RNA–Protein interactions for RNA: ENST00000368213.9

PTPRK-205, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRK, Length 5,816 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-205ENST00000368213 SEL1L2Q5TEA6 688 aa11.91□□□□□ -0.5
PTPRK-205ENST00000368213 C16orf45Q96MC5 204 aaPredicted RBP11.91□□□□□ -0.5
PTPRK-205ENST00000368213 FAM204AQ9H8W3 233 aa11.91□□□□□ -0.5
PTPRK-205ENST00000368213 RIPOR2Q9Y4F9 1068 aa11.91□□□□□ -0.5
PTPRK-205ENST00000368213 STK25O00506 426 aa11.91□□□□□ -0.5
PTPRK-205ENST00000368213 PRDX5P30044 214 aa11.91□□□□□ -0.5
PTPRK-205ENST00000368213 FAM83BQ5T0W9 1011 aa11.91□□□□□ -0.5
PTPRK-205ENST00000368213 NACC1Q96RE7 527 aa11.91□□□□□ -0.5
PTPRK-205ENST00000368213 MTFR1LQ9H019 292 aa11.91□□□□□ -0.5
PTPRK-205ENST00000368213 VPS16Q9H269 839 aa11.91□□□□□ -0.5
PTPRK-205ENST00000368213 DIP2CQ9Y2E4 1556 aa11.91□□□□□ -0.5
PTPRK-205ENST00000368213 IQSEC2Q5JU85 1478 aa11.91□□□□□ -0.5
PTPRK-205ENST00000368213 CEP152O94986 1710 aa11.91□□□□□ -0.5
PTPRK-205ENST00000368213 HUNKP57058 714 aa11.91□□□□□ -0.5
PTPRK-205ENST00000368213 MYL5Q02045 173 aa11.91□□□□□ -0.5
PTPRK-205ENST00000368213 STAMQ92783 540 aa11.91□□□□□ -0.5
PTPRK-205ENST00000368213 PPP1R16BQ96T49 567 aa11.91□□□□□ -0.5
PTPRK-205ENST00000368213 BLZF1Q9H2G9 400 aa11.91□□□□□ -0.5
PTPRK-205ENST00000368213 PRDM5Q9NQX1 630 aaPredicted RBP11.91□□□□□ -0.5
PTPRK-205ENST00000368213 ARPP19P56211 112 aa11.91□□□□□ -0.5
PTPRK-205ENST00000368213 SNAP25P60880 206 aa11.91□□□□□ -0.5
PTPRK-205ENST00000368213 LRMPQ12912 555 aa11.91□□□□□ -0.5
PTPRK-205ENST00000368213 GOLGA5Q8TBA6 731 aa11.91□□□□□ -0.5
PTPRK-205ENST00000368213 WDR11Q9BZH6 1224 aa11.91□□□□□ -0.5
PTPRK-205ENST00000368213 A0A1W2PRG0 241 aa11.9□□□□□ -0.5
PTPRK-205ENST00000368213 CELF2O95319 508 aaKnown RBP11.9□□□□□ -0.5
PTPRK-205ENST00000368213 SNRNP48Q6IEG0 339 aaKnown RBP11.9□□□□□ -0.5
PTPRK-205ENST00000368213 ZBTB33Q86T24 672 aa11.9□□□□□ -0.5
PTPRK-205ENST00000368213 NOSTRINQ8IVI9 506 aa11.9□□□□□ -0.5
PTPRK-205ENST00000368213 JAKMIP2Q96AA8 810 aa11.9□□□□□ -0.5
PTPRK-205ENST00000368213 MMP19Q99542 508 aa11.9□□□□□ -0.5
PTPRK-205ENST00000368213 HESX1Q9UBX0 185 aa11.9□□□□□ -0.5
