RNA–Protein interactions for RNA: ENST00000340882.2

NECTIN1-202, Transcript of nectin cell adhesion molecule 1, humanhuman

TSL 1 (best) BASIC

Gene NECTIN1, Length 1,059 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN1-202ENST00000340882 USP17L21D6R901 530 aa19.74■□□□□ 0.75
NECTIN1-202ENST00000340882 TLR3O15455 904 aaKnown RBP19.74■□□□□ 0.75
NECTIN1-202ENST00000340882 MBD4O95243 580 aa19.74■□□□□ 0.75
NECTIN1-202ENST00000340882 CCL23P55773 120 aa19.74■□□□□ 0.75
NECTIN1-202ENST00000340882 TTF1Q15361 905 aaPredicted RBP19.74■□□□□ 0.75
NECTIN1-202ENST00000340882 SLC43A3Q8NBI5 491 aa19.74■□□□□ 0.75
NECTIN1-202ENST00000340882 KANSL2Q9H9L4 492 aa19.74■□□□□ 0.75
NECTIN1-202ENST00000340882 GOPCQ9HD26 462 aa19.74■□□□□ 0.75
NECTIN1-202ENST00000340882 GRIN2DO15399 1336 aa19.74■□□□□ 0.75
NECTIN1-202ENST00000340882 PPP2R2DQ66LE6 453 aa19.73■□□□□ 0.75
NECTIN1-202ENST00000340882 CXCL17Q6UXB2 119 aa19.73■□□□□ 0.75
NECTIN1-202ENST00000340882 ARMCX2Q7L311 632 aa19.73■□□□□ 0.75
NECTIN1-202ENST00000340882 ZNF467Q7Z7K2 595 aaPredicted RBP19.73■□□□□ 0.75
NECTIN1-202ENST00000340882 CPXCR1Q8N123 301 aa19.73■□□□□ 0.75
NECTIN1-202ENST00000340882 DNAJC2Q99543 621 aaKnown RBP19.73■□□□□ 0.75
NECTIN1-202ENST00000340882 SLF1Q9BQI6 1058 aa19.73■□□□□ 0.75
NECTIN1-202ENST00000340882 WNT8AQ9H1J5 351 aa19.73■□□□□ 0.75
NECTIN1-202ENST00000340882 ABHD16BQ9H3Z7 469 aa19.73■□□□□ 0.75
NECTIN1-202ENST00000340882 HIPK3Q9H422 1215 aa19.73■□□□□ 0.75
NECTIN1-202ENST00000340882 RLBP1P12271 317 aa19.72■□□□□ 0.75
NECTIN1-202ENST00000340882 ZKSCAN2Q63HK3 967 aa19.72■□□□□ 0.75
NECTIN1-202ENST00000340882 KRT40Q6A162 431 aa19.72■□□□□ 0.75
NECTIN1-202ENST00000340882 KHSRPQ92945 711 aaKnown RBP eCLIP19.72■□□□□ 0.75
NECTIN1-202ENST00000340882 TRPV6Q9H1D0 765 aa19.72■□□□□ 0.75
NECTIN1-202ENST00000340882 TSPYL2Q9H2G4 693 aaPredicted RBP19.72■□□□□ 0.75
NECTIN1-202ENST00000340882 SPC25Q9HBM1 224 aa19.72■□□□□ 0.75
NECTIN1-202ENST00000340882 ATP8A2Q9NTI2 1148 aa19.72■□□□□ 0.75
NECTIN1-202ENST00000340882 EPOPA6NHQ4 379 aa19.71■□□□□ 0.75
NECTIN1-202ENST00000340882 NKX3-2P78367 333 aa19.71■□□□□ 0.75
NECTIN1-202ENST00000340882 CEP85Q6P2H3 762 aa19.71■□□□□ 0.75
NECTIN1-202ENST00000340882 CCDC144CPQ8IYA2 1237 aa19.71■□□□□ 0.75
NECTIN1-202ENST00000340882 NOC4LQ9BVI4 516 aaKnown RBP19.71■□□□□ 0.75
NECTIN1-202ENST00000340882 RAVER2Q9HCJ3 691 aaKnown RBP19.71■□□□□ 0.75
NECTIN1-202ENST00000340882 DDX49Q9Y6V7 483 aaKnown RBP19.71■□□□□ 0.75
NECTIN1-202ENST00000340882 ERC2O15083 957 aa19.7■□□□□ 0.74
NECTIN1-202ENST00000340882 ADD2P35612 726 aa19.7■□□□□ 0.74
NECTIN1-202ENST00000340882 CNTN2Q02246 1040 aa19.7■□□□□ 0.74
NECTIN1-202ENST00000340882 SKIV2LQ15477 1246 aaKnown RBP19.7■□□□□ 0.74
NECTIN1-202ENST00000340882 SCLYQ96I15 445 aa19.7■□□□□ 0.74
NECTIN1-202ENST00000340882 MTIF3Q9H2K0 278 aaKnown RBP19.7■□□□□ 0.74
NECTIN1-202ENST00000340882 CERS4Q9HA82 394 aa19.7■□□□□ 0.74
NECTIN1-202ENST00000340882 PCDHA11Q9Y5I1 949 aa19.7■□□□□ 0.74
NECTIN1-202ENST00000340882 MTCH2Q9Y6C9 303 aa19.7■□□□□ 0.74
NECTIN1-202ENST00000340882 F5H6K3 240 aa19.69■□□□□ 0.74
NECTIN1-202ENST00000340882 ATP2A1O14983 1001 aa19.69■□□□□ 0.74
NECTIN1-202ENST00000340882 B4GALT4O60513 344 aa19.69■□□□□ 0.74
NECTIN1-202ENST00000340882 NDUFB10O96000 172 aa19.69■□□□□ 0.74
NECTIN1-202ENST00000340882 KLRC3Q07444 240 aa19.69■□□□□ 0.74
NECTIN1-202ENST00000340882 ITGA7Q13683 1181 aa19.69■□□□□ 0.74
NECTIN1-202ENST00000340882 TMEM63BQ5T3F8 832 aa19.69■□□□□ 0.74
NECTIN1-202ENST00000340882 CTR9Q6PD62 1173 aa19.69■□□□□ 0.74
NECTIN1-202ENST00000340882 DHX30Q7L2E3 1194 aaKnown RBP eCLIP19.69■□□□□ 0.74
NECTIN1-202ENST00000340882 ANKRD35Q8N283 1001 aa19.69■□□□□ 0.74
NECTIN1-202ENST00000340882 C11orf16Q9NQ32 467 aa19.69■□□□□ 0.74
NECTIN1-202ENST00000340882 SLC4A7Q9Y6M7 1214 aa19.69■□□□□ 0.74
NECTIN1-202ENST00000340882 LCTP09848 1927 aa19.68■□□□□ 0.74
NECTIN1-202ENST00000340882 TLL1O43897 1013 aa19.68■□□□□ 0.74
NECTIN1-202ENST00000340882 ARHGEF15O94989 841 aa19.68■□□□□ 0.74
NECTIN1-202ENST00000340882 PSMC6P62333 389 aa19.68■□□□□ 0.74
NECTIN1-202ENST00000340882 TTLL4Q14679 1199 aa19.68■□□□□ 0.74
NECTIN1-202ENST00000340882 PRPF38AQ8NAV1 312 aaKnown RBP19.68■□□□□ 0.74
NECTIN1-202ENST00000340882 RHPN1Q8TCX5 695 aa19.68■□□□□ 0.74
NECTIN1-202ENST00000340882 AGBL1Q96MI9 1066 aa19.68■□□□□ 0.74
NECTIN1-202ENST00000340882 GNEQ9Y223 722 aaKnown RBP19.68■□□□□ 0.74
NECTIN1-202ENST00000340882 ZBED9Q6R2W3 1325 aa19.68■□□□□ 0.74
NECTIN1-202ENST00000340882 PTPRSQ13332 1948 aa19.68■□□□□ 0.74
NECTIN1-202ENST00000340882 ZBBXA8MT70 800 aa19.67■□□□□ 0.74
NECTIN1-202ENST00000340882 TNFAIP2Q03169 654 aa19.67■□□□□ 0.74
NECTIN1-202ENST00000340882 AAK1Q2M2I8 961 aa19.67■□□□□ 0.74
NECTIN1-202ENST00000340882 ERC1Q8IUD2 1116 aa19.67■□□□□ 0.74
NECTIN1-202ENST00000340882 ITPRIPQ8IWB1 547 aa19.67■□□□□ 0.74
NECTIN1-202ENST00000340882 STK11IPQ8N1F8 1099 aa19.67■□□□□ 0.74
NECTIN1-202ENST00000340882 PPIL4Q8WUA2 492 aaKnown RBP eCLIP19.67■□□□□ 0.74
NECTIN1-202ENST00000340882 KIFC2Q96AC6 838 aa19.67■□□□□ 0.74
NECTIN1-202ENST00000340882 SLC38A10Q9HBR0 1119 aa19.67■□□□□ 0.74
NECTIN1-202ENST00000340882 ARIH1Q9Y4X5 557 aaPredicted RBP19.67■□□□□ 0.74
NECTIN1-202ENST00000340882 BRWD1Q9NSI6 2320 aa19.67■□□□□ 0.74
NECTIN1-202ENST00000340882 TET1Q8NFU7 2136 aa19.66■□□□□ 0.74
NECTIN1-202ENST00000340882 CA3P07451 260 aa19.66■□□□□ 0.74
NECTIN1-202ENST00000340882 ATP2A2P16615 1042 aaKnown RBP19.66■□□□□ 0.74
NECTIN1-202ENST00000340882 POU3F3P20264 500 aaPredicted RBP19.66■□□□□ 0.74
NECTIN1-202ENST00000340882 RASA1P20936 1047 aa19.66■□□□□ 0.74
NECTIN1-202ENST00000340882 BCL11AQ9H165 835 aa19.66■□□□□ 0.74
NECTIN1-202ENST00000340882 HCN4Q9Y3Q4 1203 aa19.66■□□□□ 0.74
NECTIN1-202ENST00000340882 COL4A4P53420 1690 aaPredicted RBP19.65■□□□□ 0.74
NECTIN1-202ENST00000340882 MUC6Q6W4X9 2439 aa19.65■□□□□ 0.74
NECTIN1-202ENST00000340882 SOWAHBA6NEL2 793 aa19.65■□□□□ 0.74
NECTIN1-202ENST00000340882 FAM86C2PA6NEL3 165 aa19.65■□□□□ 0.74
NECTIN1-202ENST00000340882 ZBED4O75132 1171 aa19.65■□□□□ 0.74
NECTIN1-202ENST00000340882 FSCN1Q16658 493 aaKnown RBP19.65■□□□□ 0.74
NECTIN1-202ENST00000340882 TMEM31Q5JXX7 168 aa19.65■□□□□ 0.74
NECTIN1-202ENST00000340882 NOL8Q76FK4 1167 aaKnown RBP19.65■□□□□ 0.74
NECTIN1-202ENST00000340882 TLK2Q86UE8 772 aa19.65■□□□□ 0.74
NECTIN1-202ENST00000340882 FAM133AQ8N9E0 248 aa19.65■□□□□ 0.74
NECTIN1-202ENST00000340882 BOLA2Q9H3K6 86 aa19.65■□□□□ 0.74
NECTIN1-202ENST00000340882 PDGFCQ9NRA1 345 aa19.65■□□□□ 0.74
NECTIN1-202ENST00000340882 HOMER2Q9NSB8 354 aa19.65■□□□□ 0.74
NECTIN1-202ENST00000340882 PAG1Q9NWQ8 432 aa19.65■□□□□ 0.74
NECTIN1-202ENST00000340882 NYAP2Q9P242 653 aa19.65■□□□□ 0.74
NECTIN1-202ENST00000340882 SLC4A4Q9Y6R1 1079 aa19.65■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms