RNA–Protein interactions for RNA: ENST00000376259.6

TNFRSF1B-201, Transcript of TNF receptor superfamily member 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF1B, Length 3,683 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1B-201ENST00000376259 ERVK-24P63145 666 aa16.05■□□□□ 0.16
TNFRSF1B-201ENST00000376259 CLEC10AQ8IUN9 316 aa16.05■□□□□ 0.16
TNFRSF1B-201ENST00000376259 PROCA1Q8NCQ7 364 aaPredicted RBP16.05■□□□□ 0.16
TNFRSF1B-201ENST00000376259 NGLY1Q96IV0 654 aa16.05■□□□□ 0.16
TNFRSF1B-201ENST00000376259 TMX4Q9H1E5 349 aaPredicted RBP16.05■□□□□ 0.16
TNFRSF1B-201ENST00000376259 C6orf50Q9HD87 102 aa16.05■□□□□ 0.16
TNFRSF1B-201ENST00000376259 EHD2Q9NZN4 543 aa16.05■□□□□ 0.16
TNFRSF1B-201ENST00000376259 ZKSCAN7Q9P0L1 754 aaPredicted RBP16.05■□□□□ 0.16
TNFRSF1B-201ENST00000376259 SAMM50Q9Y512 469 aa16.05■□□□□ 0.16
TNFRSF1B-201ENST00000376259 GOLGA6CA6NDK9 693 aa16.04■□□□□ 0.16
TNFRSF1B-201ENST00000376259 GOLGA6BA6NDN3 693 aa16.04■□□□□ 0.16
TNFRSF1B-201ENST00000376259 PRPF3O43395 683 aaKnown RBP16.04■□□□□ 0.16
TNFRSF1B-201ENST00000376259 GOLGA6DP0CG33 693 aa16.04■□□□□ 0.16
TNFRSF1B-201ENST00000376259 RASSF7Q02833 373 aa16.04■□□□□ 0.16
TNFRSF1B-201ENST00000376259 CKAP4Q07065 602 aaKnown RBP16.04■□□□□ 0.16
TNFRSF1B-201ENST00000376259 TRIM28Q13263 835 aaKnown RBP16.04■□□□□ 0.16
TNFRSF1B-201ENST00000376259 DCAF17Q5H9S7 520 aaPredicted RBP16.04■□□□□ 0.16
TNFRSF1B-201ENST00000376259 GPATCH11Q8N954 259 aa16.04■□□□□ 0.16
TNFRSF1B-201ENST00000376259 MLXIPQ9HAP2 919 aa16.04■□□□□ 0.16
TNFRSF1B-201ENST00000376259 GOLGA6AQ9NYA3 693 aa16.04■□□□□ 0.16
TNFRSF1B-201ENST00000376259 AKAP12Q02952 1782 aa16.04■□□□□ 0.16
TNFRSF1B-201ENST00000376259 ESYT3A0FGR9 886 aa16.04■□□□□ 0.16
TNFRSF1B-201ENST00000376259 SHTN1A0MZ66 631 aa16.04■□□□□ 0.16
TNFRSF1B-201ENST00000376259 NCK2O43639 380 aa16.04■□□□□ 0.16
TNFRSF1B-201ENST00000376259 ZNF76P36508 570 aa16.04■□□□□ 0.16
TNFRSF1B-201ENST00000376259 USP8P40818 1118 aa16.04■□□□□ 0.16
TNFRSF1B-201ENST00000376259 PARP10Q53GL7 1025 aa16.04■□□□□ 0.16
TNFRSF1B-201ENST00000376259 SV2BQ7L1I2 683 aa16.04■□□□□ 0.16
TNFRSF1B-201ENST00000376259 TMC4Q7Z404 712 aa16.04■□□□□ 0.16
TNFRSF1B-201ENST00000376259 RRP36Q96EU6 259 aaKnown RBP16.04■□□□□ 0.16
TNFRSF1B-201ENST00000376259 MMS19Q96T76 1030 aa16.04■□□□□ 0.16
TNFRSF1B-201ENST00000376259 TMEM60Q9H2L4 133 aa16.04■□□□□ 0.16
TNFRSF1B-201ENST00000376259 XRN1Q8IZH2 1706 aaKnown RBP16.04■□□□□ 0.16
TNFRSF1B-201ENST00000376259 NWD1Q149M9 1564 aa16.04■□□□□ 0.16
TNFRSF1B-201ENST00000376259 GOLGA6L10A6NI86 522 aa16.04■□□□□ 0.16
TNFRSF1B-201ENST00000376259 LLGL1Q15334 1064 aa16.04■□□□□ 0.16
TNFRSF1B-201ENST00000376259 KRT79Q5XKE5 535 aa16.04■□□□□ 0.16
TNFRSF1B-201ENST00000376259 ADAT2Q7Z6V5 191 aaKnown RBP16.04■□□□□ 0.16
TNFRSF1B-201ENST00000376259 FAM76AQ8TAV0 307 aa16.04■□□□□ 0.16
TNFRSF1B-201ENST00000376259 RPGRQ92834 1020 aaKnown RBP16.04■□□□□ 0.16
TNFRSF1B-201ENST00000376259 SLC4A9Q96Q91 983 aa16.04■□□□□ 0.16
TNFRSF1B-201ENST00000376259 RNF225M0QZC1 329 aaPredicted RBP16.03■□□□□ 0.16
TNFRSF1B-201ENST00000376259 ZNF658Q5TYW1 1059 aaPredicted RBP16.03■□□□□ 0.16
TNFRSF1B-201ENST00000376259 KLHL34Q8N239 644 aa16.03■□□□□ 0.16
TNFRSF1B-201ENST00000376259 H7C1D1 291 aa16.03■□□□□ 0.16
TNFRSF1B-201ENST00000376259 RFC4P35249 363 aa16.03■□□□□ 0.16
TNFRSF1B-201ENST00000376259 LIG3P49916 1009 aa16.03■□□□□ 0.16
TNFRSF1B-201ENST00000376259 FAM114A1Q8IWE2 563 aa16.03■□□□□ 0.16
TNFRSF1B-201ENST00000376259 FANCGO15287 622 aa16.03■□□□□ 0.16
TNFRSF1B-201ENST00000376259 CCT5P48643 541 aa16.03■□□□□ 0.16
TNFRSF1B-201ENST00000376259 NONOQ15233 471 aaKnown RBP eCLIP16.03■□□□□ 0.162e-6■■■■□ 21.5
TNFRSF1B-201ENST00000376259 CCDC93Q567U6 631 aa16.03■□□□□ 0.16
TNFRSF1B-201ENST00000376259 FUT8Q9BYC5 575 aa16.03■□□□□ 0.16
TNFRSF1B-201ENST00000376259 DCP1AQ9NPI6 582 aaPredicted RBP16.03■□□□□ 0.16
TNFRSF1B-201ENST00000376259 FAM208AQ9UK61 1670 aaKnown RBP16.02■□□□□ 0.16
TNFRSF1B-201ENST00000376259 PPP1R3GB7ZBB8 358 aa16.02■□□□□ 0.16
TNFRSF1B-201ENST00000376259 SLC16A2P36021 539 aa16.02■□□□□ 0.16
TNFRSF1B-201ENST00000376259 TPTE2Q6XPS3 522 aa16.02■□□□□ 0.16
TNFRSF1B-201ENST00000376259 NHEJ1Q9H9Q4 299 aaPredicted RBP16.02■□□□□ 0.16
TNFRSF1B-201ENST00000376259 RRP15Q9Y3B9 282 aaKnown RBP16.02■□□□□ 0.16
TNFRSF1B-201ENST00000376259 XDHP47989 1333 aa16.02■□□□□ 0.16
TNFRSF1B-201ENST00000376259 HSF2BPO75031 334 aa16.02■□□□□ 0.15
TNFRSF1B-201ENST00000376259 PLEKP08567 350 aaPredicted RBP16.02■□□□□ 0.15
TNFRSF1B-201ENST00000376259 WHAMMP3Q1A5X7 153 aa16.02■□□□□ 0.15
TNFRSF1B-201ENST00000376259 ZFYVE27Q5T4F4 411 aa16.02■□□□□ 0.15
TNFRSF1B-201ENST00000376259 C8orf74Q6P047 294 aa16.02■□□□□ 0.15
TNFRSF1B-201ENST00000376259 MB21D1Q8N884 522 aa16.02■□□□□ 0.15
TNFRSF1B-201ENST00000376259 EHBP1Q8NDI1 1231 aa16.02■□□□□ 0.15
TNFRSF1B-201ENST00000376259 C8orf37Q96NL8 207 aa16.02■□□□□ 0.15
TNFRSF1B-201ENST00000376259 MINPP1Q9UNW1 487 aa16.02■□□□□ 0.15
TNFRSF1B-201ENST00000376259 TCRBV5S4A2TA0A5A2 114 aa16.01■□□□□ 0.15
TNFRSF1B-201ENST00000376259 ACTN2P35609 894 aa16.01■□□□□ 0.15
TNFRSF1B-201ENST00000376259 EYA3Q99504 573 aa16.01■□□□□ 0.15
TNFRSF1B-201ENST00000376259 HAUS4Q9H6D7 363 aa16.01■□□□□ 0.15
TNFRSF1B-201ENST00000376259 DISC1Q9NRI5 854 aa16.01■□□□□ 0.15
TNFRSF1B-201ENST00000376259 TMEM260Q9NX78 707 aa16.01■□□□□ 0.15
TNFRSF1B-201ENST00000376259 PACSIN2Q9UNF0 486 aaPredicted RBP16.01■□□□□ 0.15
TNFRSF1B-201ENST00000376259 ABCC12Q96J65 1359 aa16.01■□□□□ 0.15
TNFRSF1B-201ENST00000376259 POTEMA6NI47 508 aa16.01■□□□□ 0.15
TNFRSF1B-201ENST00000376259 MYO1CO00159 1063 aa16.01■□□□□ 0.15
TNFRSF1B-201ENST00000376259 FTCDO95954 541 aa16.01■□□□□ 0.15
TNFRSF1B-201ENST00000376259 GNAQP50148 359 aa16.01■□□□□ 0.15
TNFRSF1B-201ENST00000376259 PMS1P54277 932 aaKnown RBP16.01■□□□□ 0.15
TNFRSF1B-201ENST00000376259 TXNRD1Q16881 649 aa16.01■□□□□ 0.15
TNFRSF1B-201ENST00000376259 HERC4Q5GLZ8 1057 aaPredicted RBP16.01■□□□□ 0.15
TNFRSF1B-201ENST00000376259 FAM84BQ96KN1 310 aaPredicted RBP16.01■□□□□ 0.15
TNFRSF1B-201ENST00000376259 PIGSQ96S52 555 aa16.01■□□□□ 0.15
TNFRSF1B-201ENST00000376259 CEP89Q96ST8 783 aa16.01■□□□□ 0.15
TNFRSF1B-201ENST00000376259 PYM1Q9BRP8 204 aaKnown RBP16.01■□□□□ 0.15
TNFRSF1B-201ENST00000376259 SLIT1O75093 1534 aa16.01■□□□□ 0.15
TNFRSF1B-201ENST00000376259 BICDL2A1A5D9 508 aa16.01■□□□□ 0.15
TNFRSF1B-201ENST00000376259 DNM2P50570 870 aa16.01■□□□□ 0.15
TNFRSF1B-201ENST00000376259 TCP10Q12799 353 aa16.01■□□□□ 0.15
TNFRSF1B-201ENST00000376259 C3orf67Q6ZVT6 689 aa16.01■□□□□ 0.15
TNFRSF1B-201ENST00000376259 TBCKQ8TEA7 893 aa16.01■□□□□ 0.15
TNFRSF1B-201ENST00000376259 RAB34Q9BZG1 259 aa16.01■□□□□ 0.15
TNFRSF1B-201ENST00000376259 RWDD2AQ9UIY3 292 aa16.01■□□□□ 0.15
TNFRSF1B-201ENST00000376259 STK36Q9NRP7 1315 aa16■□□□□ 0.15
TNFRSF1B-201ENST00000376259 UFL1O94874 794 aa16■□□□□ 0.15
TNFRSF1B-201ENST00000376259 ZNF18P17022 549 aa16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms