RNA–Protein interactions for RNA: ENST00000378133.4

PCDHA1-201, Transcript of protocadherin alpha 1, humanhuman

BASIC

Gene PCDHA1, Length 2,726 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA1-201ENST00000378133 TAB2Q9NYJ8 693 aa18.63■□□□□ 0.57
PCDHA1-201ENST00000378133 ZNF652Q9Y2D9 606 aa18.63■□□□□ 0.57
PCDHA1-201ENST00000378133 MYH13Q9UKX3 1938 aa18.63■□□□□ 0.57
PCDHA1-201ENST00000378133 AARSP49588 968 aaKnown RBP eCLIP18.63■□□□□ 0.57
PCDHA1-201ENST00000378133 CYP26C1Q6V0L0 522 aa18.63■□□□□ 0.57
PCDHA1-201ENST00000378133 EP400NLQ6ZTU2 488 aa18.63■□□□□ 0.57
PCDHA1-201ENST00000378133 SLF1Q9BQI6 1058 aa18.63■□□□□ 0.57
PCDHA1-201ENST00000378133 ABHD10Q9NUJ1 306 aa18.63■□□□□ 0.57
PCDHA1-201ENST00000378133 LIMA1Q9UHB6 759 aaKnown RBP18.63■□□□□ 0.57
PCDHA1-201ENST00000378133 LRRC10BA6NIK2 292 aa18.62■□□□□ 0.57
PCDHA1-201ENST00000378133 GTPBP6O43824 516 aaPredicted RBP18.62■□□□□ 0.57
PCDHA1-201ENST00000378133 ORC4O43929 436 aa18.62■□□□□ 0.57
PCDHA1-201ENST00000378133 SF3B3Q15393 1217 aaKnown RBP18.62■□□□□ 0.57
PCDHA1-201ENST00000378133 PFKFB3Q16875 520 aaPredicted RBP18.62■□□□□ 0.57
PCDHA1-201ENST00000378133 EFCAB13Q8IY85 973 aa18.62■□□□□ 0.57
PCDHA1-201ENST00000378133 CNPY4Q8N129 248 aa18.62■□□□□ 0.57
PCDHA1-201ENST00000378133 NELFBQ8WX92 580 aa18.62■□□□□ 0.57
PCDHA1-201ENST00000378133 NUP88Q99567 741 aaPredicted RBP18.62■□□□□ 0.57
PCDHA1-201ENST00000378133 TFCP2L1Q9NZI6 479 aa18.62■□□□□ 0.57
PCDHA1-201ENST00000378133 RWDD2AQ9UIY3 292 aa18.62■□□□□ 0.57
PCDHA1-201ENST00000378133 TSPY2A6NKD2 308 aa18.62■□□□□ 0.57
PCDHA1-201ENST00000378133 GUCY2CP25092 1073 aa18.62■□□□□ 0.57
PCDHA1-201ENST00000378133 PAK1Q13153 545 aa18.62■□□□□ 0.57
PCDHA1-201ENST00000378133 GDAQ9Y2T3 454 aa18.62■□□□□ 0.57
PCDHA1-201ENST00000378133 ITIH6Q6UXX5 1313 aa18.62■□□□□ 0.57
PCDHA1-201ENST00000378133 PRPF6O94906 941 aaKnown RBP18.61■□□□□ 0.57
PCDHA1-201ENST00000378133 PRDX5P30044 214 aa18.61■□□□□ 0.57
PCDHA1-201ENST00000378133 TRAPPC10P48553 1259 aa18.61■□□□□ 0.57
PCDHA1-201ENST00000378133 COPB1P53618 953 aaKnown RBP18.61■□□□□ 0.57
PCDHA1-201ENST00000378133 MAP9Q49MG5 647 aa18.61■□□□□ 0.57
PCDHA1-201ENST00000378133 MEX3CQ5U5Q3 659 aaKnown RBP18.61■□□□□ 0.57
PCDHA1-201ENST00000378133 FBXO33Q7Z6M2 555 aa18.61■□□□□ 0.57
PCDHA1-201ENST00000378133 CRNKL1Q9BZJ0 848 aaKnown RBP18.61■□□□□ 0.57
PCDHA1-201ENST00000378133 GUCA1BQ9UMX6 200 aa18.61■□□□□ 0.57
PCDHA1-201ENST00000378133 JAG2Q9Y219 1238 aa18.61■□□□□ 0.57
PCDHA1-201ENST00000378133 USP14P54578 494 aa18.61■□□□□ 0.57
PCDHA1-201ENST00000378133 TCP11X2Q5H9J9 407 aa18.61■□□□□ 0.57
PCDHA1-201ENST00000378133 DRC1Q96MC2 740 aa18.61■□□□□ 0.57
PCDHA1-201ENST00000378133 KCNJ18B7U540 433 aa18.6■□□□□ 0.57
PCDHA1-201ENST00000378133 RPN1P04843 607 aaKnown RBP18.6■□□□□ 0.57
PCDHA1-201ENST00000378133 MCM3P25205 808 aa18.6■□□□□ 0.57
PCDHA1-201ENST00000378133 KCNJ12Q14500 433 aa18.6■□□□□ 0.57
PCDHA1-201ENST00000378133 ZNF658Q5TYW1 1059 aaPredicted RBP18.6■□□□□ 0.57
PCDHA1-201ENST00000378133 SMIM5Q71RC9 77 aa18.6■□□□□ 0.57
PCDHA1-201ENST00000378133 RASGRP4Q8TDF6 673 aa18.6■□□□□ 0.57
PCDHA1-201ENST00000378133 GPKOWQ92917 476 aaPredicted RBP eCLIP18.6■□□□□ 0.57
PCDHA1-201ENST00000378133 SMARCC1Q92922 1105 aaPredicted RBP18.6■□□□□ 0.57
PCDHA1-201ENST00000378133 DEF6Q9H4E7 631 aa18.6■□□□□ 0.57
PCDHA1-201ENST00000378133 HPCAL4Q9UM19 191 aa18.6■□□□□ 0.57
PCDHA1-201ENST00000378133 PRCPP42785 496 aa18.6■□□□□ 0.57
PCDHA1-201ENST00000378133 KCNQ4P56696 695 aa18.59■□□□□ 0.57
PCDHA1-201ENST00000378133 RCSD1Q6JBY9 416 aa18.59■□□□□ 0.57
PCDHA1-201ENST00000378133 SAMD1Q6SPF0 538 aaPredicted RBP18.59■□□□□ 0.57
PCDHA1-201ENST00000378133 C4orf32Q8N8J7 132 aa18.59■□□□□ 0.57
PCDHA1-201ENST00000378133 RIN2Q8WYP3 895 aaPredicted RBP18.59■□□□□ 0.57
PCDHA1-201ENST00000378133 FAM205AQ6ZU69 1335 aa18.59■□□□□ 0.57
PCDHA1-201ENST00000378133 ENC1O14682 589 aa18.59■□□□□ 0.57
PCDHA1-201ENST00000378133 KCNQ2O43526 872 aa18.59■□□□□ 0.57
PCDHA1-201ENST00000378133 KRT9P35527 623 aa18.59■□□□□ 0.57
PCDHA1-201ENST00000378133 STIM1Q13586 685 aa18.59■□□□□ 0.57
PCDHA1-201ENST00000378133 CLEC4GQ6UXB4 293 aa18.59■□□□□ 0.57
PCDHA1-201ENST00000378133 TRAPPC11Q7Z392 1133 aa18.59■□□□□ 0.57
PCDHA1-201ENST00000378133 BLIDQ8IZY5 108 aa18.59■□□□□ 0.57
PCDHA1-201ENST00000378133 ANKRD20A12PQ8NF67 263 aa18.59■□□□□ 0.57
PCDHA1-201ENST00000378133 PYM1Q9BRP8 204 aaKnown RBP18.59■□□□□ 0.57
PCDHA1-201ENST00000378133 ATP8A2Q9NTI2 1148 aa18.59■□□□□ 0.57
PCDHA1-201ENST00000378133 A0A087WUV0 522 aaPredicted RBP18.58■□□□□ 0.57
PCDHA1-201ENST00000378133 STAT6P42226 847 aa18.58■□□□□ 0.57
PCDHA1-201ENST00000378133 UBXN1Q04323 297 aa18.58■□□□□ 0.57
PCDHA1-201ENST00000378133 SPAG1Q07617 926 aa18.58■□□□□ 0.57
PCDHA1-201ENST00000378133 TADA2BQ86TJ2 420 aa18.58■□□□□ 0.57
PCDHA1-201ENST00000378133 GDAP1L1Q96MZ0 367 aa18.58■□□□□ 0.57
PCDHA1-201ENST00000378133 MCM9Q9NXL9 1143 aa18.58■□□□□ 0.57
PCDHA1-201ENST00000378133 HDAC6Q9UBN7 1215 aa18.58■□□□□ 0.57
PCDHA1-201ENST00000378133 TRIM10Q9UDY6 481 aa18.58■□□□□ 0.57
PCDHA1-201ENST00000378133 TRIM49BA6NDI0 452 aa18.58■□□□□ 0.56
PCDHA1-201ENST00000378133 HIBADHP31937 336 aaKnown RBP18.58■□□□□ 0.56
PCDHA1-201ENST00000378133 MICALL1Q8N3F8 863 aa18.58■□□□□ 0.56
PCDHA1-201ENST00000378133 STAG2Q8N3U4 1231 aa18.58■□□□□ 0.56
PCDHA1-201ENST00000378133 COG1Q8WTW3 980 aa18.58■□□□□ 0.56
PCDHA1-201ENST00000378133 CHP1Q99653 195 aa18.58■□□□□ 0.56
PCDHA1-201ENST00000378133 RMND1Q9NWS8 449 aa18.58■□□□□ 0.56
PCDHA1-201ENST00000378133 AFF2P51816 1311 aa18.58■□□□□ 0.56
PCDHA1-201ENST00000378133 DLEC1Q9Y238 1755 aa18.58■□□□□ 0.56
PCDHA1-201ENST00000378133 CPP00450 1065 aa18.58■□□□□ 0.56
PCDHA1-201ENST00000378133 USP17L8P0C7I0 530 aa18.58■□□□□ 0.56
PCDHA1-201ENST00000378133 KIF5BP33176 963 aa18.58■□□□□ 0.56
PCDHA1-201ENST00000378133 LONP1P36776 959 aaKnown RBP18.58■□□□□ 0.56
PCDHA1-201ENST00000378133 ARL6IP4Q66PJ3 421 aaKnown RBP18.58■□□□□ 0.56
PCDHA1-201ENST00000378133 MMS19Q96T76 1030 aa18.58■□□□□ 0.56
PCDHA1-201ENST00000378133 EPN1Q9Y6I3 576 aaPredicted RBP18.58■□□□□ 0.56
PCDHA1-201ENST00000378133 THSD7AQ9UPZ6 1657 aa18.57■□□□□ 0.56
PCDHA1-201ENST00000378133 A0A1B0GUL6 1792 aa18.57■□□□□ 0.56
PCDHA1-201ENST00000378133 PP2D1A8MPX8 630 aa18.57■□□□□ 0.56
PCDHA1-201ENST00000378133 CALML3P27482 149 aa18.57■□□□□ 0.56
PCDHA1-201ENST00000378133 GGCXP38435 758 aa18.57■□□□□ 0.56
PCDHA1-201ENST00000378133 RPS8P62241 208 aaKnown RBP18.57■□□□□ 0.56
PCDHA1-201ENST00000378133 TFAP4Q01664 338 aa18.57■□□□□ 0.56
PCDHA1-201ENST00000378133 PLIN2Q99541 437 aa18.57■□□□□ 0.56
PCDHA1-201ENST00000378133 CRACR2AQ9BSW2 395 aa18.57■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 76.1 ms