RNA–Protein interactions for RNA: ENST00000339570.9

SCARB1-202, Transcript of scavenger receptor class B member 1, humanhuman

TSL 5 BASIC

Gene SCARB1, Length 3,329 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-202ENST00000339570 ZNF512BQ96KM6 892 aaPredicted RBP18.05■□□□□ 0.48
SCARB1-202ENST00000339570 NOC4LQ9BVI4 516 aaKnown RBP18.05■□□□□ 0.48
SCARB1-202ENST00000339570 FAM107BQ9H098 131 aa18.05■□□□□ 0.48
SCARB1-202ENST00000339570 CENPHQ9H3R5 247 aa18.05■□□□□ 0.48
SCARB1-202ENST00000339570 CNTNAP5Q8WYK1 1306 aa18.05■□□□□ 0.48
SCARB1-202ENST00000339570 KRT86O43790 486 aa18.05■□□□□ 0.48
SCARB1-202ENST00000339570 PROCA1Q8NCQ7 364 aaPredicted RBP18.05■□□□□ 0.48
SCARB1-202ENST00000339570 COG1Q8WTW3 980 aa18.05■□□□□ 0.48
SCARB1-202ENST00000339570 HNRNPLLQ8WVV9 542 aaKnown RBP18.05■□□□□ 0.48
SCARB1-202ENST00000339570 SELENOOQ9BVL4 669 aa18.05■□□□□ 0.48
SCARB1-202ENST00000339570 SAP30BPQ9UHR5 308 aaKnown RBP18.05■□□□□ 0.48
SCARB1-202ENST00000339570 MST1RQ04912 1400 aa18.05■□□□□ 0.48
SCARB1-202ENST00000339570 ESYT3A0FGR9 886 aa18.05■□□□□ 0.48
SCARB1-202ENST00000339570 PSMA7O14818 248 aa18.05■□□□□ 0.48
SCARB1-202ENST00000339570 USP5P45974 858 aa18.05■□□□□ 0.48
SCARB1-202ENST00000339570 NFRKBQ6P4R8 1299 aa18.05■□□□□ 0.48
SCARB1-202ENST00000339570 CCDC155Q8N6L0 562 aa18.05■□□□□ 0.48
SCARB1-202ENST00000339570 CCDC51Q96ER9 411 aa18.05■□□□□ 0.48
SCARB1-202ENST00000339570 CCDC42Q96M95 316 aa18.05■□□□□ 0.48
SCARB1-202ENST00000339570 MYH7P12883 1935 aa18.05■□□□□ 0.48
SCARB1-202ENST00000339570 DHX37Q8IY37 1157 aaKnown RBP18.04■□□□□ 0.48
SCARB1-202ENST00000339570 KAT14Q9H8E8 782 aa18.04■□□□□ 0.48
SCARB1-202ENST00000339570 HPCAL4Q9UM19 191 aa18.04■□□□□ 0.48
SCARB1-202ENST00000339570 IVLP07476 585 aa18.04■□□□□ 0.48
SCARB1-202ENST00000339570 TFAP4Q01664 338 aa18.04■□□□□ 0.48
SCARB1-202ENST00000339570 TRAPPC11Q7Z392 1133 aa18.04■□□□□ 0.48
SCARB1-202ENST00000339570 BLIDQ8IZY5 108 aa18.04■□□□□ 0.48
SCARB1-202ENST00000339570 DMGDHQ9UI17 866 aaKnown RBP18.04■□□□□ 0.48
SCARB1-202ENST00000339570 ZEB2O60315 1214 aa18.03■□□□□ 0.48
SCARB1-202ENST00000339570 CCDC181Q5TID7 509 aa18.03■□□□□ 0.48
SCARB1-202ENST00000339570 CNOT6LQ96LI5 555 aaKnown RBP18.03■□□□□ 0.48
SCARB1-202ENST00000339570 LRRC1Q9BTT6 524 aa18.03■□□□□ 0.48
SCARB1-202ENST00000339570 DISC1Q9NRI5 854 aa18.03■□□□□ 0.48
SCARB1-202ENST00000339570 PHRF1Q9P1Y6 1649 aaKnown RBP18.03■□□□□ 0.48
SCARB1-202ENST00000339570 TECP42680 631 aa18.03■□□□□ 0.48
SCARB1-202ENST00000339570 KIF5AQ12840 1032 aa18.03■□□□□ 0.48
SCARB1-202ENST00000339570 SF3A3Q12874 501 aaKnown RBP eCLIP18.03■□□□□ 0.482e-6■■■□□ 17.8
SCARB1-202ENST00000339570 STK4Q13043 487 aa18.03■□□□□ 0.48
SCARB1-202ENST00000339570 LRRC41Q15345 812 aa18.03■□□□□ 0.48
SCARB1-202ENST00000339570 CAVIN4Q5BKX8 364 aa18.03■□□□□ 0.48
SCARB1-202ENST00000339570 PACS2Q86VP3 889 aa18.03■□□□□ 0.48
SCARB1-202ENST00000339570 LRRC15Q8TF66 581 aa18.03■□□□□ 0.48
SCARB1-202ENST00000339570 IFT81Q8WYA0 676 aa18.03■□□□□ 0.48
SCARB1-202ENST00000339570 HAUS4Q9H6D7 363 aa18.03■□□□□ 0.48
SCARB1-202ENST00000339570 NLRC4Q9NPP4 1024 aa18.03■□□□□ 0.48
SCARB1-202ENST00000339570 CAPN6Q9Y6Q1 641 aa18.03■□□□□ 0.48
SCARB1-202ENST00000339570 ECM29Q5VYK3 1845 aa18.03■□□□□ 0.48
SCARB1-202ENST00000339570 GOLGA6CA6NDK9 693 aa18.03■□□□□ 0.48
SCARB1-202ENST00000339570 AKR1B10O60218 316 aa18.03■□□□□ 0.48
SCARB1-202ENST00000339570 SSBP05455 408 aaKnown RBP eCLIP18.03■□□□□ 0.48
SCARB1-202ENST00000339570 GOLGA6DP0CG33 693 aa18.03■□□□□ 0.48
SCARB1-202ENST00000339570 NKX1-1Q15270 411 aaPredicted RBP18.03■□□□□ 0.48
SCARB1-202ENST00000339570 SPA17Q15506 151 aa18.03■□□□□ 0.48
SCARB1-202ENST00000339570 ANKRD40Q6AI12 368 aa18.03■□□□□ 0.48
SCARB1-202ENST00000339570 SH2D3CQ8N5H7 860 aa18.03■□□□□ 0.48
SCARB1-202ENST00000339570 ZNF384Q8TF68 577 aa18.03■□□□□ 0.48
SCARB1-202ENST00000339570 GOLGA6AQ9NYA3 693 aa18.03■□□□□ 0.48
SCARB1-202ENST00000339570 ATRNO75882 1429 aa18.03■□□□□ 0.48
SCARB1-202ENST00000339570 ADAMTS7Q9UKP4 1686 aa18.02■□□□□ 0.48
SCARB1-202ENST00000339570 GOLGA6BA6NDN3 693 aa18.02■□□□□ 0.48
SCARB1-202ENST00000339570 LGALS16A8MUM7 142 aa18.02■□□□□ 0.48
SCARB1-202ENST00000339570 CCNT1O60563 726 aaKnown RBP18.02■□□□□ 0.48
SCARB1-202ENST00000339570 PLCG1P19174 1290 aa18.02■□□□□ 0.48
SCARB1-202ENST00000339570 TDRD12Q587J7 1177 aaKnown RBP18.02■□□□□ 0.48
SCARB1-202ENST00000339570 GJA10Q969M2 543 aa18.02■□□□□ 0.48
SCARB1-202ENST00000339570 MS4A14Q96JA4 679 aa18.02■□□□□ 0.48
SCARB1-202ENST00000339570 RIOK1Q9BRS2 568 aaKnown RBP18.02■□□□□ 0.48
SCARB1-202ENST00000339570 MKNK2Q9HBH9 465 aa18.02■□□□□ 0.48
SCARB1-202ENST00000339570 RMND1Q9NWS8 449 aa18.02■□□□□ 0.48
SCARB1-202ENST00000339570 BAZ2AQ9UIF9 1905 aaKnown RBP18.02■□□□□ 0.48
SCARB1-202ENST00000339570 CYLC1P35663 651 aaPredicted RBP18.02■□□□□ 0.48
SCARB1-202ENST00000339570 DNAAF5Q86Y56 855 aa18.02■□□□□ 0.48
SCARB1-202ENST00000339570 ELOA2Q8IYF1 753 aaPredicted RBP18.02■□□□□ 0.48
SCARB1-202ENST00000339570 EXOC1Q9NV70 894 aa18.02■□□□□ 0.48
SCARB1-202ENST00000339570 TBC1D7Q9P0N9 293 aa18.02■□□□□ 0.48
SCARB1-202ENST00000339570 PNPLA7Q6ZV29 1317 aa18.02■□□□□ 0.47
SCARB1-202ENST00000339570 H7C1D1 291 aa18.01■□□□□ 0.47
SCARB1-202ENST00000339570 EPHB6O15197 1021 aa18.01■□□□□ 0.47
SCARB1-202ENST00000339570 TTC31Q49AM3 519 aaPredicted RBP18.01■□□□□ 0.47
SCARB1-202ENST00000339570 ADSSL1Q8N142 457 aa18.01■□□□□ 0.47
SCARB1-202ENST00000339570 GPR101Q96P66 508 aaPredicted RBP18.01■□□□□ 0.47
SCARB1-202ENST00000339570 TRPM3Q9HCF6 1732 aaPredicted RBP18.01■□□□□ 0.47
SCARB1-202ENST00000339570 RAD21O60216 631 aa18.01■□□□□ 0.47
SCARB1-202ENST00000339570 MECOMQ03112 1051 aa18.01■□□□□ 0.47
SCARB1-202ENST00000339570 NAALADL2Q58DX5 795 aa18.01■□□□□ 0.47
SCARB1-202ENST00000339570 TNFRSF25Q93038 417 aa18.01■□□□□ 0.47
SCARB1-202ENST00000339570 SECISBP2LQ93073 1101 aaKnown RBP18.01■□□□□ 0.47
SCARB1-202ENST00000339570 TSPYL1Q9H0U9 437 aa18.01■□□□□ 0.47
SCARB1-202ENST00000339570 RBM28Q9NW13 759 aaKnown RBP18.01■□□□□ 0.47
SCARB1-202ENST00000339570 ZSCAN5CA6NGD5 496 aaPredicted RBP18.01■□□□□ 0.47
SCARB1-202ENST00000339570 BMP15O95972 392 aa18.01■□□□□ 0.47
SCARB1-202ENST00000339570 APBA1Q02410 837 aa18.01■□□□□ 0.47
SCARB1-202ENST00000339570 RRAGAQ7L523 313 aa18.01■□□□□ 0.47
SCARB1-202ENST00000339570 ANKRD18AQ8IVF6 992 aa18.01■□□□□ 0.47
SCARB1-202ENST00000339570 ZNF34Q8IZ26 560 aa18.01■□□□□ 0.47
SCARB1-202ENST00000339570 CELF1Q92879 486 aaKnown RBP18.01■□□□□ 0.47
SCARB1-202ENST00000339570 PACSIN2Q9UNF0 486 aaPredicted RBP18.01■□□□□ 0.47
SCARB1-202ENST00000339570 SPEF2Q9C093 1822 aa18.01■□□□□ 0.47
SCARB1-202ENST00000339570 GLI3P10071 1580 aa18■□□□□ 0.47
SCARB1-202ENST00000339570 TXKP42681 527 aa18■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 74.1 ms