RNA–Protein interactions for RNA: ENST00000341394.8

CAPRIN1-201, Transcript of cell cycle associated protein 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CAPRIN1, Length 4,108 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPRIN1-201ENST00000341394 DIS3L2Q8IYB7 885 aaKnown RBP11.74□□□□□ -0.53
CAPRIN1-201ENST00000341394 DYNLL2Q96FJ2 89 aa11.74□□□□□ -0.53
CAPRIN1-201ENST00000341394 PFKFB2O60825 505 aa11.74□□□□□ -0.53
CAPRIN1-201ENST00000341394 CDC27P30260 824 aa11.74□□□□□ -0.53
CAPRIN1-201ENST00000341394 USP8P40818 1118 aa11.74□□□□□ -0.53
CAPRIN1-201ENST00000341394 CCDC122Q5T0U0 273 aa11.74□□□□□ -0.53
CAPRIN1-201ENST00000341394 RBM26Q5T8P6 1007 aaKnown RBP11.74□□□□□ -0.53
CAPRIN1-201ENST00000341394 SALL1Q9NSC2 1324 aa11.74□□□□□ -0.53
CAPRIN1-201ENST00000341394 NEFHP12036 1026 aa11.74□□□□□ -0.53
CAPRIN1-201ENST00000341394 UPF1Q92900 1129 aaKnown RBP eCLIP11.74□□□□□ -0.533e-18■□□□□ 10.1
CAPRIN1-201ENST00000341394 COL4A5P29400 1685 aa11.73□□□□□ -0.53
CAPRIN1-201ENST00000341394 TMEM232C9JQI7 657 aa11.73□□□□□ -0.53
CAPRIN1-201ENST00000341394 MPHOSPH10O00566 681 aaKnown RBP11.73□□□□□ -0.53
CAPRIN1-201ENST00000341394 ATP1A2P50993 1020 aa11.73□□□□□ -0.53
CAPRIN1-201ENST00000341394 SOGA3Q5TF21 947 aa11.73□□□□□ -0.53
CAPRIN1-201ENST00000341394 CATIPQ7Z7H3 387 aa11.73□□□□□ -0.53
CAPRIN1-201ENST00000341394 PPP1R13BQ96KQ4 1090 aa11.73□□□□□ -0.53
CAPRIN1-201ENST00000341394 LY9Q9HBG7 655 aa11.73□□□□□ -0.53
CAPRIN1-201ENST00000341394 VPS54Q9P1Q0 977 aa11.73□□□□□ -0.53
CAPRIN1-201ENST00000341394 MYH15Q9Y2K3 1946 aa11.73□□□□□ -0.53
CAPRIN1-201ENST00000341394 SNED1Q8TER0 1413 aa11.73□□□□□ -0.53
CAPRIN1-201ENST00000341394 NAV1Q8NEY1 1877 aa11.73□□□□□ -0.53
CAPRIN1-201ENST00000341394 ZSCAN20P17040 1043 aaPredicted RBP11.73□□□□□ -0.53
CAPRIN1-201ENST00000341394 TMTC2Q8N394 836 aa11.73□□□□□ -0.53
CAPRIN1-201ENST00000341394 ZNF274Q96GC6 653 aaPredicted RBP11.73□□□□□ -0.53
CAPRIN1-201ENST00000341394 TRIM31Q9BZY9 425 aa11.73□□□□□ -0.53
CAPRIN1-201ENST00000341394 HDAC9Q9UKV0 1011 aa11.73□□□□□ -0.53
CAPRIN1-201ENST00000341394 PCDHA5Q9Y5H7 936 aa11.73□□□□□ -0.53
CAPRIN1-201ENST00000341394 V9GY48 417 aaPredicted RBP11.73□□□□□ -0.53
CAPRIN1-201ENST00000341394 ANKRD62A6NC57 917 aa11.73□□□□□ -0.53
CAPRIN1-201ENST00000341394 SH2B2O14492 632 aaPredicted RBP11.73□□□□□ -0.53
CAPRIN1-201ENST00000341394 PAFAH1B1P43034 410 aa11.73□□□□□ -0.53
CAPRIN1-201ENST00000341394 CACNB3P54284 484 aa11.73□□□□□ -0.53
CAPRIN1-201ENST00000341394 ETF1P62495 437 aaKnown RBP11.73□□□□□ -0.53
CAPRIN1-201ENST00000341394 TFAP4Q01664 338 aa11.73□□□□□ -0.53
CAPRIN1-201ENST00000341394 IFFO1Q0D2I5 559 aa11.73□□□□□ -0.53
CAPRIN1-201ENST00000341394 MYSM1Q5VVJ2 828 aa11.73□□□□□ -0.53
CAPRIN1-201ENST00000341394 PAXIP1Q6ZW49 1069 aaPredicted RBP11.73□□□□□ -0.53
CAPRIN1-201ENST00000341394 CCDC43Q96MW1 224 aaKnown RBP11.73□□□□□ -0.53
CAPRIN1-201ENST00000341394 RTFDC1Q9BY42 306 aaPredicted RBP11.73□□□□□ -0.53
CAPRIN1-201ENST00000341394 MKRN1Q9UHC7 482 aaKnown RBP11.73□□□□□ -0.53
CAPRIN1-201ENST00000341394 DAGLAQ9Y4D2 1042 aa11.73□□□□□ -0.53
CAPRIN1-201ENST00000341394 HLA-DOAP06340 250 aa11.72□□□□□ -0.53
CAPRIN1-201ENST00000341394 LIG3P49916 1009 aa11.72□□□□□ -0.53
CAPRIN1-201ENST00000341394 LLGL1Q15334 1064 aa11.72□□□□□ -0.53
CAPRIN1-201ENST00000341394 SLC44A5Q8NCS7 719 aa11.72□□□□□ -0.53
CAPRIN1-201ENST00000341394 SMARCC2Q8TAQ2 1214 aa11.72□□□□□ -0.53
CAPRIN1-201ENST00000341394 STAG1Q8WVM7 1258 aa11.72□□□□□ -0.53
CAPRIN1-201ENST00000341394 FAM217BQ9NTX9 383 aaPredicted RBP11.72□□□□□ -0.53
CAPRIN1-201ENST00000341394 GJA3Q9Y6H8 435 aa11.72□□□□□ -0.53
CAPRIN1-201ENST00000341394 KRT9P35527 623 aa11.72□□□□□ -0.53
CAPRIN1-201ENST00000341394 GIMAP7Q8NHV1 300 aa11.72□□□□□ -0.53
CAPRIN1-201ENST00000341394 TAOK3Q9H2K8 898 aa11.72□□□□□ -0.53
CAPRIN1-201ENST00000341394 TNKSO95271 1327 aa11.72□□□□□ -0.53
CAPRIN1-201ENST00000341394 ZMYM6O95789 1325 aa11.72□□□□□ -0.53
CAPRIN1-201ENST00000341394 MYH1P12882 1939 aa11.72□□□□□ -0.53
CAPRIN1-201ENST00000341394 AKR1B15C9JRZ8 316 aaPredicted RBP11.72□□□□□ -0.53
CAPRIN1-201ENST00000341394 CAVIN2O95810 425 aa11.72□□□□□ -0.53
CAPRIN1-201ENST00000341394 CRKP46108 304 aa11.72□□□□□ -0.53
CAPRIN1-201ENST00000341394 DDX60LQ5H9U9 1706 aaKnown RBP11.72□□□□□ -0.53
CAPRIN1-201ENST00000341394 STRIP1Q5VSL9 837 aa11.72□□□□□ -0.53
CAPRIN1-201ENST00000341394 KCTD16Q68DU8 428 aa11.72□□□□□ -0.53
CAPRIN1-201ENST00000341394 GOLPH3LQ9H4A5 285 aa11.72□□□□□ -0.53
CAPRIN1-201ENST00000341394 VEZTQ9HBM0 779 aa11.72□□□□□ -0.53
CAPRIN1-201ENST00000341394 TCEAL9Q9UHQ7 104 aa11.72□□□□□ -0.53
CAPRIN1-201ENST00000341394 HEATR3Q7Z4Q2 680 aa11.71□□□□□ -0.53
CAPRIN1-201ENST00000341394 TAF4BQ92750 862 aa11.71□□□□□ -0.53
CAPRIN1-201ENST00000341394 FAM205AQ6ZU69 1335 aa11.71□□□□□ -0.53
CAPRIN1-201ENST00000341394 TRIM75PA6NK02 468 aa11.71□□□□□ -0.53
CAPRIN1-201ENST00000341394 STAT6P42226 847 aa11.71□□□□□ -0.53
CAPRIN1-201ENST00000341394 PLCD1P51178 756 aa11.71□□□□□ -0.53
CAPRIN1-201ENST00000341394 TGFB2P61812 414 aa11.71□□□□□ -0.53
CAPRIN1-201ENST00000341394 TMED8Q6PL24 325 aaPredicted RBP11.71□□□□□ -0.53
CAPRIN1-201ENST00000341394 APOA5Q6Q788 366 aa11.71□□□□□ -0.53
CAPRIN1-201ENST00000341394 C7orf43Q8WVR3 580 aa11.71□□□□□ -0.53
CAPRIN1-201ENST00000341394 DYDC1Q8WWB3 177 aa11.71□□□□□ -0.53
CAPRIN1-201ENST00000341394 SCLT1Q96NL6 688 aa11.71□□□□□ -0.53
CAPRIN1-201ENST00000341394 GBP3Q9H0R5 595 aa11.71□□□□□ -0.53
CAPRIN1-201ENST00000341394 KAT14Q9H8E8 782 aa11.71□□□□□ -0.53
CAPRIN1-201ENST00000341394 FOCADQ5VW36 1801 aa11.71□□□□□ -0.53
CAPRIN1-201ENST00000341394 GPR75-ASB3A0A0A6YYF3 556 aa11.71□□□□□ -0.54
CAPRIN1-201ENST00000341394 CCDC196A0A1B0GTZ2 297 aa11.71□□□□□ -0.54
CAPRIN1-201ENST00000341394 KCNA3P22001 575 aa11.71□□□□□ -0.54
CAPRIN1-201ENST00000341394 RASGRP2Q7LDG7 609 aa11.71□□□□□ -0.54
CAPRIN1-201ENST00000341394 KRI1Q8N9T8 703 aaKnown RBP11.71□□□□□ -0.54
CAPRIN1-201ENST00000341394 WASF1Q92558 559 aa11.71□□□□□ -0.54
CAPRIN1-201ENST00000341394 CEP131Q9UPN4 1083 aa11.71□□□□□ -0.54
CAPRIN1-201ENST00000341394 GOLGA6L7A0A1B0GV03 622 aa11.71□□□□□ -0.54
CAPRIN1-201ENST00000341394 ASIC1P78348 528 aa11.71□□□□□ -0.54
CAPRIN1-201ENST00000341394 FBXL16Q8N461 479 aa11.71□□□□□ -0.54
CAPRIN1-201ENST00000341394 ZSCAN10Q96SZ4 725 aaPredicted RBP11.71□□□□□ -0.54
CAPRIN1-201ENST00000341394 SAMSN1Q9NSI8 373 aaKnown RBP11.71□□□□□ -0.54
CAPRIN1-201ENST00000341394 PPP2R2CQ9Y2T4 447 aa11.71□□□□□ -0.54
CAPRIN1-201ENST00000341394 DLEC1Q9Y238 1755 aa11.71□□□□□ -0.54
CAPRIN1-201ENST00000341394 GABPB1Q06547 395 aaPredicted RBP11.7□□□□□ -0.54
CAPRIN1-201ENST00000341394 TTC31Q49AM3 519 aaPredicted RBP11.7□□□□□ -0.54
CAPRIN1-201ENST00000341394 CCDC40Q4G0X9 1142 aa11.7□□□□□ -0.54
CAPRIN1-201ENST00000341394 PIK3AP1Q6ZUJ8 805 aa11.7□□□□□ -0.54
CAPRIN1-201ENST00000341394 ARHGAP27Q6ZUM4 889 aa11.7□□□□□ -0.54
CAPRIN1-201ENST00000341394 TBC1D7Q9P0N9 293 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms