RNA–Protein interactions for RNA: ENST00000334690.10

TRAPPC11-201, Transcript of trafficking protein particle complex 11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC11, Length 4,552 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-201ENST00000334690 NR5A1Q13285 461 aa18.85■□□□□ 0.61
TRAPPC11-201ENST00000334690 ARHGAP44Q17R89 818 aa18.85■□□□□ 0.61
TRAPPC11-201ENST00000334690 USPL1Q5W0Q7 1092 aa18.85■□□□□ 0.61
TRAPPC11-201ENST00000334690 H2AFVQ71UI9 128 aa18.85■□□□□ 0.61
TRAPPC11-201ENST00000334690 TRIM7Q9C029 511 aa18.85■□□□□ 0.61
TRAPPC11-201ENST00000334690 SRPRBQ9Y5M8 271 aaKnown RBP18.85■□□□□ 0.61
TRAPPC11-201ENST00000334690 RPAP1Q9BWH6 1393 aaPredicted RBP18.85■□□□□ 0.61
TRAPPC11-201ENST00000334690 FBXO11Q86XK2 927 aa18.84■□□□□ 0.61
TRAPPC11-201ENST00000334690 TTLL11Q8NHH1 800 aa18.84■□□□□ 0.61
TRAPPC11-201ENST00000334690 ASPRV1Q53RT3 343 aa18.84■□□□□ 0.61
TRAPPC11-201ENST00000334690 U2AF1L4Q8WU68 220 aaKnown RBP18.84■□□□□ 0.61
TRAPPC11-201ENST00000334690 CCDC97Q96F63 343 aaPredicted RBP18.84■□□□□ 0.61
TRAPPC11-201ENST00000334690 SEC31BQ9NQW1 1179 aa18.84■□□□□ 0.61
TRAPPC11-201ENST00000334690 A2ML1A8K2U0 1454 aa18.84■□□□□ 0.61
TRAPPC11-201ENST00000334690 DCUN1D2Q6PH85 259 aa18.84■□□□□ 0.61
TRAPPC11-201ENST00000334690 PRPF3O43395 683 aaKnown RBP18.84■□□□□ 0.61
TRAPPC11-201ENST00000334690 CDAN1Q8IWY9 1227 aa18.84■□□□□ 0.61
TRAPPC11-201ENST00000334690 LCORLQ8N3X6 602 aa18.84■□□□□ 0.61
TRAPPC11-201ENST00000334690 CNOT6LQ96LI5 555 aaKnown RBP18.84■□□□□ 0.61
TRAPPC11-201ENST00000334690 PLCB1Q9NQ66 1216 aa18.84■□□□□ 0.61
TRAPPC11-201ENST00000334690 USP21Q9UK80 565 aa18.84■□□□□ 0.61
TRAPPC11-201ENST00000334690 FRMPD2Q68DX3 1309 aaPredicted RBP18.84■□□□□ 0.61
TRAPPC11-201ENST00000334690 PHLPP2Q6ZVD8 1323 aa18.84■□□□□ 0.61
TRAPPC11-201ENST00000334690 ABCC12Q96J65 1359 aa18.84■□□□□ 0.61
TRAPPC11-201ENST00000334690 PPFIA4O75335 1185 aa18.83■□□□□ 0.61
TRAPPC11-201ENST00000334690 ADAM9Q13443 819 aa18.83■□□□□ 0.61
TRAPPC11-201ENST00000334690 ZSCAN26Q16670 478 aa18.83■□□□□ 0.61
TRAPPC11-201ENST00000334690 CERKLQ49MI3 558 aaPredicted RBP18.83■□□□□ 0.61
TRAPPC11-201ENST00000334690 NLRX1Q86UT6 975 aa18.83■□□□□ 0.61
TRAPPC11-201ENST00000334690 FAM178BQ8IXR5 827 aa18.83■□□□□ 0.61
TRAPPC11-201ENST00000334690 PCDHA1Q9Y5I3 950 aa18.83■□□□□ 0.61
TRAPPC11-201ENST00000334690 RFX7Q2KHR2 1363 aa18.83■□□□□ 0.61
TRAPPC11-201ENST00000334690 N4BP1O75113 896 aaKnown RBP18.83■□□□□ 0.61
TRAPPC11-201ENST00000334690 MRPL11Q9Y3B7 192 aaKnown RBP18.83■□□□□ 0.61
TRAPPC11-201ENST00000334690 GLI2P10070 1586 aa18.83■□□□□ 0.6
TRAPPC11-201ENST00000334690 SLC8A3P57103 927 aa18.83■□□□□ 0.6
TRAPPC11-201ENST00000334690 SNX16P57768 344 aa18.83■□□□□ 0.6
TRAPPC11-201ENST00000334690 ICA1Q05084 483 aa18.83■□□□□ 0.6
TRAPPC11-201ENST00000334690 TOB2Q14106 344 aaPredicted RBP18.83■□□□□ 0.6
TRAPPC11-201ENST00000334690 GDAP1L1Q96MZ0 367 aa18.83■□□□□ 0.6
TRAPPC11-201ENST00000334690 FAM204AQ9H8W3 233 aa18.83■□□□□ 0.6
TRAPPC11-201ENST00000334690 MAN1B1Q9UKM7 699 aa18.83■□□□□ 0.6
TRAPPC11-201ENST00000334690 KCNK3O14649 394 aa18.83■□□□□ 0.6
TRAPPC11-201ENST00000334690 PRKAB2O43741 272 aa18.83■□□□□ 0.6
TRAPPC11-201ENST00000334690 EPHA10Q5JZY3 1008 aa18.83■□□□□ 0.6
TRAPPC11-201ENST00000334690 LARP4BQ92615 738 aaKnown RBP18.83■□□□□ 0.6
TRAPPC11-201ENST00000334690 NDC80O14777 642 aa18.82■□□□□ 0.6
TRAPPC11-201ENST00000334690 POLR2FP61218 127 aaKnown RBP18.82■□□□□ 0.6
TRAPPC11-201ENST00000334690 SLFN13Q68D06 897 aa18.82■□□□□ 0.6
TRAPPC11-201ENST00000334690 SARM1Q6SZW1 724 aa18.82■□□□□ 0.6
TRAPPC11-201ENST00000334690 OTUD6AQ7L8S5 288 aa18.82■□□□□ 0.6
TRAPPC11-201ENST00000334690 MIER3Q7Z3K6 550 aa18.82■□□□□ 0.6
TRAPPC11-201ENST00000334690 RDH13Q8NBN7 331 aa18.82■□□□□ 0.6
TRAPPC11-201ENST00000334690 hCG_1984214I3L0E3 225 aa18.82■□□□□ 0.6
TRAPPC11-201ENST00000334690 GCFC2P16383 781 aaKnown RBP18.82■□□□□ 0.6
TRAPPC11-201ENST00000334690 ZNF658Q5TYW1 1059 aaPredicted RBP18.82■□□□□ 0.6
TRAPPC11-201ENST00000334690 ZNF713Q8N859 430 aaPredicted RBP18.82■□□□□ 0.6
TRAPPC11-201ENST00000334690 KIFC2Q96AC6 838 aa18.82■□□□□ 0.6
TRAPPC11-201ENST00000334690 STRBPQ96SI9 672 aaKnown RBP18.82■□□□□ 0.6
TRAPPC11-201ENST00000334690 LONRF2Q1L5Z9 754 aa18.82■□□□□ 0.6
TRAPPC11-201ENST00000334690 VSTM4Q8IW00 320 aa18.81■□□□□ 0.6
TRAPPC11-201ENST00000334690 P2RX5Q93086 422 aa18.81■□□□□ 0.6
TRAPPC11-201ENST00000334690 RIC8AQ9NPQ8 531 aa18.81■□□□□ 0.6
TRAPPC11-201ENST00000334690 PNMA2Q9UL42 364 aa18.81■□□□□ 0.6
TRAPPC11-201ENST00000334690 BZW2Q9Y6E2 419 aaKnown RBP18.81■□□□□ 0.6
TRAPPC11-201ENST00000334690 PABPN1LA6NDY0 278 aaKnown RBP18.81■□□□□ 0.6
TRAPPC11-201ENST00000334690 NOP56O00567 594 aaKnown RBP18.81■□□□□ 0.6
TRAPPC11-201ENST00000334690 CYP2J2P51589 502 aa18.81■□□□□ 0.6
TRAPPC11-201ENST00000334690 RASGRF1Q13972 1273 aa18.81■□□□□ 0.6
TRAPPC11-201ENST00000334690 FLAD1Q8NFF5 587 aa18.81■□□□□ 0.6
TRAPPC11-201ENST00000334690 AMNQ9BXJ7 453 aa18.81■□□□□ 0.6
TRAPPC11-201ENST00000334690 SDAD1Q9NVU7 687 aaKnown RBP eCLIP18.81■□□□□ 0.6
TRAPPC11-201ENST00000334690 STK17AQ9UEE5 414 aa18.81■□□□□ 0.6
TRAPPC11-201ENST00000334690 CYP27B1O15528 508 aa18.81■□□□□ 0.6
TRAPPC11-201ENST00000334690 HOXA7P31268 230 aaPredicted RBP18.81■□□□□ 0.6
TRAPPC11-201ENST00000334690 DYNLL1P63167 89 aaKnown RBP18.81■□□□□ 0.6
TRAPPC11-201ENST00000334690 DENND2CQ68D51 928 aa18.81■□□□□ 0.6
TRAPPC11-201ENST00000334690 PAXIP1Q6ZW49 1069 aaPredicted RBP18.81■□□□□ 0.6
TRAPPC11-201ENST00000334690 SLC35F6Q8N357 371 aa18.81■□□□□ 0.6
TRAPPC11-201ENST00000334690 KRIT1O00522 736 aa18.81■□□□□ 0.6
TRAPPC11-201ENST00000334690 FKBP3Q00688 224 aaKnown RBP18.81■□□□□ 0.6
TRAPPC11-201ENST00000334690 AZI2Q9H6S1 392 aa18.81■□□□□ 0.6
TRAPPC11-201ENST00000334690 SSX2IPQ9Y2D8 614 aa18.81■□□□□ 0.6
TRAPPC11-201ENST00000334690 SOS2Q07890 1332 aaPredicted RBP18.8■□□□□ 0.6
TRAPPC11-201ENST00000334690 A0A087WWV3 80 aa18.8■□□□□ 0.6
TRAPPC11-201ENST00000334690 PPIP5K2O43314 1243 aa18.8■□□□□ 0.6
TRAPPC11-201ENST00000334690 POLR2MP0CAP2 368 aa18.8■□□□□ 0.6
TRAPPC11-201ENST00000334690 KRT26Q7Z3Y9 468 aa18.8■□□□□ 0.6
TRAPPC11-201ENST00000334690 ZNF354CQ86Y25 554 aa18.8■□□□□ 0.6
TRAPPC11-201ENST00000334690 MADDQ8WXG6 1647 aa18.8■□□□□ 0.6
TRAPPC11-201ENST00000334690 SPHKAPQ2M3C7 1700 aa18.8■□□□□ 0.6
TRAPPC11-201ENST00000334690 TMC4Q7Z404 712 aa18.8■□□□□ 0.6
TRAPPC11-201ENST00000334690 PIH1D3Q9NQM4 214 aaKnown RBP18.8■□□□□ 0.6
TRAPPC11-201ENST00000334690 GJA3Q9Y6H8 435 aa18.8■□□□□ 0.6
TRAPPC11-201ENST00000334690 ABCB4P21439 1286 aa18.8■□□□□ 0.6
TRAPPC11-201ENST00000334690 FYB2Q5VWT5 728 aa18.8■□□□□ 0.6
TRAPPC11-201ENST00000334690 XPO5Q9HAV4 1204 aaKnown RBP eCLIP18.8■□□□□ 0.6
TRAPPC11-201ENST00000334690 SPTLC3Q9NUV7 552 aa18.8■□□□□ 0.6
TRAPPC11-201ENST00000334690 CD19P15391 556 aa18.79■□□□□ 0.6
TRAPPC11-201ENST00000334690 TNFAIP1Q13829 316 aa18.79■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms