RNA–Protein interactions for RNA: ENST00000370022.9

PRPF38B-202, Transcript of pre-mRNA processing factor 38B, humanhuman

TSL 1 (best) BASIC

Gene PRPF38B, Length 1,591 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38B-202ENST00000370022 CCAR1Q8IX12 1150 aaKnown RBP18.04■□□□□ 0.48
PRPF38B-202ENST00000370022 MTMR8Q96EF0 704 aa18.04■□□□□ 0.48
PRPF38B-202ENST00000370022 SLKQ9H2G2 1235 aaPredicted RBP18.04■□□□□ 0.48
PRPF38B-202ENST00000370022 CPVLQ9H3G5 476 aa18.04■□□□□ 0.48
PRPF38B-202ENST00000370022 FAM217BQ9NTX9 383 aaPredicted RBP18.04■□□□□ 0.48
PRPF38B-202ENST00000370022 LIMCH1Q9UPQ0 1083 aa18.04■□□□□ 0.48
PRPF38B-202ENST00000370022 CYTH3O43739 400 aa18.03■□□□□ 0.48
PRPF38B-202ENST00000370022 PLEKHA8P1O95397 391 aa18.03■□□□□ 0.48
PRPF38B-202ENST00000370022 CDC27P30260 824 aa18.03■□□□□ 0.48
PRPF38B-202ENST00000370022 SNRNP48Q6IEG0 339 aaKnown RBP18.03■□□□□ 0.48
PRPF38B-202ENST00000370022 CPXCR1Q8N123 301 aa18.03■□□□□ 0.48
PRPF38B-202ENST00000370022 SRBD1Q8N5C6 995 aaKnown RBP18.03■□□□□ 0.48
PRPF38B-202ENST00000370022 MOV10L1Q9BXT6 1211 aaKnown RBP18.03■□□□□ 0.48
PRPF38B-202ENST00000370022 MROH8Q9H579 483 aa18.03■□□□□ 0.48
PRPF38B-202ENST00000370022 RAVER2Q9HCJ3 691 aaKnown RBP18.03■□□□□ 0.48
PRPF38B-202ENST00000370022 VAT1LQ9HCJ6 419 aa18.03■□□□□ 0.48
PRPF38B-202ENST00000370022 ZNF536O15090 1300 aa18.03■□□□□ 0.48
PRPF38B-202ENST00000370022 ZBTB5O15062 677 aa18.02■□□□□ 0.48
PRPF38B-202ENST00000370022 PFKFB2O60825 505 aa18.02■□□□□ 0.48
PRPF38B-202ENST00000370022 GNRH1P01148 92 aa18.02■□□□□ 0.48
PRPF38B-202ENST00000370022 FCGRTP55899 365 aa18.02■□□□□ 0.48
PRPF38B-202ENST00000370022 TKFCQ3LXA3 575 aa18.02■□□□□ 0.48
PRPF38B-202ENST00000370022 CCDC174Q6PII3 467 aa18.02■□□□□ 0.48
PRPF38B-202ENST00000370022 CPLX2Q6PUV4 134 aaKnown RBP18.02■□□□□ 0.48
PRPF38B-202ENST00000370022 NBPF11Q86T75 865 aa18.02■□□□□ 0.48
PRPF38B-202ENST00000370022 RRP36Q96EU6 259 aaKnown RBP18.02■□□□□ 0.48
PRPF38B-202ENST00000370022 ZSCAN31Q96LW9 406 aaPredicted RBP18.02■□□□□ 0.48
PRPF38B-202ENST00000370022 LARP6Q9BRS8 491 aaKnown RBP18.02■□□□□ 0.48
PRPF38B-202ENST00000370022 PNMA6FA0A0J9YX94 578 aa18.01■□□□□ 0.47
PRPF38B-202ENST00000370022 PEX10O60683 326 aa18.01■□□□□ 0.47
PRPF38B-202ENST00000370022 ADD1P35611 737 aaKnown RBP18.01■□□□□ 0.47
PRPF38B-202ENST00000370022 CCT2P78371 535 aaKnown RBP18.01■□□□□ 0.47
PRPF38B-202ENST00000370022 RBM27Q9P2N5 1060 aaKnown RBP18.01■□□□□ 0.47
PRPF38B-202ENST00000370022 SEC63Q9UGP8 760 aaKnown RBP18.01■□□□□ 0.47
PRPF38B-202ENST00000370022 FBXO40Q9UH90 709 aa18.01■□□□□ 0.47
PRPF38B-202ENST00000370022 CCPG1Q9ULG6 757 aa18.01■□□□□ 0.47
PRPF38B-202ENST00000370022 CPLX1O14810 134 aa18■□□□□ 0.47
PRPF38B-202ENST00000370022 ERCC3P19447 782 aa18■□□□□ 0.47
PRPF38B-202ENST00000370022 LBX1P52954 281 aa18■□□□□ 0.47
PRPF38B-202ENST00000370022 SNAP25P60880 206 aa18■□□□□ 0.47
PRPF38B-202ENST00000370022 STK3Q13188 491 aa18■□□□□ 0.47
PRPF38B-202ENST00000370022 ME3Q16798 604 aa18■□□□□ 0.47
PRPF38B-202ENST00000370022 SLC35G1Q2M3R5 365 aa18■□□□□ 0.47
PRPF38B-202ENST00000370022 QRICH1Q2TAL8 776 aa18■□□□□ 0.47
PRPF38B-202ENST00000370022 NOL8Q76FK4 1167 aaKnown RBP18■□□□□ 0.47
PRPF38B-202ENST00000370022 CHST13Q8NET6 341 aa18■□□□□ 0.47
PRPF38B-202ENST00000370022 PIGSQ96S52 555 aa18■□□□□ 0.47
PRPF38B-202ENST00000370022 AMNQ9BXJ7 453 aa18■□□□□ 0.47
PRPF38B-202ENST00000370022 PORCNQ9H237 461 aa18■□□□□ 0.47
PRPF38B-202ENST00000370022 SH2B1Q9NRF2 756 aaPredicted RBP18■□□□□ 0.47
PRPF38B-202ENST00000370022 COL11A1P12107 1806 aaPredicted RBP18■□□□□ 0.47
PRPF38B-202ENST00000370022 CDKL5O76039 1030 aa18■□□□□ 0.47
PRPF38B-202ENST00000370022 IFNAR1P17181 557 aa18■□□□□ 0.47
PRPF38B-202ENST00000370022 PSMC4P43686 418 aa18■□□□□ 0.47
PRPF38B-202ENST00000370022 FUT2Q10981 343 aa18■□□□□ 0.47
PRPF38B-202ENST00000370022 SCRN1Q12765 414 aa18■□□□□ 0.47
PRPF38B-202ENST00000370022 NCAPG2Q86XI2 1143 aa18■□□□□ 0.47
PRPF38B-202ENST00000370022 FBXO11Q86XK2 927 aa18■□□□□ 0.47
PRPF38B-202ENST00000370022 HOMER1Q86YM7 354 aa18■□□□□ 0.47
PRPF38B-202ENST00000370022 CMTR1Q8N1G2 835 aaKnown RBP18■□□□□ 0.47
PRPF38B-202ENST00000370022 COA7Q96BR5 231 aa18■□□□□ 0.47
PRPF38B-202ENST00000370022 AGBL1Q96MI9 1066 aa18■□□□□ 0.47
PRPF38B-202ENST00000370022 CWC22Q9HCG8 908 aaKnown RBP18■□□□□ 0.47
PRPF38B-202ENST00000370022 CNTNAP5Q8WYK1 1306 aa17.99■□□□□ 0.47
PRPF38B-202ENST00000370022 TNPO2O14787 897 aaKnown RBP17.99■□□□□ 0.47
PRPF38B-202ENST00000370022 STRNO43815 780 aa17.99■□□□□ 0.47
PRPF38B-202ENST00000370022 FMNL1O95466 1100 aaPredicted RBP17.99■□□□□ 0.47
PRPF38B-202ENST00000370022 HOXD10P28358 340 aa17.99■□□□□ 0.47
PRPF38B-202ENST00000370022 NTRK3Q16288 839 aa17.99■□□□□ 0.47
PRPF38B-202ENST00000370022 GPR142Q7Z601 462 aa17.99■□□□□ 0.47
PRPF38B-202ENST00000370022 CCDC82Q8N4S0 544 aa17.99■□□□□ 0.47
PRPF38B-202ENST00000370022 CD99L2Q8TCZ2 262 aa17.99■□□□□ 0.47
PRPF38B-202ENST00000370022 GTF3C6Q969F1 213 aa17.99■□□□□ 0.47
PRPF38B-202ENST00000370022 MAF1Q9H063 256 aa17.99■□□□□ 0.47
PRPF38B-202ENST00000370022 EFCC1Q9HA90 598 aa17.99■□□□□ 0.47
PRPF38B-202ENST00000370022 NCOA5Q9HCD5 579 aaKnown RBP17.99■□□□□ 0.47
PRPF38B-202ENST00000370022 PRDM10Q9NQV6 1147 aa17.99■□□□□ 0.47
PRPF38B-202ENST00000370022 IVNS1ABPQ9Y6Y0 642 aa17.99■□□□□ 0.47
PRPF38B-202ENST00000370022 DHX30Q7L2E3 1194 aaKnown RBP eCLIP17.98■□□□□ 0.47
PRPF38B-202ENST00000370022 PLEKHH3Q7Z736 793 aa17.98■□□□□ 0.47
PRPF38B-202ENST00000370022 TRIM22Q8IYM9 498 aa17.98■□□□□ 0.47
PRPF38B-202ENST00000370022 ABRAQ8N0Z2 381 aa17.98■□□□□ 0.47
PRPF38B-202ENST00000370022 TRIM47Q96LD4 638 aa17.98■□□□□ 0.47
PRPF38B-202ENST00000370022 TRERF1Q96PN7 1200 aa17.98■□□□□ 0.47
PRPF38B-202ENST00000370022 RNF26Q9BY78 433 aaPredicted RBP17.98■□□□□ 0.47
PRPF38B-202ENST00000370022 ACAD9Q9H845 621 aa17.98■□□□□ 0.47
PRPF38B-202ENST00000370022 RIPK3Q9Y572 518 aa17.98■□□□□ 0.47
PRPF38B-202ENST00000370022 ABCB11O95342 1321 aa17.98■□□□□ 0.47
PRPF38B-202ENST00000370022 hCG_1984214I3L0E3 225 aa17.97■□□□□ 0.47
PRPF38B-202ENST00000370022 PRPF3O43395 683 aaKnown RBP17.97■□□□□ 0.47
PRPF38B-202ENST00000370022 LARGE1O95461 756 aa17.97■□□□□ 0.47
PRPF38B-202ENST00000370022 ALAS1P13196 640 aa17.97■□□□□ 0.47
PRPF38B-202ENST00000370022 SLC4A3P48751 1232 aa17.97■□□□□ 0.47
PRPF38B-202ENST00000370022 PRMT2P55345 433 aa17.97■□□□□ 0.47
PRPF38B-202ENST00000370022 AKAP17AQ02040 695 aaKnown RBP17.97■□□□□ 0.47
PRPF38B-202ENST00000370022 WDR78Q5VTH9 848 aa17.97■□□□□ 0.47
PRPF38B-202ENST00000370022 ZNF713Q8N859 430 aaPredicted RBP17.97■□□□□ 0.47
PRPF38B-202ENST00000370022 SOCS4Q8WXH5 440 aa17.97■□□□□ 0.47
PRPF38B-202ENST00000370022 ARHGAP39Q9C0H5 1083 aa17.97■□□□□ 0.47
PRPF38B-202ENST00000370022 RNF146Q9NTX7 359 aa17.97■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms