RNA–Protein interactions for RNA: ENST00000368020.5

USF1-202, Transcript of upstream transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USF1, Length 1,717 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-202ENST00000368020 MAP7D2Q96T17 732 aa15.88■□□□□ 0.13
USF1-202ENST00000368020 GTPBP4Q9BZE4 634 aaKnown RBP15.88■□□□□ 0.13
USF1-202ENST00000368020 MAGEF1Q9HAY2 307 aa15.88■□□□□ 0.13
USF1-202ENST00000368020 FOXN1O15353 648 aa15.88■□□□□ 0.13
USF1-202ENST00000368020 CYTH3O43739 400 aa15.88■□□□□ 0.13
USF1-202ENST00000368020 PRR29P0C7W0 189 aa15.88■□□□□ 0.13
USF1-202ENST00000368020 BMP6P22004 513 aa15.88■□□□□ 0.13
USF1-202ENST00000368020 NAPAP54920 295 aa15.88■□□□□ 0.13
USF1-202ENST00000368020 DTHD1Q6ZMT9 781 aa15.88■□□□□ 0.13
USF1-202ENST00000368020 USP49Q70CQ1 688 aa15.88■□□□□ 0.13
USF1-202ENST00000368020 VSTM4Q8IW00 320 aa15.88■□□□□ 0.13
USF1-202ENST00000368020 CTAGE1Q96RT6 745 aa15.88■□□□□ 0.13
USF1-202ENST00000368020 MXD3Q9BW11 206 aa15.88■□□□□ 0.13
USF1-202ENST00000368020 EHD4Q9H223 541 aa15.88■□□□□ 0.13
USF1-202ENST00000368020 CUEDC2Q9H467 287 aa15.88■□□□□ 0.13
USF1-202ENST00000368020 FANCLQ9NW38 375 aa15.88■□□□□ 0.13
USF1-202ENST00000368020 SERPINB13Q9UIV8 391 aa15.88■□□□□ 0.13
USF1-202ENST00000368020 SERPINA10Q9UK55 444 aa15.88■□□□□ 0.13
USF1-202ENST00000368020 PCDHA6Q9UN73 950 aa15.88■□□□□ 0.13
USF1-202ENST00000368020 NFE2L3Q9Y4A8 694 aa15.88■□□□□ 0.13
USF1-202ENST00000368020 PCDHA8Q9Y5H6 950 aa15.88■□□□□ 0.13
USF1-202ENST00000368020 GREB1LQ9C091 1923 aaPredicted RBP15.88■□□□□ 0.13
USF1-202ENST00000368020 GTPBP6O43824 516 aaPredicted RBP15.87■□□□□ 0.13
USF1-202ENST00000368020 ZNF18P17022 549 aa15.87■□□□□ 0.13
USF1-202ENST00000368020 CDK11BP21127 795 aaKnown RBP15.87■□□□□ 0.13
USF1-202ENST00000368020 E2F4Q16254 413 aa15.87■□□□□ 0.13
USF1-202ENST00000368020 PPP1R18Q6NYC8 613 aa15.87■□□□□ 0.13
USF1-202ENST00000368020 CCDC17Q96LX7 622 aa15.87■□□□□ 0.13
USF1-202ENST00000368020 MTMR4Q9NYA4 1195 aa15.87■□□□□ 0.13
USF1-202ENST00000368020 TTLL1O95922 423 aa15.86■□□□□ 0.13
USF1-202ENST00000368020 ATP1A3P13637 1013 aa15.86■□□□□ 0.13
USF1-202ENST00000368020 NONOQ15233 471 aaKnown RBP eCLIP15.86■□□□□ 0.13
USF1-202ENST00000368020 SPATA1Q5VX52 437 aa15.86■□□□□ 0.13
USF1-202ENST00000368020 KIAA0825Q8IV33 1275 aa15.86■□□□□ 0.13
USF1-202ENST00000368020 OGFOD1Q8N543 542 aa15.86■□□□□ 0.13
USF1-202ENST00000368020 C4orf32Q8N8J7 132 aa15.86■□□□□ 0.13
USF1-202ENST00000368020 DPF2Q92785 391 aa15.86■□□□□ 0.13
USF1-202ENST00000368020 ZDHHC15Q96MV8 337 aa15.86■□□□□ 0.13
USF1-202ENST00000368020 DHX36Q9H2U1 1008 aaKnown RBP15.86■□□□□ 0.13
USF1-202ENST00000368020 RIOX1Q9H6W3 641 aa15.86■□□□□ 0.13
USF1-202ENST00000368020 MYH4Q9Y623 1939 aa15.86■□□□□ 0.13
USF1-202ENST00000368020 ZC3H4Q9UPT8 1303 aaKnown RBP15.86■□□□□ 0.13
USF1-202ENST00000368020 A0A087X0B3 334 aa15.85■□□□□ 0.13
USF1-202ENST00000368020 IGKV6D-41A0A0C4DH26 115 aa15.85■□□□□ 0.13
USF1-202ENST00000368020 WNT7AO00755 349 aa15.85■□□□□ 0.13
USF1-202ENST00000368020 RRP9O43818 475 aaKnown RBP15.85■□□□□ 0.13
USF1-202ENST00000368020 NPM3O75607 178 aaKnown RBP15.85■□□□□ 0.13
USF1-202ENST00000368020 TNNT1P13805 278 aa15.85■□□□□ 0.13
USF1-202ENST00000368020 FCHSD1Q86WN1 690 aa15.85■□□□□ 0.13
USF1-202ENST00000368020 CCSER1Q9C0I3 900 aa15.85■□□□□ 0.13
USF1-202ENST00000368020 USP40Q9NVE5 1235 aa15.85■□□□□ 0.13
USF1-202ENST00000368020 RNF181Q9P0P0 153 aa15.85■□□□□ 0.13
USF1-202ENST00000368020 HDAC9Q9UKV0 1011 aa15.85■□□□□ 0.13
USF1-202ENST00000368020 SYNRGQ9UMZ2 1314 aa15.85■□□□□ 0.13
USF1-202ENST00000368020 SNHG28P0DPA3 235 aa15.85■□□□□ 0.13
USF1-202ENST00000368020 PDHBP11177 359 aa15.85■□□□□ 0.13
USF1-202ENST00000368020 AFMP43652 599 aa15.85■□□□□ 0.13
USF1-202ENST00000368020 PTPN14Q15678 1187 aa15.85■□□□□ 0.13
USF1-202ENST00000368020 NOM1Q5C9Z4 860 aaKnown RBP15.85■□□□□ 0.13
USF1-202ENST00000368020 GPATCH4Q5T3I0 446 aaKnown RBP15.85■□□□□ 0.13
USF1-202ENST00000368020 PDXDC2PQ6P474 469 aa15.85■□□□□ 0.13
USF1-202ENST00000368020 GPC2Q8N158 579 aa15.85■□□□□ 0.13
USF1-202ENST00000368020 CCAR2Q8N163 923 aaKnown RBP15.85■□□□□ 0.13
USF1-202ENST00000368020 C16orf45Q96MC5 204 aaPredicted RBP15.85■□□□□ 0.13
USF1-202ENST00000368020 SMCO2A6NFE2 343 aa15.84■□□□□ 0.13
USF1-202ENST00000368020 F8W031 263 aaPredicted RBP15.84■□□□□ 0.13
USF1-202ENST00000368020 VEGFAP15692 232 aaPredicted RBP15.84■□□□□ 0.13
USF1-202ENST00000368020 STAT6P42226 847 aa15.84■□□□□ 0.13
USF1-202ENST00000368020 CRKP46108 304 aa15.84■□□□□ 0.13
USF1-202ENST00000368020 PICALMQ13492 652 aa15.84■□□□□ 0.13
USF1-202ENST00000368020 C9orf131Q5VYM1 1079 aa15.84■□□□□ 0.13
USF1-202ENST00000368020 TYW1BQ6NUM6 668 aa15.84■□□□□ 0.13
USF1-202ENST00000368020 NEK8Q86SG6 692 aa15.84■□□□□ 0.13
USF1-202ENST00000368020 GRAMD1CQ8IYS0 662 aa15.84■□□□□ 0.13
USF1-202ENST00000368020 REXO1Q8N1G1 1221 aaKnown RBP15.84■□□□□ 0.13
USF1-202ENST00000368020 DISC1Q9NRI5 854 aa15.84■□□□□ 0.13
USF1-202ENST00000368020 UBA7P41226 1012 aa15.83■□□□□ 0.13
USF1-202ENST00000368020 SCNN1DP51172 638 aa15.83■□□□□ 0.13
USF1-202ENST00000368020 SPAG1Q07617 926 aa15.83■□□□□ 0.13
USF1-202ENST00000368020 INF2Q27J81 1249 aa15.83■□□□□ 0.13
USF1-202ENST00000368020 SLC35G1Q2M3R5 365 aa15.83■□□□□ 0.13
USF1-202ENST00000368020 SPECC1LQ69YQ0 1117 aa15.83■□□□□ 0.13
USF1-202ENST00000368020 ARMCX5Q6P1M9 558 aa15.83■□□□□ 0.13
USF1-202ENST00000368020 USP17L2Q6R6M4 530 aa15.83■□□□□ 0.13
USF1-202ENST00000368020 MTMR14Q8NCE2 650 aa15.83■□□□□ 0.13
USF1-202ENST00000368020 ANKRD20A12PQ8NF67 263 aa15.83■□□□□ 0.13
USF1-202ENST00000368020 GLT8D2Q9H1C3 349 aa15.83■□□□□ 0.13
USF1-202ENST00000368020 ZBTB12Q9Y330 459 aaPredicted RBP15.83■□□□□ 0.13
USF1-202ENST00000368020 ZNF541Q9H0D2 1346 aa15.83■□□□□ 0.12
USF1-202ENST00000368020 OR52Z1P0C646 297 aa15.82■□□□□ 0.12
USF1-202ENST00000368020 GOLGA8HP0CJ92 632 aa15.82■□□□□ 0.12
USF1-202ENST00000368020 HOXA7P31268 230 aaPredicted RBP15.82■□□□□ 0.12
USF1-202ENST00000368020 ZNF280AP59817 542 aaPredicted RBP15.82■□□□□ 0.12
USF1-202ENST00000368020 FMR1Q06787 632 aaKnown RBP eCLIP15.82■□□□□ 0.12
USF1-202ENST00000368020 CUL4BQ13620 913 aa15.82■□□□□ 0.12
USF1-202ENST00000368020 ARID5BQ14865 1188 aa15.82■□□□□ 0.12
USF1-202ENST00000368020 FILIP1LQ4L180 1135 aa15.82■□□□□ 0.12
USF1-202ENST00000368020 CEP135Q66GS9 1140 aa15.82■□□□□ 0.12
USF1-202ENST00000368020 APOBEC3HQ6NTF7 200 aaKnown RBP15.82■□□□□ 0.12
USF1-202ENST00000368020 CDC42EP5Q6NZY7 148 aa15.82■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms