RNA–Protein interactions for RNA: ENST00000376656.8

TRIM39-201, Transcript of tripartite motif containing 39, humanhuman

APPRIS P4 TSL 2 BASIC

Gene TRIM39, Length 3,338 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-201ENST00000376656 ANKRD18AQ8IVF6 992 aa18.46■□□□□ 0.55
TRIM39-201ENST00000376656 AMOTL1Q8IY63 956 aa18.46■□□□□ 0.55
TRIM39-201ENST00000376656 ZNF263O14978 683 aa18.45■□□□□ 0.54
TRIM39-201ENST00000376656 IPO7O95373 1038 aaKnown RBP18.45■□□□□ 0.54
TRIM39-201ENST00000376656 SRGNP10124 158 aa18.45■□□□□ 0.54
TRIM39-201ENST00000376656 SLC5A1P13866 664 aa18.45■□□□□ 0.54
TRIM39-201ENST00000376656 DNM2P50570 870 aa18.45■□□□□ 0.54
TRIM39-201ENST00000376656 KRT26Q7Z3Y9 468 aa18.45■□□□□ 0.54
TRIM39-201ENST00000376656 MMGT1Q8N4V1 131 aa18.45■□□□□ 0.54
TRIM39-201ENST00000376656 TSEN2Q8NCE0 465 aaKnown RBP18.45■□□□□ 0.54
TRIM39-201ENST00000376656 SECISBP2LQ93073 1101 aaKnown RBP18.45■□□□□ 0.54
TRIM39-201ENST00000376656 ARL8AQ96BM9 186 aa18.45■□□□□ 0.54
TRIM39-201ENST00000376656 NCAPGQ9BPX3 1015 aa18.45■□□□□ 0.54
TRIM39-201ENST00000376656 PYM1Q9BRP8 204 aaKnown RBP18.45■□□□□ 0.54
TRIM39-201ENST00000376656 LRWD1Q9UFC0 647 aa18.45■□□□□ 0.54
TRIM39-201ENST00000376656 SNX12Q9UMY4 172 aa18.45■□□□□ 0.54
TRIM39-201ENST00000376656 LOC102724159A0A0B4J2E5 919 aa18.45■□□□□ 0.54
TRIM39-201ENST00000376656 VEGFAP15692 232 aaPredicted RBP18.45■□□□□ 0.54
TRIM39-201ENST00000376656 MATR3P43243 847 aaKnown RBP eCLIP18.45■□□□□ 0.54
TRIM39-201ENST00000376656 PWP2Q15269 919 aaKnown RBP18.45■□□□□ 0.54
TRIM39-201ENST00000376656 IQCEQ6IPM2 695 aa18.45■□□□□ 0.54
TRIM39-201ENST00000376656 ADGRA1Q86SQ6 560 aa18.45■□□□□ 0.54
TRIM39-201ENST00000376656 SH3GL2Q99962 352 aa18.45■□□□□ 0.54
TRIM39-201ENST00000376656 THAP9Q9H5L6 903 aa18.45■□□□□ 0.54
TRIM39-201ENST00000376656 ZNHIT6Q9NWK9 470 aaKnown RBP18.45■□□□□ 0.54
TRIM39-201ENST00000376656 SMARCAL1Q9NZC9 954 aa18.45■□□□□ 0.54
TRIM39-201ENST00000376656 CYP2D7A0A087X1C5 515 aa18.44■□□□□ 0.54
TRIM39-201ENST00000376656 SHTN1A0MZ66 631 aa18.44■□□□□ 0.54
TRIM39-201ENST00000376656 TROAPQ12815 778 aa18.44■□□□□ 0.54
TRIM39-201ENST00000376656 CCDC70Q6NSX1 233 aa18.44■□□□□ 0.54
TRIM39-201ENST00000376656 EXOC1Q9NV70 894 aa18.44■□□□□ 0.54
TRIM39-201ENST00000376656 MAGEC2Q9UBF1 373 aaPredicted RBP18.44■□□□□ 0.54
TRIM39-201ENST00000376656 CAPN6Q9Y6Q1 641 aa18.44■□□□□ 0.54
TRIM39-201ENST00000376656 GOLGA8KD6RF30 607 aa18.44■□□□□ 0.54
TRIM39-201ENST00000376656 BCAMP50895 628 aa18.44■□□□□ 0.54
TRIM39-201ENST00000376656 KIF5AQ12840 1032 aa18.44■□□□□ 0.54
TRIM39-201ENST00000376656 TTMPQ5BVD1 217 aa18.44■□□□□ 0.54
TRIM39-201ENST00000376656 TUBGCP2Q9BSJ2 902 aa18.44■□□□□ 0.54
TRIM39-201ENST00000376656 NLRP5P59047 1200 aa18.44■□□□□ 0.54
TRIM39-201ENST00000376656 KCNV1Q6PIU1 500 aa18.44■□□□□ 0.54
TRIM39-201ENST00000376656 TMTC3Q6ZXV5 915 aa18.44■□□□□ 0.54
TRIM39-201ENST00000376656 CCDC170Q8IYT3 715 aa18.44■□□□□ 0.54
TRIM39-201ENST00000376656 MROH5Q6ZUA9 1318 aa18.43■□□□□ 0.54
TRIM39-201ENST00000376656 CNTNAP5Q8WYK1 1306 aa18.43■□□□□ 0.54
TRIM39-201ENST00000376656 PDE8AO60658 829 aa18.43■□□□□ 0.54
TRIM39-201ENST00000376656 PLEKP08567 350 aaPredicted RBP18.43■□□□□ 0.54
TRIM39-201ENST00000376656 HNRNPH1P31943 449 aaKnown RBP18.43■□□□□ 0.54
TRIM39-201ENST00000376656 VAV2P52735 878 aa18.43■□□□□ 0.54
TRIM39-201ENST00000376656 NAALADL2Q58DX5 795 aa18.43■□□□□ 0.54
TRIM39-201ENST00000376656 GBP6Q6ZN66 633 aa18.43■□□□□ 0.54
TRIM39-201ENST00000376656 FNBP4Q8N3X1 1017 aaPredicted RBP18.43■□□□□ 0.54
TRIM39-201ENST00000376656 SRBD1Q8N5C6 995 aaKnown RBP18.43■□□□□ 0.54
TRIM39-201ENST00000376656 MLXIPQ9HAP2 919 aa18.43■□□□□ 0.54
TRIM39-201ENST00000376656 EHD2Q9NZN4 543 aa18.43■□□□□ 0.54
TRIM39-201ENST00000376656 LRP2BPQ9P2M1 347 aa18.43■□□□□ 0.54
TRIM39-201ENST00000376656 PP2D1A8MPX8 630 aa18.43■□□□□ 0.54
TRIM39-201ENST00000376656 ZBED6P86452 979 aa18.43■□□□□ 0.54
TRIM39-201ENST00000376656 TBC1D8BQ0IIM8 1120 aa18.43■□□□□ 0.54
TRIM39-201ENST00000376656 NKX1-1Q15270 411 aaPredicted RBP18.43■□□□□ 0.54
TRIM39-201ENST00000376656 SWT1Q5T5J6 900 aaKnown RBP18.43■□□□□ 0.54
TRIM39-201ENST00000376656 TTI2Q6NXR4 508 aa18.43■□□□□ 0.54
TRIM39-201ENST00000376656 TOM1L2Q6ZVM7 507 aa18.43■□□□□ 0.54
TRIM39-201ENST00000376656 SPATA4Q8NEY3 305 aa18.43■□□□□ 0.54
TRIM39-201ENST00000376656 PCMTD1Q96MG8 357 aaPredicted RBP18.43■□□□□ 0.54
TRIM39-201ENST00000376656 PSMB7Q99436 277 aa18.43■□□□□ 0.54
TRIM39-201ENST00000376656 PLIN2Q99541 437 aa18.43■□□□□ 0.54
TRIM39-201ENST00000376656 RBM28Q9NW13 759 aaKnown RBP18.43■□□□□ 0.54
TRIM39-201ENST00000376656 KLRC4O43908 158 aa18.43■□□□□ 0.54
TRIM39-201ENST00000376656 CCDC96Q2M329 555 aa18.43■□□□□ 0.54
TRIM39-201ENST00000376656 FKBP15Q5T1M5 1219 aa18.43■□□□□ 0.54
TRIM39-201ENST00000376656 MYCBPQ99417 103 aaPredicted RBP18.43■□□□□ 0.54
TRIM39-201ENST00000376656 DISC1Q9NRI5 854 aa18.43■□□□□ 0.54
TRIM39-201ENST00000376656 ARAP2Q8WZ64 1704 aa18.42■□□□□ 0.54
TRIM39-201ENST00000376656 CYP7A1P22680 504 aa18.42■□□□□ 0.54
TRIM39-201ENST00000376656 INPP5BP32019 993 aa18.42■□□□□ 0.54
TRIM39-201ENST00000376656 C4orf32Q8N8J7 132 aa18.42■□□□□ 0.54
TRIM39-201ENST00000376656 DUSP9Q99956 384 aaKnown RBP18.42■□□□□ 0.54
TRIM39-201ENST00000376656 ASAP1Q9ULH1 1129 aa18.42■□□□□ 0.54
TRIM39-201ENST00000376656 MYH10P35580 1976 aa18.42■□□□□ 0.54
TRIM39-201ENST00000376656 NKRFO15226 690 aaKnown RBP eCLIP18.42■□□□□ 0.54
TRIM39-201ENST00000376656 PDCLQ13371 301 aa18.42■□□□□ 0.54
TRIM39-201ENST00000376656 NUTM2BA6NNL0 878 aaPredicted RBP18.41■□□□□ 0.54
TRIM39-201ENST00000376656 NUTM2EB1AL46 878 aaPredicted RBP18.41■□□□□ 0.54
TRIM39-201ENST00000376656 PSMA7O14818 248 aa18.41■□□□□ 0.54
TRIM39-201ENST00000376656 OPA1O60313 960 aa18.41■□□□□ 0.54
TRIM39-201ENST00000376656 MOCS3O95396 460 aa18.41■□□□□ 0.54
TRIM39-201ENST00000376656 CXCR5P32302 372 aa18.41■□□□□ 0.54
TRIM39-201ENST00000376656 LONP1P36776 959 aaKnown RBP18.41■□□□□ 0.54
TRIM39-201ENST00000376656 NFRKBQ6P4R8 1299 aa18.41■□□□□ 0.54
TRIM39-201ENST00000376656 CSGALNACT2Q8N6G5 542 aa18.41■□□□□ 0.54
TRIM39-201ENST00000376656 GPATCH11Q8N954 259 aa18.41■□□□□ 0.54
TRIM39-201ENST00000376656 CEP89Q96ST8 783 aa18.41■□□□□ 0.54
TRIM39-201ENST00000376656 ANAPC4Q9UJX5 808 aa18.41■□□□□ 0.54
TRIM39-201ENST00000376656 IQSEC3Q9UPP2 1182 aaPredicted RBP18.41■□□□□ 0.54
TRIM39-201ENST00000376656 TRAPPC10P48553 1259 aa18.41■□□□□ 0.54
TRIM39-201ENST00000376656 NUP58Q9BVL2 599 aa18.41■□□□□ 0.54
TRIM39-201ENST00000376656 SH2D3CQ8N5H7 860 aa18.41■□□□□ 0.54
TRIM39-201ENST00000376656 RASSF8Q8NHQ8 419 aa18.41■□□□□ 0.54
TRIM39-201ENST00000376656 POLD4Q9HCU8 107 aa18.41■□□□□ 0.54
TRIM39-201ENST00000376656 ZNF572Q7Z3I7 529 aaPredicted RBP18.4■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 82.4 ms