RNA–Protein interactions for RNA: ENST00000330452.7

PRKCD-201, Transcript of protein kinase C delta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRKCD, Length 2,680 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCD-201ENST00000330452 FANCBQ8NB91 859 aa19.16■□□□□ 0.66
PRKCD-201ENST00000330452 TMX4Q9H1E5 349 aaPredicted RBP19.16■□□□□ 0.66
PRKCD-201ENST00000330452 SERTAD1Q9UHV2 236 aa19.16■□□□□ 0.66
PRKCD-201ENST00000330452 AFF2P51816 1311 aa19.15■□□□□ 0.66
PRKCD-201ENST00000330452 SYF2O95926 243 aaKnown RBP19.15■□□□□ 0.66
PRKCD-201ENST00000330452 NCAPG2Q86XI2 1143 aa19.15■□□□□ 0.66
PRKCD-201ENST00000330452 MAB21L3Q8N8X9 362 aa19.15■□□□□ 0.66
PRKCD-201ENST00000330452 LMBR1Q8WVP7 490 aa19.15■□□□□ 0.66
PRKCD-201ENST00000330452 EPB41L3Q9Y2J2 1087 aaPredicted RBP19.15■□□□□ 0.66
PRKCD-201ENST00000330452 CHD4Q14839 1912 aa19.15■□□□□ 0.66
PRKCD-201ENST00000330452 ATXN2Q99700 1313 aaKnown RBP19.15■□□□□ 0.66
PRKCD-201ENST00000330452 hCG_1642624A0A1W2PR95 340 aa19.15■□□□□ 0.66
PRKCD-201ENST00000330452 LRRIQ3A6PVS8 624 aaPredicted RBP19.15■□□□□ 0.66
PRKCD-201ENST00000330452 DEXIO95424 95 aa19.15■□□□□ 0.66
PRKCD-201ENST00000330452 PTPREP23469 700 aa19.15■□□□□ 0.66
PRKCD-201ENST00000330452 IRAK1P51617 712 aa19.15■□□□□ 0.66
PRKCD-201ENST00000330452 USP49Q70CQ1 688 aa19.15■□□□□ 0.66
PRKCD-201ENST00000330452 FNBP4Q8N3X1 1017 aaPredicted RBP19.15■□□□□ 0.66
PRKCD-201ENST00000330452 ZSWIM4Q9H7M6 989 aa19.15■□□□□ 0.66
PRKCD-201ENST00000330452 KAT14Q9H8E8 782 aa19.15■□□□□ 0.66
PRKCD-201ENST00000330452 ARAP2Q8WZ64 1704 aa19.14■□□□□ 0.66
PRKCD-201ENST00000330452 VWA3AA6NCI4 1184 aa19.14■□□□□ 0.65
PRKCD-201ENST00000330452 MSANTD4Q8NCY6 345 aa19.14■□□□□ 0.65
PRKCD-201ENST00000330452 SMARCC1Q92922 1105 aaPredicted RBP19.14■□□□□ 0.65
PRKCD-201ENST00000330452 SHISA4Q96DD7 197 aa19.14■□□□□ 0.65
PRKCD-201ENST00000330452 UBAC1Q9BSL1 405 aa19.14■□□□□ 0.65
PRKCD-201ENST00000330452 FOXP1Q9H334 677 aaPredicted RBP19.14■□□□□ 0.65
PRKCD-201ENST00000330452 ATP6V0A4Q9HBG4 840 aa19.14■□□□□ 0.65
PRKCD-201ENST00000330452 CABP5Q9NP86 173 aa19.14■□□□□ 0.65
PRKCD-201ENST00000330452 MAN1B1Q9UKM7 699 aa19.14■□□□□ 0.65
PRKCD-201ENST00000330452 DOCK2Q92608 1830 aa19.14■□□□□ 0.65
PRKCD-201ENST00000330452 FAM205CA6NFA0 338 aa19.14■□□□□ 0.65
PRKCD-201ENST00000330452 POSTNQ15063 836 aa19.14■□□□□ 0.65
PRKCD-201ENST00000330452 KIAA1328Q86T90 577 aa19.14■□□□□ 0.65
PRKCD-201ENST00000330452 BCAS4Q8TDM0 211 aa19.14■□□□□ 0.65
PRKCD-201ENST00000330452 DHX58Q96C10 678 aa19.14■□□□□ 0.65
PRKCD-201ENST00000330452 HOMER3Q9NSC5 361 aa19.14■□□□□ 0.65
PRKCD-201ENST00000330452 INTS13Q9NVM9 706 aa19.14■□□□□ 0.65
PRKCD-201ENST00000330452 NID2Q14112 1375 aa19.13■□□□□ 0.65
PRKCD-201ENST00000330452 CYP2D7A0A087X1C5 515 aa19.13■□□□□ 0.65
PRKCD-201ENST00000330452 CBFA2T2O43439 604 aa19.13■□□□□ 0.65
PRKCD-201ENST00000330452 RASSF9O75901 435 aa19.13■□□□□ 0.65
PRKCD-201ENST00000330452 RILPL1Q5EBL4 403 aa19.13■□□□□ 0.65
PRKCD-201ENST00000330452 HHATQ5VTY9 493 aa19.13■□□□□ 0.65
PRKCD-201ENST00000330452 VSTM4Q8IW00 320 aa19.13■□□□□ 0.65
PRKCD-201ENST00000330452 IGSF22Q8N9C0 903 aa19.13■□□□□ 0.65
PRKCD-201ENST00000330452 OR8K1Q8NGG5 319 aa19.13■□□□□ 0.65
PRKCD-201ENST00000330452 CCDC97Q96F63 343 aaPredicted RBP19.13■□□□□ 0.65
PRKCD-201ENST00000330452 G3BP2Q9UN86 482 aaKnown RBP19.13■□□□□ 0.65
PRKCD-201ENST00000330452 POTEB2H3BUK9 544 aa19.13■□□□□ 0.65
PRKCD-201ENST00000330452 EZRP15311 586 aaKnown RBP19.13■□□□□ 0.65
PRKCD-201ENST00000330452 SMTNP53814 917 aa19.13■□□□□ 0.65
PRKCD-201ENST00000330452 CHMP4BP1P59074 171 aa19.13■□□□□ 0.65
PRKCD-201ENST00000330452 FMR1Q06787 632 aaKnown RBP eCLIP19.13■□□□□ 0.65
PRKCD-201ENST00000330452 TRMT44Q8IYL2 757 aaKnown RBP19.13■□□□□ 0.65
PRKCD-201ENST00000330452 ARHGEF1Q92888 912 aaKnown RBP19.13■□□□□ 0.65
PRKCD-201ENST00000330452 EHD4Q9H223 541 aa19.13■□□□□ 0.65
PRKCD-201ENST00000330452 TNKSO95271 1327 aa19.13■□□□□ 0.65
PRKCD-201ENST00000330452 SHTN1A0MZ66 631 aa19.12■□□□□ 0.65
PRKCD-201ENST00000330452 SETSIPP0DME0 302 aa19.12■□□□□ 0.65
PRKCD-201ENST00000330452 TOP1P11387 765 aaKnown RBP19.12■□□□□ 0.65
PRKCD-201ENST00000330452 GNG11P61952 73 aa19.12■□□□□ 0.65
PRKCD-201ENST00000330452 TIAM2Q8IVF5 1701 aa19.12■□□□□ 0.65
PRKCD-201ENST00000330452 GJD4Q96KN9 370 aaPredicted RBP19.12■□□□□ 0.65
PRKCD-201ENST00000330452 RNF41Q9H4P4 317 aaPredicted RBP19.12■□□□□ 0.65
PRKCD-201ENST00000330452 LRRC4BQ9NT99 713 aa19.12■□□□□ 0.65
PRKCD-201ENST00000330452 RTN3O95197 1032 aaPredicted RBP19.12■□□□□ 0.65
PRKCD-201ENST00000330452 PYGBP11216 843 aa19.12■□□□□ 0.65
PRKCD-201ENST00000330452 PDIA5Q14554 519 aa19.12■□□□□ 0.65
PRKCD-201ENST00000330452 PARP10Q53GL7 1025 aa19.12■□□□□ 0.65
PRKCD-201ENST00000330452 THEMIS2Q5TEJ8 643 aa19.12■□□□□ 0.65
PRKCD-201ENST00000330452 SEPT12Q8IYM1 358 aa19.12■□□□□ 0.65
PRKCD-201ENST00000330452 TMTC2Q8N394 836 aa19.12■□□□□ 0.65
PRKCD-201ENST00000330452 GPR101Q96P66 508 aaPredicted RBP19.12■□□□□ 0.65
PRKCD-201ENST00000330452 RABEP2Q9H5N1 569 aa19.12■□□□□ 0.65
PRKCD-201ENST00000330452 TFCP2L1Q9NZI6 479 aa19.12■□□□□ 0.65
PRKCD-201ENST00000330452 VPS54Q9P1Q0 977 aa19.12■□□□□ 0.65
PRKCD-201ENST00000330452 SAMM50Q9Y512 469 aa19.12■□□□□ 0.65
PRKCD-201ENST00000330452 MAGEB6P1A0A0J9YX57 407 aa19.11■□□□□ 0.65
PRKCD-201ENST00000330452 PRDM1O75626 825 aa19.11■□□□□ 0.65
PRKCD-201ENST00000330452 AARSP49588 968 aaKnown RBP eCLIP19.11■□□□□ 0.65
PRKCD-201ENST00000330452 DYNLL1P63167 89 aaKnown RBP19.11■□□□□ 0.65
PRKCD-201ENST00000330452 SEC23AQ15436 765 aa19.11■□□□□ 0.65
PRKCD-201ENST00000330452 SLC4A8Q2Y0W8 1093 aa19.11■□□□□ 0.65
PRKCD-201ENST00000330452 CSRNP2Q9H175 543 aa19.11■□□□□ 0.65
PRKCD-201ENST00000330452 CENPHQ9H3R5 247 aa19.11■□□□□ 0.65
PRKCD-201ENST00000330452 BLOC1S6Q9UL45 172 aa19.11■□□□□ 0.65
PRKCD-201ENST00000330452 EARS2Q5JPH6 523 aaKnown RBP19.11■□□□□ 0.65
PRKCD-201ENST00000330452 KIFC2Q96AC6 838 aa19.11■□□□□ 0.65
PRKCD-201ENST00000330452 GOPCQ9HD26 462 aa19.11■□□□□ 0.65
PRKCD-201ENST00000330452 KIAA0754O94854 1291 aa19.1■□□□□ 0.65
PRKCD-201ENST00000330452 IMPDH2P12268 514 aa19.1■□□□□ 0.65
PRKCD-201ENST00000330452 GBP2P32456 591 aaPredicted RBP19.1■□□□□ 0.65
PRKCD-201ENST00000330452 FAM196AQ6ZSG2 479 aa19.1■□□□□ 0.65
PRKCD-201ENST00000330452 SRGAP1Q7Z6B7 1085 aa19.1■□□□□ 0.65
PRKCD-201ENST00000330452 MYO6Q9UM54 1294 aa19.1■□□□□ 0.65
PRKCD-201ENST00000330452 NFE2L3Q9Y4A8 694 aa19.1■□□□□ 0.65
PRKCD-201ENST00000330452 ZPR1O75312 459 aa19.1■□□□□ 0.65
PRKCD-201ENST00000330452 RPSAP08865 295 aaKnown RBP19.1■□□□□ 0.65
PRKCD-201ENST00000330452 PDHBP11177 359 aa19.1■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms