RNA–Protein interactions for RNA: ENST00000378016.4

SSPO-201, Transcript of SCO-spondin, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SSPO, Length 15,589 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSPO-201ENST00000378016 KRT3P12035 628 aa9.3□□□□□ -0.92
SSPO-201ENST00000378016 PLS3P13797 630 aa9.3□□□□□ -0.92
SSPO-201ENST00000378016 NCF2P19878 526 aaPredicted RBP9.3□□□□□ -0.92
SSPO-201ENST00000378016 POLD1P28340 1107 aa9.3□□□□□ -0.92
SSPO-201ENST00000378016 YWHAGP61981 247 aaKnown RBP eCLIP9.3□□□□□ -0.92
SSPO-201ENST00000378016 THEMISQ8N1K5 641 aaPredicted RBP9.3□□□□□ -0.92
SSPO-201ENST00000378016 NRBF2Q96F24 287 aa9.3□□□□□ -0.92
SSPO-201ENST00000378016 GEMIN8Q9NWZ8 242 aaKnown RBP9.3□□□□□ -0.92
SSPO-201ENST00000378016 ZNF148Q9UQR1 794 aa9.3□□□□□ -0.92
SSPO-201ENST00000378016 STK24Q9Y6E0 443 aa9.3□□□□□ -0.92
SSPO-201ENST00000378016 MAN1A2O60476 641 aa9.3□□□□□ -0.92
SSPO-201ENST00000378016 CYP2C19P33261 490 aa9.3□□□□□ -0.92
SSPO-201ENST00000378016 RAD23BP54727 409 aa9.3□□□□□ -0.92
SSPO-201ENST00000378016 C1orf146Q5VVC0 180 aa9.3□□□□□ -0.92
SSPO-201ENST00000378016 NUDCD1Q96RS6 583 aa9.3□□□□□ -0.92
SSPO-201ENST00000378016 SLC39A2Q9NP94 309 aa9.3□□□□□ -0.92
SSPO-201ENST00000378016 CASP2P42575 452 aa9.3□□□□□ -0.92
SSPO-201ENST00000378016 EIF4A2Q14240 407 aaKnown RBP9.3□□□□□ -0.92
SSPO-201ENST00000378016 SNX29Q8TEQ0 813 aa9.3□□□□□ -0.92
SSPO-201ENST00000378016 HDAC11Q96DB2 347 aa9.3□□□□□ -0.92
SSPO-201ENST00000378016 HAUS2Q9NVX0 235 aa9.3□□□□□ -0.92
SSPO-201ENST00000378016 PNMA6EA0A0J9YXQ4 647 aa9.3□□□□□ -0.92
SSPO-201ENST00000378016 KIF22Q14807 665 aa9.3□□□□□ -0.92
SSPO-201ENST00000378016 VPS54Q9P1Q0 977 aa9.3□□□□□ -0.92
SSPO-201ENST00000378016 SLFNL1Q499Z3 407 aa9.3□□□□□ -0.92
SSPO-201ENST00000378016 KRT25Q7Z3Z0 450 aa9.3□□□□□ -0.92
SSPO-201ENST00000378016 NME8Q8N427 588 aa9.3□□□□□ -0.92
SSPO-201ENST00000378016 SEPT8Q92599 483 aa9.3□□□□□ -0.92
SSPO-201ENST00000378016 STXBP3O00186 592 aa9.3□□□□□ -0.92
SSPO-201ENST00000378016 IRS4O14654 1257 aaPredicted RBP9.3□□□□□ -0.92
SSPO-201ENST00000378016 ST5P78524 1137 aa9.3□□□□□ -0.92
SSPO-201ENST00000378016 ZMYND12Q9H0C1 365 aa9.3□□□□□ -0.92
SSPO-201ENST00000378016 HEXIM1O94992 359 aaKnown RBP9.3□□□□□ -0.92
SSPO-201ENST00000378016 HNRNPCP07910 306 aaKnown RBP eCLIP9.3□□□□□ -0.92
SSPO-201ENST00000378016 RCOR1Q9UKL0 485 aa9.3□□□□□ -0.92
SSPO-201ENST00000378016 SATB2Q9UPW6 733 aa9.3□□□□□ -0.92
SSPO-201ENST00000378016 HNRNPH1P31943 449 aaKnown RBP9.3□□□□□ -0.92
SSPO-201ENST00000378016 TRIM42Q8IWZ5 723 aa9.3□□□□□ -0.92
SSPO-201ENST00000378016 ZNF274Q96GC6 653 aaPredicted RBP9.3□□□□□ -0.92
SSPO-201ENST00000378016 CUL4BQ13620 913 aa9.3□□□□□ -0.92
SSPO-201ENST00000378016 VSTM4Q8IW00 320 aa9.3□□□□□ -0.92
SSPO-201ENST00000378016 TTC21BQ7Z4L5 1316 aa9.3□□□□□ -0.92
SSPO-201ENST00000378016 GPAA1O43292 621 aa9.29□□□□□ -0.92
SSPO-201ENST00000378016 TOM1L1O75674 476 aa9.29□□□□□ -0.92
SSPO-201ENST00000378016 SEPT2Q15019 361 aa9.29□□□□□ -0.92
SSPO-201ENST00000378016 TRIML1Q8N9V2 468 aa9.29□□□□□ -0.92
SSPO-201ENST00000378016 TRIM56Q9BRZ2 755 aaKnown RBP9.29□□□□□ -0.92
SSPO-201ENST00000378016 KRT80Q6KB66 452 aa9.29□□□□□ -0.92
SSPO-201ENST00000378016 TYW1Q9NV66 732 aaKnown RBP9.29□□□□□ -0.92
SSPO-201ENST00000378016 CHGBP05060 677 aa9.29□□□□□ -0.92
SSPO-201ENST00000378016 MESDQ14696 234 aa9.29□□□□□ -0.92
SSPO-201ENST00000378016 GYG2O15488 501 aa9.29□□□□□ -0.92
SSPO-201ENST00000378016 PICALMQ13492 652 aa9.29□□□□□ -0.92
SSPO-201ENST00000378016 NONOQ15233 471 aaKnown RBP eCLIP9.29□□□□□ -0.92
SSPO-201ENST00000378016 NBPF20Q3BBV1 942 aa9.29□□□□□ -0.92
SSPO-201ENST00000378016 TTLL11Q8NHH1 800 aa9.29□□□□□ -0.92
SSPO-201ENST00000378016 KIF9Q9HAQ2 790 aa9.29□□□□□ -0.92
SSPO-201ENST00000378016 SPZ1Q9BXG8 430 aa9.29□□□□□ -0.92
SSPO-201ENST00000378016 WDR46O15213 610 aaKnown RBP9.29□□□□□ -0.92
SSPO-201ENST00000378016 STRN3Q13033 797 aa9.29□□□□□ -0.92
SSPO-201ENST00000378016 NBPF10Q6P3W6 841 aaKnown RBP9.29□□□□□ -0.92
SSPO-201ENST00000378016 PDS5BQ9NTI5 1447 aa9.29□□□□□ -0.92
SSPO-201ENST00000378016 H7C0C1 242 aa9.29□□□□□ -0.92
SSPO-201ENST00000378016 ADD1P35611 737 aaKnown RBP9.29□□□□□ -0.92
SSPO-201ENST00000378016 ATP5OP48047 213 aa9.29□□□□□ -0.92
SSPO-201ENST00000378016 FBXW10Q5XX13 1052 aa9.29□□□□□ -0.92
SSPO-201ENST00000378016 MAML1Q92585 1016 aa9.29□□□□□ -0.92
SSPO-201ENST00000378016 DBNDD2Q9BQY9 259 aa9.29□□□□□ -0.92
SSPO-201ENST00000378016 OSBPL1AQ9BXW6 950 aa9.29□□□□□ -0.92
SSPO-201ENST00000378016 KRT82Q9NSB4 513 aa9.29□□□□□ -0.92
SSPO-201ENST00000378016 ATP5HO75947 161 aa9.29□□□□□ -0.92
SSPO-201ENST00000378016 GRK7Q8WTQ7 553 aa9.29□□□□□ -0.92
SSPO-201ENST00000378016 TBK1Q9UHD2 729 aa9.29□□□□□ -0.92
SSPO-201ENST00000378016 LONP1P36776 959 aaKnown RBP9.29□□□□□ -0.92
SSPO-201ENST00000378016 RWDD2BP57060 319 aa9.29□□□□□ -0.92
SSPO-201ENST00000378016 RDH13Q8NBN7 331 aa9.29□□□□□ -0.92
SSPO-201ENST00000378016 XAGE2Q96GT9 111 aa9.29□□□□□ -0.92
SSPO-201ENST00000378016 PRDM1O75626 825 aa9.29□□□□□ -0.92
SSPO-201ENST00000378016 TECP42680 631 aa9.29□□□□□ -0.92
SSPO-201ENST00000378016 ADAM9Q13443 819 aa9.29□□□□□ -0.92
SSPO-201ENST00000378016 H0Y3Z8 333 aa9.29□□□□□ -0.92
SSPO-201ENST00000378016 GSTA4O15217 222 aa9.29□□□□□ -0.92
SSPO-201ENST00000378016 INHBAP08476 426 aa9.29□□□□□ -0.92
SSPO-201ENST00000378016 GRAMD1CQ8IYS0 662 aa9.29□□□□□ -0.92
SSPO-201ENST00000378016 RETREG2Q8NC44 543 aa9.29□□□□□ -0.92
SSPO-201ENST00000378016 NHEJ1Q9H9Q4 299 aaPredicted RBP9.29□□□□□ -0.92
SSPO-201ENST00000378016 LMNB1P20700 586 aa9.28□□□□□ -0.92
SSPO-201ENST00000378016 PDCD2Q16342 344 aaPredicted RBP9.28□□□□□ -0.92
SSPO-201ENST00000378016 SUCLG2Q96I99 432 aa9.28□□□□□ -0.92
SSPO-201ENST00000378016 MCF2P10911 925 aa9.28□□□□□ -0.92
SSPO-201ENST00000378016 MAGOHP61326 146 aaKnown RBP9.28□□□□□ -0.92
SSPO-201ENST00000378016 ARHGAP18Q8N392 663 aa9.28□□□□□ -0.92
SSPO-201ENST00000378016 TRIML2Q8N7C3 387 aa9.28□□□□□ -0.92
SSPO-201ENST00000378016 HIPK4Q8NE63 616 aa9.28□□□□□ -0.92
SSPO-201ENST00000378016 CYP27A1Q02318 531 aa9.28□□□□□ -0.92
SSPO-201ENST00000378016 SCRN1Q12765 414 aa9.28□□□□□ -0.92
SSPO-201ENST00000378016 CCDC125Q86Z20 511 aa9.28□□□□□ -0.92
SSPO-201ENST00000378016 TMEM60Q9H2L4 133 aa9.28□□□□□ -0.92
SSPO-201ENST00000378016 SAMSN1Q9NSI8 373 aaKnown RBP9.28□□□□□ -0.92
SSPO-201ENST00000378016 BIN2Q9UBW5 565 aaPredicted RBP9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 762.1 ms