PTPRK-205ENST00000368213 SYNRGQ9UMZ2 1314 aa11.9□□□□□ -0.5
PTPRK-205ENST00000368213 FAM196BA6NMK8 535 aa11.9□□□□□ -0.5
PTPRK-205ENST00000368213 MARK3P27448 753 aa11.9□□□□□ -0.5
PTPRK-205ENST00000368213 ARMCX5Q6P1M9 558 aa11.9□□□□□ -0.5
PTPRK-205ENST00000368213 TM6SF1Q9BZW5 370 aa11.9□□□□□ -0.5
PTPRK-205ENST00000368213 FAM49AQ9H0Q0 323 aaPredicted RBP11.9□□□□□ -0.5
PTPRK-205ENST00000368213 ZFYVE28Q9HCC9 887 aa11.9□□□□□ -0.5
PTPRK-205ENST00000368213 MTUS1Q9ULD2 1270 aa11.9□□□□□ -0.5
PTPRK-205ENST00000368213 COL4A3BPQ9Y5P4 624 aa11.9□□□□□ -0.5
PTPRK-205ENST00000368213 ARHGEF40Q8TER5 1519 aa11.9□□□□□ -0.5
PTPRK-205ENST00000368213 SETD1BQ9UPS6 1966 aaKnown RBP11.9□□□□□ -0.5
PTPRK-205ENST00000368213 PSAPP07602 524 aa11.9□□□□□ -0.5
PTPRK-205ENST00000368213 CCDC155Q8N6L0 562 aa11.9□□□□□ -0.5
PTPRK-205ENST00000368213 CEP170P1Q96L14 293 aa11.9□□□□□ -0.5
PTPRK-205ENST00000368213 OATP04181 439 aa11.9□□□□□ -0.51
PTPRK-205ENST00000368213 ZNF830Q96NB3 372 aaPredicted RBP11.9□□□□□ -0.51
PTPRK-205ENST00000368213 CCDC77Q9BR77 488 aa11.9□□□□□ -0.51
PTPRK-205ENST00000368213 RAVER2Q9HCJ3 691 aaKnown RBP11.9□□□□□ -0.51
PTPRK-205ENST00000368213 FEM1BQ9UK73 627 aa11.9□□□□□ -0.51
PTPRK-205ENST00000368213 KDM4FA0A1W2PPD8 638 aa11.89□□□□□ -0.51
PTPRK-205ENST00000368213 hCG_1984214I3L0E3 225 aa11.89□□□□□ -0.51
PTPRK-205ENST00000368213 DLATP10515 647 aaKnown RBP11.89□□□□□ -0.51
PTPRK-205ENST00000368213 LMNB1P20700 586 aa11.89□□□□□ -0.51
PTPRK-205ENST00000368213 C8orf34Q49A92 452 aa11.89□□□□□ -0.51
PTPRK-205ENST00000368213 ZNF713Q8N859 430 aaPredicted RBP11.89□□□□□ -0.51
PTPRK-205ENST00000368213 PUS7LQ9H0K6 701 aaKnown RBP11.89□□□□□ -0.51
PTPRK-205ENST00000368213 ZSWIM4Q9H7M6 989 aa11.89□□□□□ -0.51
PTPRK-205ENST00000368213 PANK4Q9NVE7 773 aa11.89□□□□□ -0.51
PTPRK-205ENST00000368213 CCDC175P0C221 793 aa11.89□□□□□ -0.51
PTPRK-205ENST00000368213 PPP1R7Q15435 360 aa11.89□□□□□ -0.51
PTPRK-205ENST00000368213 PDXDC2PQ6P474 469 aa11.89□□□□□ -0.51
PTPRK-205ENST00000368213 CCDC63Q8NA47 563 aa11.89□□□□□ -0.51
PTPRK-205ENST00000368213 USTQ9Y2C2 406 aa11.89□□□□□ -0.51
PTPRK-205ENST00000368213 TTLL3Q9Y4R7 772 aa11.89□□□□□ -0.51
PTPRK-205ENST00000368213 FCER1AP12319 257 aa11.89□□□□□ -0.51
PTPRK-205ENST00000368213 MTERF2Q49AM1 385 aa11.89□□□□□ -0.51
PTPRK-205ENST00000368213 SND1Q7KZF4 910 aaKnown RBP eCLIP11.89□□□□□ -0.515e-6■□□□□ 9.5
PTPRK-205ENST00000368213 POMGNT1Q8WZA1 660 aa11.89□□□□□ -0.51
PTPRK-205ENST00000368213 PGBD1Q96JS3 809 aa11.89□□□□□ -0.51
PTPRK-205ENST00000368213 CPDO75976 1380 aa11.89□□□□□ -0.51
PTPRK-205ENST00000368213 ATP2A2P16615 1042 aaKnown RBP11.89□□□□□ -0.51
PTPRK-205ENST00000368213 NFX1Q12986 1120 aaKnown RBP11.89□□□□□ -0.51
PTPRK-205ENST00000368213 ARHGAP44Q17R89 818 aa11.89□□□□□ -0.51
PTPRK-205ENST00000368213 MTERF4Q7Z6M4 381 aaKnown RBP11.89□□□□□ -0.51
PTPRK-205ENST00000368213 DCAF4Q8WV16 495 aa11.89□□□□□ -0.51
PTPRK-205ENST00000368213 USP31Q70CQ4 1352 aa11.89□□□□□ -0.51
PTPRK-205ENST00000368213 HNRNPDLO14979 420 aaKnown RBP11.89□□□□□ -0.51
PTPRK-205ENST00000368213 ELF1P32519 619 aa11.89□□□□□ -0.51
PTPRK-205ENST00000368213 STXBP2Q15833 593 aa11.89□□□□□ -0.51
PTPRK-205ENST00000368213 STYK1Q6J9G0 422 aa11.89□□□□□ -0.51
PTPRK-205ENST00000368213 LBHD1Q9BQE6 289 aaPredicted RBP11.89□□□□□ -0.51
PTPRK-205ENST00000368213 GGA3Q9NZ52 723 aa11.89□□□□□ -0.51
PTPRK-205ENST00000368213 IFNKQ9P0W0 207 aa11.89□□□□□ -0.51
PTPRK-205ENST00000368213 SNAP23O00161 211 aa11.88□□□□□ -0.51
PTPRK-205ENST00000368213 FAM173BQ6P4H8 233 aa11.88□□□□□ -0.51
PTPRK-205ENST00000368213 SPHKAPQ2M3C7 1700 aa11.88□□□□□ -0.51
PTPRK-205ENST00000368213 TECPR2O15040 1411 aa11.88□□□□□ -0.51
PTPRK-205ENST00000368213 MROH7-TTC4A0A0A0MT08 1334 aa11.88□□□□□ -0.51
PTPRK-205ENST00000368213 SOS2Q07890 1332 aaPredicted RBP11.88□□□□□ -0.51
PTPRK-205ENST00000368213 UBN2Q6ZU65 1347 aa11.88□□□□□ -0.51
PTPRK-205ENST00000368213 DTNBO60941 627 aa11.88□□□□□ -0.51
PTPRK-205ENST00000368213 ECE1P42892 770 aa11.88□□□□□ -0.51
PTPRK-205ENST00000368213 POSTNQ15063 836 aa11.88□□□□□ -0.51
PTPRK-205ENST00000368213 ANGEL2Q5VTE6 544 aaKnown RBP11.88□□□□□ -0.51
PTPRK-205ENST00000368213 C9orf131Q5VYM1 1079 aa11.88□□□□□ -0.51
PTPRK-205ENST00000368213 MYOCDQ8IZQ8 938 aa11.88□□□□□ -0.51
PTPRK-205ENST00000368213 TBC1D16Q8TBP0 767 aa11.88□□□□□ -0.51
PTPRK-205ENST00000368213 GUCA1BQ9UMX6 200 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms