RNA–Protein interactions for RNA: ENST00000368215.7

PTPRK-206, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRK, Length 4,651 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-206ENST00000368215 WDR78Q5VTH9 848 aa9.43□□□□□ -0.9
PTPRK-206ENST00000368215 GALNT17Q6IS24 598 aa9.43□□□□□ -0.9
PTPRK-206ENST00000368215 MAATS1Q7Z4T9 603 aa9.43□□□□□ -0.9
PTPRK-206ENST00000368215 ANKRD13CQ8N6S4 541 aa9.43□□□□□ -0.9
PTPRK-206ENST00000368215 CD209Q9NNX6 404 aa9.43□□□□□ -0.9
PTPRK-206ENST00000368215 DNM2P50570 870 aa9.42□□□□□ -0.9
PTPRK-206ENST00000368215 FMR1Q06787 632 aaKnown RBP eCLIP9.42□□□□□ -0.9
PTPRK-206ENST00000368215 NFIXQ14938 502 aa9.42□□□□□ -0.9
PTPRK-206ENST00000368215 KRT31Q15323 416 aa9.42□□□□□ -0.9
PTPRK-206ENST00000368215 CERKLQ49MI3 558 aaPredicted RBP9.42□□□□□ -0.9
PTPRK-206ENST00000368215 DNAJC21Q5F1R6 531 aaKnown RBP9.42□□□□□ -0.9
PTPRK-206ENST00000368215 ZNF658Q5TYW1 1059 aaPredicted RBP9.42□□□□□ -0.9
PTPRK-206ENST00000368215 TOGARAM2Q6ZUX3 1019 aa9.42□□□□□ -0.9
PTPRK-206ENST00000368215 GPBP1Q86WP2 473 aa9.42□□□□□ -0.9
PTPRK-206ENST00000368215 SEPT12Q8IYM1 358 aa9.42□□□□□ -0.9
PTPRK-206ENST00000368215 CPXCR1Q8N123 301 aa9.42□□□□□ -0.9
PTPRK-206ENST00000368215 IFT81Q8WYA0 676 aa9.42□□□□□ -0.9
PTPRK-206ENST00000368215 SECISBP2LQ93073 1101 aaKnown RBP9.42□□□□□ -0.9
PTPRK-206ENST00000368215 CNOT6LQ96LI5 555 aaKnown RBP9.42□□□□□ -0.9
PTPRK-206ENST00000368215 NUP58Q9BVL2 599 aa9.42□□□□□ -0.9
PTPRK-206ENST00000368215 AGXT2Q9BYV1 514 aa9.42□□□□□ -0.9
PTPRK-206ENST00000368215 GTPBP4Q9BZE4 634 aaKnown RBP9.42□□□□□ -0.9
PTPRK-206ENST00000368215 QTRT2Q9H974 415 aaKnown RBP9.42□□□□□ -0.9
PTPRK-206ENST00000368215 DDX25Q9UHL0 483 aaKnown RBP9.42□□□□□ -0.9
PTPRK-206ENST00000368215 SERPINB13Q9UIV8 391 aa9.42□□□□□ -0.9
PTPRK-206ENST00000368215 PCDHA1Q9Y5I3 950 aa9.42□□□□□ -0.9
PTPRK-206ENST00000368215 NWD1Q149M9 1564 aa9.42□□□□□ -0.9
PTPRK-206ENST00000368215 VIRMAQ69YN4 1812 aaKnown RBP9.42□□□□□ -0.9
PTPRK-206ENST00000368215 ALDH1B1P30837 517 aa9.42□□□□□ -0.9
PTPRK-206ENST00000368215 CYP4A11Q02928 519 aa9.42□□□□□ -0.9
PTPRK-206ENST00000368215 HAUS3Q68CZ6 603 aa9.42□□□□□ -0.9
PTPRK-206ENST00000368215 LRP10Q7Z4F1 713 aa9.42□□□□□ -0.9
PTPRK-206ENST00000368215 CCDC51Q96ER9 411 aa9.42□□□□□ -0.9
PTPRK-206ENST00000368215 BPIFA3Q9BQP9 254 aa9.42□□□□□ -0.9
PTPRK-206ENST00000368215 FAM196BA6NMK8 535 aa9.42□□□□□ -0.9
PTPRK-206ENST00000368215 BBOX1O75936 387 aa9.42□□□□□ -0.9
PTPRK-206ENST00000368215 CCZ1BP86790 482 aa9.42□□□□□ -0.9
PTPRK-206ENST00000368215 CCZ1P86791 482 aaPredicted RBP9.42□□□□□ -0.9
PTPRK-206ENST00000368215 SETQ01105 290 aaPredicted RBP9.42□□□□□ -0.9
PTPRK-206ENST00000368215 SF3B3Q15393 1217 aaKnown RBP9.42□□□□□ -0.9
PTPRK-206ENST00000368215 KMT5BQ4FZB7 885 aa9.42□□□□□ -0.9
PTPRK-206ENST00000368215 ADGRA1Q86SQ6 560 aa9.42□□□□□ -0.9
PTPRK-206ENST00000368215 ZNF579Q8NAF0 562 aaKnown RBP9.42□□□□□ -0.9
PTPRK-206ENST00000368215 USP17L5A8MUK1 530 aa9.41□□□□□ -0.9
PTPRK-206ENST00000368215 GDF11O95390 407 aa9.41□□□□□ -0.9
PTPRK-206ENST00000368215 PTPROQ16827 1216 aa9.41□□□□□ -0.9
PTPRK-206ENST00000368215 SLFN13Q68D06 897 aa9.41□□□□□ -0.9
PTPRK-206ENST00000368215 ILDR1Q86SU0 546 aaPredicted RBP9.41□□□□□ -0.9
PTPRK-206ENST00000368215 IFIH1Q9BYX4 1025 aaKnown RBP9.41□□□□□ -0.9
PTPRK-206ENST00000368215 CCDC113Q9H0I3 377 aa9.41□□□□□ -0.9
PTPRK-206ENST00000368215 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.41□□□□□ -0.9
PTPRK-206ENST00000368215 DISC1Q9NRI5 854 aa9.41□□□□□ -0.9
PTPRK-206ENST00000368215 CALCOCO1Q9P1Z2 691 aa9.41□□□□□ -0.9
PTPRK-206ENST00000368215 DNM3Q9UQ16 869 aa9.41□□□□□ -0.9
PTPRK-206ENST00000368215 KRT13P13646 458 aa9.41□□□□□ -0.9
PTPRK-206ENST00000368215 CAPN2P17655 700 aa9.41□□□□□ -0.9
PTPRK-206ENST00000368215 FGFR2P21802 821 aa9.41□□□□□ -0.9
PTPRK-206ENST00000368215 ICA1Q05084 483 aa9.41□□□□□ -0.9
PTPRK-206ENST00000368215 MYOCDQ8IZQ8 938 aa9.41□□□□□ -0.9
PTPRK-206ENST00000368215 FNBP4Q8N3X1 1017 aaPredicted RBP9.41□□□□□ -0.9
PTPRK-206ENST00000368215 COL5A2P05997 1499 aaPredicted RBP9.41□□□□□ -0.9
PTPRK-206ENST00000368215 EFCAB8A8MWE9 144 aa9.41□□□□□ -0.9
PTPRK-206ENST00000368215 TCP10L2B9ZVM9 353 aa9.41□□□□□ -0.9
PTPRK-206ENST00000368215 PPIP5K2O43314 1243 aa9.41□□□□□ -0.9
PTPRK-206ENST00000368215 SNAP25P60880 206 aa9.41□□□□□ -0.9
PTPRK-206ENST00000368215 IFFO1Q0D2I5 559 aa9.41□□□□□ -0.9
PTPRK-206ENST00000368215 FBXO38Q6PIJ6 1188 aa9.41□□□□□ -0.9
PTPRK-206ENST00000368215 C3orf67Q6ZVT6 689 aa9.41□□□□□ -0.9
PTPRK-206ENST00000368215 HDXQ7Z353 690 aa9.41□□□□□ -0.9
PTPRK-206ENST00000368215 KIFC2Q96AC6 838 aa9.41□□□□□ -0.9
PTPRK-206ENST00000368215 CEP95Q96GE4 821 aa9.41□□□□□ -0.9
PTPRK-206ENST00000368215 FAM107BQ9H098 131 aa9.41□□□□□ -0.9
PTPRK-206ENST00000368215 HOMER2Q9NSB8 354 aa9.41□□□□□ -0.9
PTPRK-206ENST00000368215 KIAA1024Q9UPX6 916 aa9.41□□□□□ -0.9
PTPRK-206ENST00000368215 GCNT3O95395 438 aa9.41□□□□□ -0.9
PTPRK-206ENST00000368215 PPARDQ03181 441 aa9.41□□□□□ -0.9
PTPRK-206ENST00000368215 LARGE2Q8N3Y3 721 aa9.41□□□□□ -0.9
PTPRK-206ENST00000368215 LARP4BQ92615 738 aaKnown RBP9.41□□□□□ -0.9
PTPRK-206ENST00000368215 IL17RAQ96F46 866 aa9.41□□□□□ -0.9
PTPRK-206ENST00000368215 BICD1Q96G01 975 aa9.41□□□□□ -0.9
PTPRK-206ENST00000368215 TMEM110-MUSTN1A8MSY1 372 aa9.4□□□□□ -0.9
PTPRK-206ENST00000368215 SMIM22K7EJ46 135 aa9.4□□□□□ -0.9
PTPRK-206ENST00000368215 TTLL1O95922 423 aa9.4□□□□□ -0.9
PTPRK-206ENST00000368215 GPSM2P81274 684 aa9.4□□□□□ -0.9
PTPRK-206ENST00000368215 TRAF1Q13077 416 aa9.4□□□□□ -0.9
PTPRK-206ENST00000368215 E4F1Q66K89 784 aaPredicted RBP9.4□□□□□ -0.9
PTPRK-206ENST00000368215 CCDC84Q86UT8 332 aaPredicted RBP9.4□□□□□ -0.9
PTPRK-206ENST00000368215 TPH2Q8IWU9 490 aa9.4□□□□□ -0.9
PTPRK-206ENST00000368215 GPR161Q8N6U8 529 aaKnown RBP9.4□□□□□ -0.9
PTPRK-206ENST00000368215 CTNNBL1Q8WYA6 563 aaPredicted RBP9.4□□□□□ -0.9
PTPRK-206ENST00000368215 TBC1D5Q92609 795 aa9.4□□□□□ -0.9
PTPRK-206ENST00000368215 MTA3Q9BTC8 594 aa9.4□□□□□ -0.9
PTPRK-206ENST00000368215 RWDD2AQ9UIY3 292 aa9.4□□□□□ -0.9
PTPRK-206ENST00000368215 PCDHB13Q9Y5F0 798 aa9.4□□□□□ -0.9
PTPRK-206ENST00000368215 NFAT5O94916 1531 aa9.4□□□□□ -0.9
PTPRK-206ENST00000368215 KIAA0754O94854 1291 aa9.4□□□□□ -0.9
PTPRK-206ENST00000368215 RPL13P26373 211 aaKnown RBP9.4□□□□□ -0.9
PTPRK-206ENST00000368215 PRCPP42785 496 aa9.4□□□□□ -0.9
PTPRK-206ENST00000368215 MTF1Q14872 753 aa9.4□□□□□ -0.9
PTPRK-206ENST00000368215 PTPAQ15257 358 aa9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms