEM232C9JQI7 657 aa24.42■■□□□ 1.5
GMDS-202ENST00000380815 ACTN4O43707 911 aaKnown RBP24.42■■□□□ 1.5
GMDS-202ENST00000380815 ASNSP08243 561 aa24.42■■□□□ 1.5
GMDS-202ENST00000380815 PRPHP41219 470 aa24.42■■□□□ 1.5
GMDS-202ENST00000380815 PNOCQ13519 176 aa24.42■■□□□ 1.5
GMDS-202ENST00000380815 IQCB1Q15051 598 aa24.42■■□□□ 1.5
GMDS-202ENST00000380815 KIF4BQ2VIQ3 1234 aa24.42■■□□□ 1.5
GMDS-202ENST00000380815 TBC1D10BQ4KMP7 808 aaPredicted RBP24.42■■□□□ 1.5
GMDS-202ENST00000380815 ACER1Q8TDN7 264 aa24.42■■□□□ 1.5
GMDS-202ENST00000380815 TBCKQ8TEA7 893 aa24.42■■□□□ 1.5
GMDS-202ENST00000380815 SERTAD1Q9UHV2 236 aa24.42■■□□□ 1.5
GMDS-202ENST00000380815 LMNB1P20700 586 aa24.42■■□□□ 1.5
GMDS-202ENST00000380815 CLK2P49760 499 aaKnown RBP24.42■■□□□ 1.5
GMDS-202ENST00000380815 NLRP12P59046 1061 aa24.42■■□□□ 1.5
GMDS-202ENST00000380815 SYDE2Q5VT97 1194 aa24.42■■□□□ 1.5
GMDS-202ENST00000380815 PDILTQ8N807 584 aa24.42■■□□□ 1.5
GMDS-202ENST00000380815 CCDC34Q96HJ3 373 aa24.42■■□□□ 1.5
GMDS-202ENST00000380815 PYM1Q9BRP8 204 aaKnown RBP24.42■■□□□ 1.5
GMDS-202ENST00000380815 SH2D4AQ9H788 454 aa24.42■■□□□ 1.5
GMDS-202ENST00000380815 TMEM260Q9NX78 707 aa24.42■■□□□ 1.5
GMDS-202ENST00000380815 LETM2Q2VYF4 491 aa24.41■■□□□ 1.5
GMDS-202ENST00000380815 ARHGAP27Q6ZUM4 889 aa24.41■■□□□ 1.5
GMDS-202ENST00000380815 PSTPIP2Q9H939 334 aa24.41■■□□□ 1.5
GMDS-202ENST00000380815 HACL1Q9UJ83 578 aa24.41■■□□□ 1.5
GMDS-202ENST00000380815 PCDHA1Q9Y5I3 950 aa24.41■■□□□ 1.5
GMDS-202ENST00000380815 PHF20L1A8MW92 1017 aa24.4■■□□□ 1.5
GMDS-202ENST00000380815 H7C1D1 291 aa24.4■■□□□ 1.5
GMDS-202ENST00000380815 CCNT1O60563 726 aaKnown RBP24.4■■□□□ 1.5
GMDS-202ENST00000380815 ADCY5O95622 1261 aa24.4■■□□□ 1.5
GMDS-202ENST00000380815 POSTNQ15063 836 aa24.4■■□□□ 1.5
GMDS-202ENST00000380815 DTHD1Q6ZMT9 781 aa24.4■■□□□ 1.5
GMDS-202ENST00000380815 BPIFA3Q9BQP9 254 aa24.4■■□□□ 1.5
GMDS-202ENST00000380815 TMEM60Q9H2L4 133 aa24.4■■□□□ 1.5
GMDS-202ENST00000380815 A0A087WWV3 80 aa24.39■■□□□ 1.5
GMDS-202ENST00000380815 A0A087X0B3 334 aa24.39■■□□□ 1.5
GMDS-202ENST00000380815 SLFN14P0C7P3 912 aa24.39■■□□□ 1.5
GMDS-202ENST00000380815 IKQ13123 557 aaPredicted RBP24.39■■□□□ 1.5
GMDS-202ENST00000380815 DPCR1Q3MIW9 517 aa24.39■■□□□ 1.5
GMDS-202ENST00000380815 SPICE1Q8N0Z3 855 aa24.39■■□□□ 1.5
GMDS-202ENST00000380815 AMNQ9BXJ7 453 aa24.39■■□□□ 1.5
GMDS-202ENST00000380815 FHDC1Q9C0D6 1143 aaPredicted RBP24.39■■□□□ 1.5
GMDS-202ENST00000380815 HS1BP3Q53T59 392 aa24.39■■□□□ 1.49
GMDS-202ENST00000380815 NT5DC1Q5TFE4 455 aa24.39■■□□□ 1.49
GMDS-202ENST00000380815 GPC2Q8N158 579 aa24.39■■□□□ 1.49
GMDS-202ENST00000380815 DEFB129Q9H1M3 183 aa24.39■■□□□ 1.49
GMDS-202ENST00000380815 VCPKMTQ9H867 229 aa24.39■■□□□ 1.49
GMDS-202ENST00000380815 GINM1Q9NU53 330 aa24.39■■□□□ 1.49
GMDS-202ENST00000380815 SCAF8Q9UPN6 1271 aaKnown RBP24.39■■□□□ 1.49
GMDS-202ENST00000380815 PCDHA5Q9Y5H7 936 aa24.39■■□□□ 1.49
GMDS-202ENST00000380815 BIN1O00499 593 aa24.38■■□□□ 1.49
GMDS-202ENST00000380815 NEMFO60524 1076 aa24.38■■□□□ 1.49
GMDS-202ENST00000380815 STAT2P52630 851 aa24.38■■□□□ 1.49
GMDS-202ENST00000380815 KIAA1755Q5JYT7 1200 aa24.38■■□□□ 1.49
GMDS-202ENST00000380815 DHX58Q96C10 678 aa24.38■■□□□ 1.49
GMDS-202ENST00000380815 ASTN2O75129 1339 aaPredicted RBP24.38■■□□□ 1.49
GMDS-202ENST00000380815 DICER1Q9UPY3 1922 aaKnown RBP24.37■■□□□ 1.49
GMDS-202ENST00000380815 GOLGA6L19H0YKK7 550 aa24.37■■□□□ 1.49
GMDS-202ENST00000380815 FOXN1O15353 648 aa24.37■■□□□ 1.49
GMDS-202ENST00000380815 AP5Z1O43299 807 aa24.37■■□□□ 1.49
GMDS-202ENST00000380815 DHX40Q8IX18 779 aaKnown RBP24.37■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 97 ms