RNA–Protein interactions for RNA: ENST00000376497.7

CLCN6-207, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 3 BASIC

Gene CLCN6, Length 814 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-207ENST00000376497 MROH7Q68CQ1 1323 aa18.23■□□□□ 0.51
CLCN6-207ENST00000376497 CDH23Q9H251 3354 aa18.22■□□□□ 0.51
CLCN6-207ENST00000376497 ADCY6O43306 1168 aa18.22■□□□□ 0.51
CLCN6-207ENST00000376497 TIMP1P01033 207 aa18.22■□□□□ 0.51
CLCN6-207ENST00000376497 APPP05067 770 aa18.22■□□□□ 0.51
CLCN6-207ENST00000376497 CDK7P50613 346 aa18.22■□□□□ 0.51
CLCN6-207ENST00000376497 GJA9P57773 515 aa18.22■□□□□ 0.51
CLCN6-207ENST00000376497 LRRFIP1Q32MZ4 808 aaKnown RBP18.22■□□□□ 0.51
CLCN6-207ENST00000376497 CCDC144BQ3MJ40 725 aa18.22■□□□□ 0.51
CLCN6-207ENST00000376497 PCSK9Q8NBP7 692 aaKnown RBP18.22■□□□□ 0.51
CLCN6-207ENST00000376497 MAFAQ8NHW3 353 aaPredicted RBP18.22■□□□□ 0.51
CLCN6-207ENST00000376497 MYLIPQ8WY64 445 aa18.22■□□□□ 0.51
CLCN6-207ENST00000376497 GLT1D1Q96MS3 346 aa18.22■□□□□ 0.51
CLCN6-207ENST00000376497 UPF3AQ9H1J1 476 aaKnown RBP18.22■□□□□ 0.51
CLCN6-207ENST00000376497 TBX21Q9UL17 535 aa18.22■□□□□ 0.51
CLCN6-207ENST00000376497 TTC41PQ6P2S7 1318 aa18.22■□□□□ 0.51
CLCN6-207ENST00000376497 HSFX4A0A1B0GTS1 333 aaPredicted RBP18.21■□□□□ 0.51
CLCN6-207ENST00000376497 HSFX3A0A1B0GWH4 333 aaPredicted RBP18.21■□□□□ 0.51
CLCN6-207ENST00000376497 ASGR1P07306 291 aa18.21■□□□□ 0.51
CLCN6-207ENST00000376497 C6orf222P0C671 652 aaPredicted RBP18.21■□□□□ 0.51
CLCN6-207ENST00000376497 BMP3P12645 472 aa18.21■□□□□ 0.51
CLCN6-207ENST00000376497 NKX3-2P78367 333 aa18.21■□□□□ 0.51
CLCN6-207ENST00000376497 PDE4BQ07343 736 aa18.21■□□□□ 0.51
CLCN6-207ENST00000376497 SLFN13Q68D06 897 aa18.21■□□□□ 0.51
CLCN6-207ENST00000376497 ARMCX2Q7L311 632 aa18.21■□□□□ 0.51
CLCN6-207ENST00000376497 LRRC47Q8N1G4 583 aaKnown RBP18.21■□□□□ 0.51
CLCN6-207ENST00000376497 NACAP1Q9BZK3 213 aa18.21■□□□□ 0.51
CLCN6-207ENST00000376497 KATNBL1Q9H079 304 aa18.21■□□□□ 0.51
CLCN6-207ENST00000376497 SPC25Q9HBM1 224 aa18.21■□□□□ 0.51
CLCN6-207ENST00000376497 TSPY3P0CV98 308 aa18.2■□□□□ 0.5
CLCN6-207ENST00000376497 TSPY8P0CW00 308 aa18.2■□□□□ 0.5
CLCN6-207ENST00000376497 IRX5P78411 483 aaPredicted RBP18.2■□□□□ 0.5
CLCN6-207ENST00000376497 MFSD5Q6N075 450 aa18.2■□□□□ 0.5
CLCN6-207ENST00000376497 SEC62Q99442 399 aaKnown RBP18.2■□□□□ 0.5
CLCN6-207ENST00000376497 TMEM232C9JQI7 657 aa18.19■□□□□ 0.5
CLCN6-207ENST00000376497 ARVCFO00192 962 aa18.19■□□□□ 0.5
CLCN6-207ENST00000376497 SLC3A2P08195 630 aaKnown RBP18.19■□□□□ 0.5
CLCN6-207ENST00000376497 STAT2P52630 851 aa18.19■□□□□ 0.5
CLCN6-207ENST00000376497 TFAP4Q01664 338 aa18.19■□□□□ 0.5
CLCN6-207ENST00000376497 FAM160B2Q86V87 743 aa18.19■□□□□ 0.5
CLCN6-207ENST00000376497 CCDC144CPQ8IYA2 1237 aa18.19■□□□□ 0.5
CLCN6-207ENST00000376497 FAM133AQ8N9E0 248 aa18.19■□□□□ 0.5
CLCN6-207ENST00000376497 PI4K2BQ8TCG2 481 aa18.19■□□□□ 0.5
CLCN6-207ENST00000376497 CHURC1Q8WUH1 139 aa18.19■□□□□ 0.5
CLCN6-207ENST00000376497 ACAD9Q9H845 621 aa18.19■□□□□ 0.5
CLCN6-207ENST00000376497 ZNF536O15090 1300 aa18.19■□□□□ 0.5
CLCN6-207ENST00000376497 A0A0U1RQG5 324 aaPredicted RBP18.18■□□□□ 0.5
CLCN6-207ENST00000376497 ERC2O15083 957 aa18.18■□□□□ 0.5
CLCN6-207ENST00000376497 CTAGE5O15320 804 aa18.18■□□□□ 0.5
CLCN6-207ENST00000376497 PLA2G6O60733 806 aa18.18■□□□□ 0.5
CLCN6-207ENST00000376497 FOSL2P15408 326 aa18.18■□□□□ 0.5
CLCN6-207ENST00000376497 PPARAQ07869 468 aa18.18■□□□□ 0.5
CLCN6-207ENST00000376497 GNASQ5JWF2 1037 aa18.18■□□□□ 0.5
CLCN6-207ENST00000376497 ZMYM1Q5SVZ6 1142 aa18.18■□□□□ 0.5
CLCN6-207ENST00000376497 STAG1Q8WVM7 1258 aa18.18■□□□□ 0.5
CLCN6-207ENST00000376497 GMCL1Q96IK5 515 aa18.18■□□□□ 0.5
CLCN6-207ENST00000376497 BUD13Q9BRD0 619 aaKnown RBP eCLIP18.18■□□□□ 0.55e-10■■□□□ 14.3
CLCN6-207ENST00000376497 NAPBQ9H115 298 aa18.18■□□□□ 0.5
CLCN6-207ENST00000376497 DNAJB2P25686 324 aa18.17■□□□□ 0.5
CLCN6-207ENST00000376497 CNTN2Q02246 1040 aa18.17■□□□□ 0.5
CLCN6-207ENST00000376497 PPIGQ13427 754 aaKnown RBP eCLIP18.17■□□□□ 0.52e-12■■■□□ 15.8
CLCN6-207ENST00000376497 TKFCQ3LXA3 575 aa18.17■□□□□ 0.5
CLCN6-207ENST00000376497 PPP4R3BQ5MIZ7 849 aa18.17■□□□□ 0.5
CLCN6-207ENST00000376497 FAM126BQ8IXS8 530 aa18.17■□□□□ 0.5
CLCN6-207ENST00000376497 VTI1AQ96AJ9 217 aa18.17■□□□□ 0.5
CLCN6-207ENST00000376497 A1CFQ9NQ94 594 aaKnown RBP18.17■□□□□ 0.5
CLCN6-207ENST00000376497 HOMER2Q9NSB8 354 aa18.17■□□□□ 0.5
CLCN6-207ENST00000376497 PRUNE2Q8WUY3 3088 aa18.17■□□□□ 0.5
CLCN6-207ENST00000376497 CUL9Q8IWT3 2517 aa18.16■□□□□ 0.5
CLCN6-207ENST00000376497 LRRC37A2A6NM11 1700 aa18.16■□□□□ 0.5
CLCN6-207ENST00000376497 SOWAHBA6NEL2 793 aa18.16■□□□□ 0.5
CLCN6-207ENST00000376497 ASB14A6NK59 587 aa18.16■□□□□ 0.5
CLCN6-207ENST00000376497 SLC1A4P43007 532 aa18.16■□□□□ 0.5
CLCN6-207ENST00000376497 GRIN2CQ14957 1233 aa18.16■□□□□ 0.5
CLCN6-207ENST00000376497 TMEM240Q5SV17 173 aa18.16■□□□□ 0.5
CLCN6-207ENST00000376497 CCDC174Q6PII3 467 aa18.16■□□□□ 0.5
CLCN6-207ENST00000376497 C16orf59Q7L2K0 433 aa18.16■□□□□ 0.5
CLCN6-207ENST00000376497 AGBL1Q96MI9 1066 aa18.16■□□□□ 0.5
CLCN6-207ENST00000376497 FSD1Q9BTV5 496 aa18.16■□□□□ 0.5
CLCN6-207ENST00000376497 RNF146Q9NTX7 359 aa18.16■□□□□ 0.5
CLCN6-207ENST00000376497 GNEQ9Y223 722 aaKnown RBP18.16■□□□□ 0.5
CLCN6-207ENST00000376497 SALL3Q9BXA9 1300 aa18.16■□□□□ 0.5
CLCN6-207ENST00000376497 LCTP09848 1927 aa18.15■□□□□ 0.5
CLCN6-207ENST00000376497 C11orf97A0A1B0GVM6 126 aaPredicted RBP18.15■□□□□ 0.5
CLCN6-207ENST00000376497 TLR3O15455 904 aaKnown RBP18.15■□□□□ 0.5
CLCN6-207ENST00000376497 CD4P01730 458 aa18.15■□□□□ 0.5
CLCN6-207ENST00000376497 MCCP23508 829 aa18.15■□□□□ 0.5
CLCN6-207ENST00000376497 TNFAIP2Q03169 654 aa18.15■□□□□ 0.5
CLCN6-207ENST00000376497 RASIP1Q5U651 963 aa18.15■□□□□ 0.5
CLCN6-207ENST00000376497 RCSD1Q6JBY9 416 aa18.15■□□□□ 0.5
CLCN6-207ENST00000376497 TMEM199Q8N511 208 aa18.15■□□□□ 0.5
CLCN6-207ENST00000376497 TRERF1Q96PN7 1200 aa18.15■□□□□ 0.5
CLCN6-207ENST00000376497 ZNF576Q9H609 170 aa18.15■□□□□ 0.5
CLCN6-207ENST00000376497 DDX52Q9Y2R4 599 aaKnown RBP eCLIP18.15■□□□□ 0.5
CLCN6-207ENST00000376497 ASTN1O14525 1302 aa18.15■□□□□ 0.5
CLCN6-207ENST00000376497 VCANP13611 3396 aa18.14■□□□□ 0.5
CLCN6-207ENST00000376497 FOXP2O15409 715 aa18.14■□□□□ 0.49
CLCN6-207ENST00000376497 CSF2RAP15509 400 aa18.14■□□□□ 0.49
CLCN6-207ENST00000376497 SLC43A3Q8NBI5 491 aa18.14■□□□□ 0.49
CLCN6-207ENST00000376497 EXOC6Q8TAG9 804 aa18.14■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms