RNA–Protein interactions for RNA: ENST00000372235.7

TMEM53-201, Transcript of transmembrane protein 53, humanhuman

TSL 2 BASIC

Gene TMEM53, Length 890 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-201ENST00000372235 ZNF865P0CJ78 1059 aaPredicted RBP22.24■■□□□ 1.15
TMEM53-201ENST00000372235 LRRC41Q15345 812 aa22.24■■□□□ 1.15
TMEM53-201ENST00000372235 C1orf53Q5VUE5 145 aa22.24■■□□□ 1.15
TMEM53-201ENST00000372235 KCTD1Q719H9 257 aa22.24■■□□□ 1.15
TMEM53-201ENST00000372235 IQCA1Q86XH1 822 aa22.24■■□□□ 1.15
TMEM53-201ENST00000372235 PRR12Q9ULL5 1215 aa22.24■■□□□ 1.15
TMEM53-201ENST00000372235 ASB14A6NK59 587 aa22.23■■□□□ 1.15
TMEM53-201ENST00000372235 MYCNP04198 464 aaPredicted RBP22.23■■□□□ 1.15
TMEM53-201ENST00000372235 HAND2P61296 217 aa22.23■■□□□ 1.15
TMEM53-201ENST00000372235 IMMTQ16891 758 aaKnown RBP22.23■■□□□ 1.15
TMEM53-201ENST00000372235 BTNL9Q6UXG8 535 aa22.23■■□□□ 1.15
TMEM53-201ENST00000372235 SLC39A5Q6ZMH5 540 aa22.23■■□□□ 1.15
TMEM53-201ENST00000372235 DGKHQ86XP1 1220 aa22.23■■□□□ 1.15
TMEM53-201ENST00000372235 LBHD1Q9BQE6 289 aaPredicted RBP22.23■■□□□ 1.15
TMEM53-201ENST00000372235 TMEM47Q9BQJ4 181 aa22.23■■□□□ 1.15
TMEM53-201ENST00000372235 TSEN34Q9BSV6 310 aaKnown RBP22.23■■□□□ 1.15
TMEM53-201ENST00000372235 SPC25Q9HBM1 224 aa22.23■■□□□ 1.15
TMEM53-201ENST00000372235 RNF146Q9NTX7 359 aa22.23■■□□□ 1.15
TMEM53-201ENST00000372235 POTEB2H3BUK9 544 aa22.22■■□□□ 1.15
TMEM53-201ENST00000372235 SYN1P17600 705 aa22.22■■□□□ 1.15
TMEM53-201ENST00000372235 ANO1Q5XXA6 986 aa22.22■■□□□ 1.15
TMEM53-201ENST00000372235 RUFY2Q8WXA3 655 aa22.22■■□□□ 1.15
TMEM53-201ENST00000372235 TRERF1Q96PN7 1200 aa22.22■■□□□ 1.15
TMEM53-201ENST00000372235 HOMER2Q9NSB8 354 aa22.22■■□□□ 1.15
TMEM53-201ENST00000372235 DUSP11O75319 330 aaKnown RBP22.21■■□□□ 1.15
TMEM53-201ENST00000372235 ICAM1P05362 532 aa22.21■■□□□ 1.15
TMEM53-201ENST00000372235 MAGEA10P43363 369 aaPredicted RBP22.21■■□□□ 1.15
TMEM53-201ENST00000372235 ATN1P54259 1190 aaPredicted RBP22.21■■□□□ 1.15
TMEM53-201ENST00000372235 ACVR2BQ13705 512 aa22.21■■□□□ 1.15
TMEM53-201ENST00000372235 SNX17Q15036 470 aa22.21■■□□□ 1.15
TMEM53-201ENST00000372235 GPATCH4Q5T3I0 446 aaKnown RBP22.21■■□□□ 1.15
TMEM53-201ENST00000372235 NUP133Q8WUM0 1156 aa22.21■■□□□ 1.15
TMEM53-201ENST00000372235 UBE2OQ9C0C9 1292 aaKnown RBP22.21■■□□□ 1.15
TMEM53-201ENST00000372235 CNNM2Q9H8M5 875 aa22.21■■□□□ 1.15
TMEM53-201ENST00000372235 CDKN2AIPQ9NXV6 580 aaPredicted RBP22.21■■□□□ 1.15
TMEM53-201ENST00000372235 ZHX1Q9UKY1 873 aaPredicted RBP22.21■■□□□ 1.15
TMEM53-201ENST00000372235 PHF24Q9UPV7 400 aa22.21■■□□□ 1.15
TMEM53-201ENST00000372235 ZNF536O15090 1300 aa22.21■■□□□ 1.15
TMEM53-201ENST00000372235 LOC102724159A0A0B4J2E5 919 aa22.2■■□□□ 1.14
TMEM53-201ENST00000372235 MOXD2PA6NHM9 499 aa22.2■■□□□ 1.14
TMEM53-201ENST00000372235 SNAI1O95863 264 aaPredicted RBP22.2■■□□□ 1.14
TMEM53-201ENST00000372235 ALAS1P13196 640 aa22.2■■□□□ 1.14
TMEM53-201ENST00000372235 RTP1P59025 263 aa22.2■■□□□ 1.14
TMEM53-201ENST00000372235 PWP2Q15269 919 aaKnown RBP22.2■■□□□ 1.14
TMEM53-201ENST00000372235 TDHQ8IZJ6 230 aa22.2■■□□□ 1.14
TMEM53-201ENST00000372235 AGBL1Q96MI9 1066 aa22.2■■□□□ 1.14
TMEM53-201ENST00000372235 KRT23Q9C075 422 aa22.2■■□□□ 1.14
TMEM53-201ENST00000372235 RANBP17Q9H2T7 1088 aaKnown RBP22.2■■□□□ 1.14
TMEM53-201ENST00000372235 CCPG1Q9ULG6 757 aa22.2■■□□□ 1.14
TMEM53-201ENST00000372235 MTMR7Q9Y216 660 aa22.2■■□□□ 1.14
TMEM53-201ENST00000372235 TACC3Q9Y6A5 838 aa22.2■■□□□ 1.14
TMEM53-201ENST00000372235 RAD50Q92878 1312 aa22.2■■□□□ 1.14
TMEM53-201ENST00000372235 ADCYAP1R1P41586 468 aa22.19■■□□□ 1.14
TMEM53-201ENST00000372235 SYDE2Q5VT97 1194 aa22.19■■□□□ 1.14
TMEM53-201ENST00000372235 GPR153Q6NV75 609 aa22.19■■□□□ 1.14
TMEM53-201ENST00000372235 CCDC174Q6PII3 467 aa22.19■■□□□ 1.14
TMEM53-201ENST00000372235 ARMCX2Q7L311 632 aa22.19■■□□□ 1.14
TMEM53-201ENST00000372235 FAM133AQ8N9E0 248 aa22.19■■□□□ 1.14
TMEM53-201ENST00000372235 PCSK9Q8NBP7 692 aaKnown RBP22.19■■□□□ 1.14
TMEM53-201ENST00000372235 A1CFQ9NQ94 594 aaKnown RBP22.19■■□□□ 1.14
TMEM53-201ENST00000372235 ATP11BQ9Y2G3 1177 aa22.19■■□□□ 1.14
TMEM53-201ENST00000372235 CEP290O15078 2479 aa22.19■■□□□ 1.14
TMEM53-201ENST00000372235 PDHBP11177 359 aa22.18■■□□□ 1.14
TMEM53-201ENST00000372235 TAL1P17542 331 aaPredicted RBP22.18■■□□□ 1.14
TMEM53-201ENST00000372235 TTC22Q5TAA0 569 aa22.18■■□□□ 1.14
TMEM53-201ENST00000372235 TBC1D10CQ8IV04 446 aa22.18■■□□□ 1.14
TMEM53-201ENST00000372235 MPHOSPH6Q99547 160 aaKnown RBP22.18■■□□□ 1.14
TMEM53-201ENST00000372235 MAF1Q9H063 256 aa22.18■■□□□ 1.14
TMEM53-201ENST00000372235 ADD3Q9UEY8 706 aaKnown RBP22.18■■□□□ 1.14
TMEM53-201ENST00000372235 PGK1P00558 417 aa22.17■■□□□ 1.14
TMEM53-201ENST00000372235 LRIT3Q3SXY7 679 aa22.17■■□□□ 1.14
TMEM53-201ENST00000372235 CCDC144CPQ8IYA2 1237 aa22.17■■□□□ 1.14
TMEM53-201ENST00000372235 ADAMTS4O75173 837 aa22.16■■□□□ 1.14
TMEM53-201ENST00000372235 SNHG28P0DPA3 235 aa22.16■■□□□ 1.14
TMEM53-201ENST00000372235 CST5P28325 142 aaPredicted RBP22.16■■□□□ 1.14
TMEM53-201ENST00000372235 ZNF543Q08ER8 600 aa22.16■■□□□ 1.14
TMEM53-201ENST00000372235 ANKS1AQ92625 1134 aa22.16■■□□□ 1.14
TMEM53-201ENST00000372235 KAT14Q9H8E8 782 aa22.16■■□□□ 1.14
TMEM53-201ENST00000372235 CYP39A1Q9NYL5 469 aa22.16■■□□□ 1.14
TMEM53-201ENST00000372235 MROH7Q68CQ1 1323 aa22.15■■□□□ 1.14
TMEM53-201ENST00000372235 WDR19Q8NEZ3 1342 aa22.15■■□□□ 1.14
TMEM53-201ENST00000372235 SYNRGQ9UMZ2 1314 aa22.15■■□□□ 1.14
TMEM53-201ENST00000372235 B4DLN1 442 aa22.15■■□□□ 1.14
TMEM53-201ENST00000372235 KDM4AO75164 1064 aa22.15■■□□□ 1.14
TMEM53-201ENST00000372235 MRPL12P52815 198 aaKnown RBP22.15■■□□□ 1.14
TMEM53-201ENST00000372235 CCDC144BQ3MJ40 725 aa22.15■■□□□ 1.14
TMEM53-201ENST00000372235 FERMT2Q96AC1 680 aa22.15■■□□□ 1.14
TMEM53-201ENST00000372235 CHMP4CQ96CF2 233 aa22.15■■□□□ 1.14
TMEM53-201ENST00000372235 GPCPD1Q9NPB8 672 aa22.15■■□□□ 1.14
TMEM53-201ENST00000372235 NEDD4P46934 1319 aa22.14■■□□□ 1.14
TMEM53-201ENST00000372235 FRMPD2Q68DX3 1309 aaPredicted RBP22.14■■□□□ 1.14
TMEM53-201ENST00000372235 A0A1W2PQ45 241 aaPredicted RBP22.14■■□□□ 1.13
TMEM53-201ENST00000372235 A0A1W2PQY0 241 aa22.14■■□□□ 1.13
TMEM53-201ENST00000372235 SLC16A2P36021 539 aa22.14■■□□□ 1.13
TMEM53-201ENST00000372235 ACLYP53396 1101 aa22.14■■□□□ 1.13
TMEM53-201ENST00000372235 CNTN2Q02246 1040 aa22.14■■□□□ 1.13
TMEM53-201ENST00000372235 TRDNQ13061 729 aa22.14■■□□□ 1.13
TMEM53-201ENST00000372235 TRIM60Q495X7 471 aa22.14■■□□□ 1.13
TMEM53-201ENST00000372235 NSMFQ6X4W1 530 aa22.14■■□□□ 1.13
TMEM53-201ENST00000372235 KLHDC9Q8NEP7 349 aa22.14■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms