RNA–Protein interactions for RNA: ENST00000374000.8

PHF20-202, Transcript of PHD finger protein 20, humanhuman

TSL 1 (best)

Gene PHF20, Length 1,814 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF20-202ENST00000374000 VWCEQ96DN2 955 aa13.73□□□□□ -0.21
PHF20-202ENST00000374000 ASTN1O14525 1302 aa13.73□□□□□ -0.21
PHF20-202ENST00000374000 NCOR1O75376 2440 aa13.73□□□□□ -0.21
PHF20-202ENST00000374000 TCF20Q9UGU0 1960 aaKnown RBP13.72□□□□□ -0.21
PHF20-202ENST00000374000 C11orf97A0A1B0GVM6 126 aaPredicted RBP13.72□□□□□ -0.21
PHF20-202ENST00000374000 CCL23P55773 120 aa13.72□□□□□ -0.21
PHF20-202ENST00000374000 CTR9Q6PD62 1173 aa13.72□□□□□ -0.21
PHF20-202ENST00000374000 ARMCX2Q7L311 632 aa13.72□□□□□ -0.21
PHF20-202ENST00000374000 RHPN1Q8TCX5 695 aa13.72□□□□□ -0.21
PHF20-202ENST00000374000 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.72□□□□□ -0.21
PHF20-202ENST00000374000 HIPK3Q9H422 1215 aa13.72□□□□□ -0.21
PHF20-202ENST00000374000 SPC25Q9HBM1 224 aa13.72□□□□□ -0.21
PHF20-202ENST00000374000 RAVER2Q9HCJ3 691 aaKnown RBP13.72□□□□□ -0.21
PHF20-202ENST00000374000 GRIN2DO15399 1336 aa13.72□□□□□ -0.21
PHF20-202ENST00000374000 ZBED9Q6R2W3 1325 aa13.71□□□□□ -0.21
PHF20-202ENST00000374000 NDUFB10O96000 172 aa13.71□□□□□ -0.21
PHF20-202ENST00000374000 NKX3-2P78367 333 aa13.71□□□□□ -0.21
PHF20-202ENST00000374000 CXCL17Q6UXB2 119 aa13.71□□□□□ -0.21
PHF20-202ENST00000374000 WNT8AQ9H1J5 351 aa13.71□□□□□ -0.21
PHF20-202ENST00000374000 ABHD16BQ9H3Z7 469 aa13.71□□□□□ -0.21
PHF20-202ENST00000374000 RFXAPO00287 272 aa13.71□□□□□ -0.22
PHF20-202ENST00000374000 ATP2A1O14983 1001 aa13.71□□□□□ -0.22
PHF20-202ENST00000374000 CNTN2Q02246 1040 aa13.71□□□□□ -0.22
PHF20-202ENST00000374000 PPP2R2DQ66LE6 453 aa13.71□□□□□ -0.22
PHF20-202ENST00000374000 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.71□□□□□ -0.22
PHF20-202ENST00000374000 CCDC144CPQ8IYA2 1237 aa13.71□□□□□ -0.22
PHF20-202ENST00000374000 NOC4LQ9BVI4 516 aaKnown RBP13.71□□□□□ -0.22
PHF20-202ENST00000374000 TRPV6Q9H1D0 765 aa13.71□□□□□ -0.22
PHF20-202ENST00000374000 EPHX3Q9H6B9 360 aa13.71□□□□□ -0.22
PHF20-202ENST00000374000 MCM3APO60318 1980 aa13.71□□□□□ -0.22
PHF20-202ENST00000374000 GREB1LQ9C091 1923 aaPredicted RBP13.7□□□□□ -0.22
PHF20-202ENST00000374000 F5H6K3 240 aa13.7□□□□□ -0.22
PHF20-202ENST00000374000 KLRC3Q07444 240 aa13.7□□□□□ -0.22
PHF20-202ENST00000374000 FTSJ3Q8IY81 847 aaKnown RBP13.7□□□□□ -0.22
PHF20-202ENST00000374000 PRPF38AQ8NAV1 312 aaKnown RBP13.7□□□□□ -0.22
PHF20-202ENST00000374000 C1QTNF1Q9BXJ1 281 aa13.7□□□□□ -0.22
PHF20-202ENST00000374000 BCL11AQ9H165 835 aa13.7□□□□□ -0.22
PHF20-202ENST00000374000 MTIF3Q9H2K0 278 aaKnown RBP13.7□□□□□ -0.22
PHF20-202ENST00000374000 PAG1Q9NWQ8 432 aa13.7□□□□□ -0.22
PHF20-202ENST00000374000 SLC4A4Q9Y6R1 1079 aa13.7□□□□□ -0.22
PHF20-202ENST00000374000 DDX49Q9Y6V7 483 aaKnown RBP13.7□□□□□ -0.22
PHF20-202ENST00000374000 RASA1P20936 1047 aa13.69□□□□□ -0.22
PHF20-202ENST00000374000 ITGA7Q13683 1181 aa13.69□□□□□ -0.22
PHF20-202ENST00000374000 STK11IPQ8N1F8 1099 aa13.69□□□□□ -0.22
PHF20-202ENST00000374000 ANKRD35Q8N283 1001 aa13.69□□□□□ -0.22
PHF20-202ENST00000374000 KIFC2Q96AC6 838 aa13.69□□□□□ -0.22
PHF20-202ENST00000374000 TSPYL2Q9H2G4 693 aaPredicted RBP13.69□□□□□ -0.22
PHF20-202ENST00000374000 BOLA2Q9H3K6 86 aa13.69□□□□□ -0.22
PHF20-202ENST00000374000 EPOPA6NHQ4 379 aa13.69□□□□□ -0.22
PHF20-202ENST00000374000 B4GALT4O60513 344 aa13.69□□□□□ -0.22
PHF20-202ENST00000374000 ZBED4O75132 1171 aa13.69□□□□□ -0.22
PHF20-202ENST00000374000 PSMC6P62333 389 aa13.69□□□□□ -0.22
PHF20-202ENST00000374000 TMEM63BQ5T3F8 832 aa13.69□□□□□ -0.22
PHF20-202ENST00000374000 AMOTL1Q8IY63 956 aa13.69□□□□□ -0.22
PHF20-202ENST00000374000 SCLYQ96I15 445 aa13.69□□□□□ -0.22
PHF20-202ENST00000374000 LRFN3Q9BTN0 628 aa13.69□□□□□ -0.22
PHF20-202ENST00000374000 SLC38A10Q9HBR0 1119 aa13.69□□□□□ -0.22
PHF20-202ENST00000374000 NYAP2Q9P242 653 aa13.69□□□□□ -0.22
PHF20-202ENST00000374000 GNEQ9Y223 722 aaKnown RBP13.69□□□□□ -0.22
PHF20-202ENST00000374000 PCDHA11Q9Y5I1 949 aa13.69□□□□□ -0.22
PHF20-202ENST00000374000 SLC4A7Q9Y6M7 1214 aa13.69□□□□□ -0.22
PHF20-202ENST00000374000 XIRP2A4UGR9 3374 aa13.68□□□□□ -0.22
PHF20-202ENST00000374000 TNFAIP2Q03169 654 aa13.68□□□□□ -0.22
PHF20-202ENST00000374000 KRT40Q6A162 431 aa13.68□□□□□ -0.22
PHF20-202ENST00000374000 CLASRPQ8N2M8 674 aaKnown RBP13.68□□□□□ -0.22
PHF20-202ENST00000374000 AGBL1Q96MI9 1066 aa13.68□□□□□ -0.22
PHF20-202ENST00000374000 PUS7LQ9H0K6 701 aaKnown RBP13.68□□□□□ -0.22
PHF20-202ENST00000374000 MTCH2Q9Y6C9 303 aa13.68□□□□□ -0.22
PHF20-202ENST00000374000 IGKV6D-41A0A0C4DH26 115 aa13.67□□□□□ -0.22
PHF20-202ENST00000374000 SOWAHBA6NEL2 793 aa13.67□□□□□ -0.22
PHF20-202ENST00000374000 ERC2O15083 957 aa13.67□□□□□ -0.22
PHF20-202ENST00000374000 IFIT2P09913 472 aaKnown RBP13.67□□□□□ -0.22
PHF20-202ENST00000374000 TTLL4Q14679 1199 aa13.67□□□□□ -0.22
PHF20-202ENST00000374000 SKIV2LQ15477 1246 aaKnown RBP13.67□□□□□ -0.22
PHF20-202ENST00000374000 NOL8Q76FK4 1167 aaKnown RBP13.67□□□□□ -0.22
PHF20-202ENST00000374000 TLK2Q86UE8 772 aa13.67□□□□□ -0.22
PHF20-202ENST00000374000 FAM133AQ8N9E0 248 aa13.67□□□□□ -0.22
PHF20-202ENST00000374000 CHST13Q8NET6 341 aa13.67□□□□□ -0.22
PHF20-202ENST00000374000 CERS4Q9HA82 394 aa13.67□□□□□ -0.22
PHF20-202ENST00000374000 HOMER2Q9NSB8 354 aa13.67□□□□□ -0.22
PHF20-202ENST00000374000 CLIP2Q9UDT6 1046 aa13.67□□□□□ -0.22
PHF20-202ENST00000374000 ZBBXA8MT70 800 aa13.67□□□□□ -0.22
PHF20-202ENST00000374000 ARHGEF15O94989 841 aa13.67□□□□□ -0.22
PHF20-202ENST00000374000 ATP2A2P16615 1042 aaKnown RBP13.67□□□□□ -0.22
PHF20-202ENST00000374000 SMPD1P17405 629 aa13.67□□□□□ -0.22
PHF20-202ENST00000374000 UBE3CQ15386 1083 aa13.67□□□□□ -0.22
PHF20-202ENST00000374000 FSCN1Q16658 493 aaKnown RBP13.67□□□□□ -0.22
PHF20-202ENST00000374000 HSP90AB4PQ58FF6 505 aa13.67□□□□□ -0.22
PHF20-202ENST00000374000 KHSRPQ92945 711 aaKnown RBP eCLIP13.67□□□□□ -0.221e-7■■■■□ 21.7
PHF20-202ENST00000374000 PDGFCQ9NRA1 345 aa13.67□□□□□ -0.22
PHF20-202ENST00000374000 FBXO40Q9UH90 709 aa13.67□□□□□ -0.22
PHF20-202ENST00000374000 CTDP1Q9Y5B0 961 aaPredicted RBP13.67□□□□□ -0.22
PHF20-202ENST00000374000 DYNC1LI2O43237 492 aaPredicted RBP13.66□□□□□ -0.22
PHF20-202ENST00000374000 CABYRO75952 493 aa13.66□□□□□ -0.22
PHF20-202ENST00000374000 CA3P07451 260 aa13.66□□□□□ -0.22
PHF20-202ENST00000374000 AAK1Q2M2I8 961 aa13.66□□□□□ -0.22
PHF20-202ENST00000374000 KIF1BPQ96EK5 621 aa13.66□□□□□ -0.22
PHF20-202ENST00000374000 DDRGK1Q96HY6 314 aa13.66□□□□□ -0.22
PHF20-202ENST00000374000 HAUS7Q99871 368 aa13.66□□□□□ -0.22
PHF20-202ENST00000374000 ARPP21Q9UBL0 812 aaPredicted RBP13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms