RNA–Protein interactions for RNA: ENST00000354421.7

C11orf54-202, Transcript of chromosome 11 open reading frame 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C11orf54, Length 1,733 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-202ENST00000354421 PDE4BQ07343 736 aa8.53□□□□□ -1.04
C11orf54-202ENST00000354421 CT47A1Q5JQC4 288 aaPredicted RBP8.53□□□□□ -1.04
C11orf54-202ENST00000354421 BEND6Q5SZJ8 279 aaPredicted RBP8.53□□□□□ -1.04
C11orf54-202ENST00000354421 NT5DC1Q5TFE4 455 aa8.53□□□□□ -1.04
C11orf54-202ENST00000354421 CTR9Q6PD62 1173 aa8.53□□□□□ -1.04
C11orf54-202ENST00000354421 TOGARAM2Q6ZUX3 1019 aa8.53□□□□□ -1.04
C11orf54-202ENST00000354421 HDXQ7Z353 690 aa8.53□□□□□ -1.04
C11orf54-202ENST00000354421 SRLQ86TD4 932 aa8.53□□□□□ -1.04
C11orf54-202ENST00000354421 FOXP4Q8IVH2 680 aaPredicted RBP8.53□□□□□ -1.04
C11orf54-202ENST00000354421 DEFB123Q8N688 67 aa8.53□□□□□ -1.04
C11orf54-202ENST00000354421 TRIML1Q8N9V2 468 aa8.53□□□□□ -1.04
C11orf54-202ENST00000354421 MLKLQ8NB16 471 aa8.53□□□□□ -1.04
C11orf54-202ENST00000354421 NCOA7Q8NI08 942 aa8.53□□□□□ -1.04
C11orf54-202ENST00000354421 OSBP2Q969R2 916 aa8.53□□□□□ -1.04
C11orf54-202ENST00000354421 CCDC34Q96HJ3 373 aa8.53□□□□□ -1.04
C11orf54-202ENST00000354421 NAA15Q9BXJ9 866 aaKnown RBP8.53□□□□□ -1.04
C11orf54-202ENST00000354421 RAI14Q9P0K7 980 aa8.53□□□□□ -1.04
C11orf54-202ENST00000354421 HOOK1Q9UJC3 728 aaKnown RBP8.53□□□□□ -1.04
C11orf54-202ENST00000354421 MAN1B1Q9UKM7 699 aa8.53□□□□□ -1.04
C11orf54-202ENST00000354421 PCDHA5Q9Y5H7 936 aa8.53□□□□□ -1.04
C11orf54-202ENST00000354421 A0A087WZG4 1122 aa8.52□□□□□ -1.05
C11orf54-202ENST00000354421 ERLIN1O75477 346 aa8.52□□□□□ -1.05
C11orf54-202ENST00000354421 EIF3JO75822 258 aaKnown RBP8.52□□□□□ -1.05
C11orf54-202ENST00000354421 CDKL5O76039 1030 aa8.52□□□□□ -1.05
C11orf54-202ENST00000354421 CIAO1O76071 339 aa8.52□□□□□ -1.05
C11orf54-202ENST00000354421 TUBBP07437 444 aa8.52□□□□□ -1.05
C11orf54-202ENST00000354421 MMP10P09238 476 aa8.52□□□□□ -1.05
C11orf54-202ENST00000354421 FDX1P10109 184 aa8.52□□□□□ -1.05
C11orf54-202ENST00000354421 MYL6BP14649 208 aa8.52□□□□□ -1.05
C11orf54-202ENST00000354421 BMP6P22004 513 aa8.52□□□□□ -1.05
C11orf54-202ENST00000354421 VARSP26640 1264 aaKnown RBP8.52□□□□□ -1.05
C11orf54-202ENST00000354421 LMAN1P49257 510 aa8.52□□□□□ -1.05
C11orf54-202ENST00000354421 SARSP49591 514 aaKnown RBP8.52□□□□□ -1.05
C11orf54-202ENST00000354421 CHMP4BP1P59074 171 aa8.52□□□□□ -1.05
C11orf54-202ENST00000354421 KRT40Q6A162 431 aa8.52□□□□□ -1.05
C11orf54-202ENST00000354421 LMBR1LQ6UX01 489 aa8.52□□□□□ -1.05
C11orf54-202ENST00000354421 FAM177A1Q8N128 213 aaPredicted RBP8.52□□□□□ -1.05
C11orf54-202ENST00000354421 PLBD2Q8NHP8 589 aa8.52□□□□□ -1.05
C11orf54-202ENST00000354421 ALG1Q9BT22 464 aa8.52□□□□□ -1.05
C11orf54-202ENST00000354421 PRO3102Q9H379 93 aa8.52□□□□□ -1.05
C11orf54-202ENST00000354421 ANKZF1Q9H8Y5 726 aa8.52□□□□□ -1.05
C11orf54-202ENST00000354421 SLC52A2Q9HAB3 445 aa8.52□□□□□ -1.05
C11orf54-202ENST00000354421 FAM217BQ9NTX9 383 aaPredicted RBP8.52□□□□□ -1.05
C11orf54-202ENST00000354421 CDC23Q9UJX2 597 aa8.52□□□□□ -1.05
C11orf54-202ENST00000354421 RRP15Q9Y3B9 282 aaKnown RBP8.52□□□□□ -1.05
C11orf54-202ENST00000354421 ABCC12Q96J65 1359 aa8.52□□□□□ -1.05
C11orf54-202ENST00000354421 AKR1B15C9JRZ8 316 aaPredicted RBP8.51□□□□□ -1.05
C11orf54-202ENST00000354421 SNRPA1P09661 255 aaKnown RBP8.51□□□□□ -1.05
C11orf54-202ENST00000354421 CCDC175P0C221 793 aa8.51□□□□□ -1.05
C11orf54-202ENST00000354421 NOP2P46087 812 aaKnown RBP8.51□□□□□ -1.05
C11orf54-202ENST00000354421 MORC3Q14149 939 aa8.51□□□□□ -1.05
C11orf54-202ENST00000354421 NR1I3Q14994 352 aa8.51□□□□□ -1.05
C11orf54-202ENST00000354421 LONRF3Q496Y0 759 aa8.51□□□□□ -1.05
C11orf54-202ENST00000354421 VPS37DQ86XT2 251 aa8.51□□□□□ -1.05
C11orf54-202ENST00000354421 PDILTQ8N807 584 aa8.51□□□□□ -1.05
C11orf54-202ENST00000354421 CNNM3Q8NE01 707 aa8.51□□□□□ -1.05
C11orf54-202ENST00000354421 CCDC12Q8WUD4 166 aaPredicted RBP8.51□□□□□ -1.05
C11orf54-202ENST00000354421 NEUROD6Q96NK8 337 aa8.51□□□□□ -1.05
C11orf54-202ENST00000354421 GBP3Q9H0R5 595 aa8.51□□□□□ -1.05
C11orf54-202ENST00000354421 MRPL44Q9H9J2 332 aaKnown RBP8.51□□□□□ -1.05
C11orf54-202ENST00000354421 GJB4Q9NTQ9 266 aa8.51□□□□□ -1.05
C11orf54-202ENST00000354421 LCMT1Q9UIC8 334 aa8.51□□□□□ -1.05
C11orf54-202ENST00000354421 KCNH3Q9ULD8 1083 aa8.51□□□□□ -1.05
C11orf54-202ENST00000354421 L1RE1Q9UN81 338 aa8.51□□□□□ -1.05
C11orf54-202ENST00000354421 A0A1B0GTH6 734 aa8.51□□□□□ -1.05
C11orf54-202ENST00000354421 C6orf229H3BNL8 230 aa8.51□□□□□ -1.05
C11orf54-202ENST00000354421 EYA2O00167 538 aa8.51□□□□□ -1.05
C11orf54-202ENST00000354421 FGAP02671 866 aa8.51□□□□□ -1.05
C11orf54-202ENST00000354421 VSIG8P0DPA2 414 aa8.51□□□□□ -1.05
C11orf54-202ENST00000354421 ERCC5P28715 1186 aaPredicted RBP8.51□□□□□ -1.05
C11orf54-202ENST00000354421 CDC27P30260 824 aa8.51□□□□□ -1.05
C11orf54-202ENST00000354421 KARSQ15046 597 aaKnown RBP8.51□□□□□ -1.05
C11orf54-202ENST00000354421 MRPL14Q6P1L8 145 aaKnown RBP8.51□□□□□ -1.05
C11orf54-202ENST00000354421 LEKR1Q6ZMV7 388 aa8.51□□□□□ -1.05
C11orf54-202ENST00000354421 KRI1Q8N9T8 703 aaKnown RBP8.51□□□□□ -1.05
C11orf54-202ENST00000354421 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.51□□□□□ -1.05
C11orf54-202ENST00000354421 UNC93B1Q9H1C4 597 aa8.51□□□□□ -1.05
C11orf54-202ENST00000354421 CCDC87Q9NVE4 849 aa8.51□□□□□ -1.05
C11orf54-202ENST00000354421 EVA1BQ9NVM1 165 aa8.51□□□□□ -1.05
C11orf54-202ENST00000354421 RSPH14Q9UHP6 348 aa8.51□□□□□ -1.05
C11orf54-202ENST00000354421 STK36Q9NRP7 1315 aa8.51□□□□□ -1.05
C11orf54-202ENST00000354421 RANBP2P49792 3224 aaKnown RBP8.51□□□□□ -1.05
C11orf54-202ENST00000354421 TIAM2Q8IVF5 1701 aa8.51□□□□□ -1.05
C11orf54-202ENST00000354421 A0A1W2PPC1 479 aa8.5□□□□□ -1.05
C11orf54-202ENST00000354421 IGHA1P01876 353 aa8.5□□□□□ -1.05
C11orf54-202ENST00000354421 GCP02774 474 aa8.5□□□□□ -1.05
C11orf54-202ENST00000354421 PBX1P40424 430 aa8.5□□□□□ -1.05
C11orf54-202ENST00000354421 PLCD1P51178 756 aa8.5□□□□□ -1.05
C11orf54-202ENST00000354421 ADKP55263 362 aaKnown RBP8.5□□□□□ -1.05
C11orf54-202ENST00000354421 TIMM10P62072 90 aa8.5□□□□□ -1.05
C11orf54-202ENST00000354421 FMR1Q06787 632 aaKnown RBP eCLIP8.5□□□□□ -1.05
C11orf54-202ENST00000354421 SLC39A6Q13433 755 aa8.5□□□□□ -1.05
C11orf54-202ENST00000354421 POSTNQ15063 836 aa8.5□□□□□ -1.05
C11orf54-202ENST00000354421 WHAMMP3Q1A5X7 153 aa8.5□□□□□ -1.05
C11orf54-202ENST00000354421 EAPPQ56P03 285 aaPredicted RBP8.5□□□□□ -1.05
C11orf54-202ENST00000354421 NOM1Q5C9Z4 860 aaKnown RBP8.5□□□□□ -1.05
C11orf54-202ENST00000354421 TTC39AQ5SRH9 613 aa8.5□□□□□ -1.05
C11orf54-202ENST00000354421 MAP1SQ66K74 1059 aaPredicted RBP8.5□□□□□ -1.05
C11orf54-202ENST00000354421 CPLX2Q6PUV4 134 aaKnown RBP8.5□□□□□ -1.05
C11orf54-202ENST00000354421 RALYLQ86SE5 291 aaKnown RBP8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms