RNA–Protein interactions for RNA: ENST00000369733.7

COL17A1-202, Transcript of collagen type XVII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL17A1, Length 5,488 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-202ENST00000369733 ANKRD65E5RJM6 399 aa17.51■□□□□ 0.39
COL17A1-202ENST00000369733 I3L4J1 428 aa17.51■□□□□ 0.39
COL17A1-202ENST00000369733 MMP1P03956 469 aa17.51■□□□□ 0.39
COL17A1-202ENST00000369733 H2AFZP0C0S5 128 aa17.51■□□□□ 0.39
COL17A1-202ENST00000369733 TROVE2P10155 538 aaKnown RBP eCLIP17.51■□□□□ 0.39
COL17A1-202ENST00000369733 ADORA1P30542 326 aa17.51■□□□□ 0.39
COL17A1-202ENST00000369733 CXCR5P32302 372 aa17.51■□□□□ 0.39
COL17A1-202ENST00000369733 IRX5P78411 483 aaPredicted RBP17.51■□□□□ 0.39
COL17A1-202ENST00000369733 H2AFVQ71UI9 128 aa17.51■□□□□ 0.39
COL17A1-202ENST00000369733 ARPP21Q9UBL0 812 aaPredicted RBP17.51■□□□□ 0.39
COL17A1-202ENST00000369733 DDAH1O94760 285 aa17.51■□□□□ 0.39
COL17A1-202ENST00000369733 ALS2CLQ60I27 953 aa17.51■□□□□ 0.39
COL17A1-202ENST00000369733 PPP1R21Q6ZMI0 780 aa17.51■□□□□ 0.39
COL17A1-202ENST00000369733 ODF2LQ9ULJ1 636 aa17.51■□□□□ 0.39
COL17A1-202ENST00000369733 TRPM1Q7Z4N2 1603 aa17.51■□□□□ 0.39
COL17A1-202ENST00000369733 MFAP3LO75121 409 aa17.51■□□□□ 0.39
COL17A1-202ENST00000369733 LUC7L3O95232 432 aaKnown RBP17.51■□□□□ 0.39
COL17A1-202ENST00000369733 SMTNP53814 917 aa17.51■□□□□ 0.39
COL17A1-202ENST00000369733 MCTP2Q6DN12 878 aa17.51■□□□□ 0.39
COL17A1-202ENST00000369733 BPIFA3Q9BQP9 254 aa17.51■□□□□ 0.39
COL17A1-202ENST00000369733 ARMCX3Q9UH62 379 aaPredicted RBP17.51■□□□□ 0.39
COL17A1-202ENST00000369733 MOCS3O95396 460 aa17.5■□□□□ 0.39
COL17A1-202ENST00000369733 PANK4Q9NVE7 773 aa17.5■□□□□ 0.39
COL17A1-202ENST00000369733 ZNF526Q8TF50 670 aaPredicted RBP17.5■□□□□ 0.39
COL17A1-202ENST00000369733 DHTKD1Q96HY7 919 aaPredicted RBP17.5■□□□□ 0.39
COL17A1-202ENST00000369733 INTS9Q9NV88 658 aaKnown RBP17.5■□□□□ 0.39
COL17A1-202ENST00000369733 TFCP2L1Q9NZI6 479 aa17.5■□□□□ 0.39
COL17A1-202ENST00000369733 ICE2Q659A1 982 aa17.5■□□□□ 0.39
COL17A1-202ENST00000369733 TTLL7Q6ZT98 887 aa17.5■□□□□ 0.39
COL17A1-202ENST00000369733 FNBP4Q8N3X1 1017 aaPredicted RBP17.5■□□□□ 0.39
COL17A1-202ENST00000369733 RAB3IL1Q8TBN0 382 aa17.5■□□□□ 0.39
COL17A1-202ENST00000369733 CCDC97Q96F63 343 aaPredicted RBP17.5■□□□□ 0.39
COL17A1-202ENST00000369733 PHF23Q9BUL5 403 aaPredicted RBP17.5■□□□□ 0.39
COL17A1-202ENST00000369733 NHEJ1Q9H9Q4 299 aaPredicted RBP17.5■□□□□ 0.39
COL17A1-202ENST00000369733 UGGT1Q9NYU2 1555 aa17.5■□□□□ 0.39
COL17A1-202ENST00000369733 TMEM232C9JQI7 657 aa17.5■□□□□ 0.39
COL17A1-202ENST00000369733 TXNDC9O14530 226 aa17.5■□□□□ 0.39
COL17A1-202ENST00000369733 MAEAQ7L5Y9 396 aa17.5■□□□□ 0.39
COL17A1-202ENST00000369733 ZCCHC17Q9NP64 241 aaKnown RBP17.5■□□□□ 0.39
COL17A1-202ENST00000369733 EIF3CLB5ME19 914 aaKnown RBP17.49■□□□□ 0.39
COL17A1-202ENST00000369733 CCDC14Q49A88 953 aa17.49■□□□□ 0.39
COL17A1-202ENST00000369733 NAA35Q5VZE5 725 aa17.49■□□□□ 0.39
COL17A1-202ENST00000369733 TADA2BQ86TJ2 420 aa17.49■□□□□ 0.39
COL17A1-202ENST00000369733 DHX40Q8IX18 779 aaKnown RBP17.49■□□□□ 0.39
COL17A1-202ENST00000369733 PSMD1Q99460 953 aa17.49■□□□□ 0.39
COL17A1-202ENST00000369733 EIF3CQ99613 913 aaKnown RBP17.49■□□□□ 0.39
COL17A1-202ENST00000369733 NEK8Q86SG6 692 aa17.49■□□□□ 0.39
COL17A1-202ENST00000369733 STAG1Q8WVM7 1258 aa17.49■□□□□ 0.39
COL17A1-202ENST00000369733 RNF26Q9BY78 433 aaPredicted RBP17.49■□□□□ 0.39
COL17A1-202ENST00000369733 PUS3Q9BZE2 481 aaKnown RBP17.49■□□□□ 0.39
COL17A1-202ENST00000369733 MAGEF1Q9HAY2 307 aa17.49■□□□□ 0.39
COL17A1-202ENST00000369733 EXOC7Q9UPT5 735 aa17.49■□□□□ 0.39
COL17A1-202ENST00000369733 NR5A1Q13285 461 aa17.49■□□□□ 0.39
COL17A1-202ENST00000369733 DDB1Q16531 1140 aa17.49■□□□□ 0.39
COL17A1-202ENST00000369733 MMS22LQ6ZRQ5 1243 aa17.49■□□□□ 0.39
COL17A1-202ENST00000369733 SDCCAG8Q86SQ7 713 aaPredicted RBP17.49■□□□□ 0.39
COL17A1-202ENST00000369733 P2RX5Q93086 422 aa17.49■□□□□ 0.39
COL17A1-202ENST00000369733 SASH1O94885 1247 aa17.49■□□□□ 0.39
COL17A1-202ENST00000369733 IFNAR2P48551 515 aa17.49■□□□□ 0.39
COL17A1-202ENST00000369733 DNAJC10Q8IXB1 793 aa17.49■□□□□ 0.39
COL17A1-202ENST00000369733 TCP11Q8WWU5 503 aa17.49■□□□□ 0.39
COL17A1-202ENST00000369733 ZC3H12CQ9C0D7 883 aaKnown RBP17.49■□□□□ 0.39
COL17A1-202ENST00000369733 SRPRBQ9Y5M8 271 aaKnown RBP17.49■□□□□ 0.39
COL17A1-202ENST00000369733 CLGNO14967 610 aa17.48■□□□□ 0.39
COL17A1-202ENST00000369733 SUN1O94901 812 aa17.48■□□□□ 0.39
COL17A1-202ENST00000369733 P3H4Q92791 437 aa17.48■□□□□ 0.39
COL17A1-202ENST00000369733 FAM114A2Q9NRY5 505 aa17.48■□□□□ 0.39
COL17A1-202ENST00000369733 IGSF1Q8N6C5 1336 aa17.48■□□□□ 0.39
COL17A1-202ENST00000369733 SAMD9LQ8IVG5 1584 aa17.48■□□□□ 0.39
COL17A1-202ENST00000369733 SH2B2O14492 632 aaPredicted RBP17.48■□□□□ 0.39
COL17A1-202ENST00000369733 NR1D1P20393 614 aa17.48■□□□□ 0.39
COL17A1-202ENST00000369733 SEPT14Q6ZU15 432 aa17.48■□□□□ 0.39
COL17A1-202ENST00000369733 AIFM3Q96NN9 605 aa17.48■□□□□ 0.39
COL17A1-202ENST00000369733 RIMBP2O15034 1052 aa17.48■□□□□ 0.39
COL17A1-202ENST00000369733 CIAO1O76071 339 aa17.48■□□□□ 0.39
COL17A1-202ENST00000369733 ADCY8P40145 1251 aa17.48■□□□□ 0.39
COL17A1-202ENST00000369733 TRAPPC10P48553 1259 aa17.48■□□□□ 0.39
COL17A1-202ENST00000369733 SLC7A5Q01650 507 aa17.48■□□□□ 0.39
COL17A1-202ENST00000369733 GALNT17Q6IS24 598 aa17.48■□□□□ 0.39
COL17A1-202ENST00000369733 MAPKAPK5Q8IW41 473 aa17.48■□□□□ 0.39
COL17A1-202ENST00000369733 ITIH3Q06033 890 aa17.48■□□□□ 0.39
COL17A1-202ENST00000369733 ADAM9Q13443 819 aa17.48■□□□□ 0.39
COL17A1-202ENST00000369733 RESP18Q5W5W9 173 aa17.48■□□□□ 0.39
COL17A1-202ENST00000369733 FMR1NBQ8N0W7 255 aaPredicted RBP17.48■□□□□ 0.39
COL17A1-202ENST00000369733 PAGE5Q96GU1 130 aa17.48■□□□□ 0.39
COL17A1-202ENST00000369733 EPC1Q9H2F5 836 aa17.48■□□□□ 0.39
COL17A1-202ENST00000369733 ACTR5Q9H9F9 607 aaPredicted RBP17.48■□□□□ 0.39
COL17A1-202ENST00000369733 PHLDB3Q6NSJ2 640 aa17.48■□□□□ 0.39
COL17A1-202ENST00000369733 ANKRD7Q92527 254 aa17.48■□□□□ 0.39
COL17A1-202ENST00000369733 THAP12O43422 761 aa17.47■□□□□ 0.39
COL17A1-202ENST00000369733 ARL1P40616 181 aaPredicted RBP17.47■□□□□ 0.39
COL17A1-202ENST00000369733 TPD52P55327 224 aaPredicted RBP17.47■□□□□ 0.39
COL17A1-202ENST00000369733 AP1ARQ63HQ0 302 aa17.47■□□□□ 0.39
COL17A1-202ENST00000369733 RDH13Q8NBN7 331 aa17.47■□□□□ 0.39
COL17A1-202ENST00000369733 PNMA1Q8ND90 353 aa17.47■□□□□ 0.39
COL17A1-202ENST00000369733 TGFBRAP1Q8WUH2 860 aa17.47■□□□□ 0.39
COL17A1-202ENST00000369733 ZBED6P86452 979 aa17.47■□□□□ 0.39
COL17A1-202ENST00000369733 OSBP2Q969R2 916 aa17.47■□□□□ 0.39
COL17A1-202ENST00000369733 CFAP57Q96MR6 1250 aa17.47■□□□□ 0.39
COL17A1-202ENST00000369733 RNF14Q9UBS8 474 aa17.47■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms