RNA–Protein interactions for RNA: ENST00000322535.10

SF3B2-201, Transcript of splicing factor 3b subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3B2, Length 2,903 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-201ENST00000322535 MCAMP43121 646 aa11.49□□□□□ -0.57
SF3B2-201ENST00000322535 GYG1P46976 350 aa11.49□□□□□ -0.57
SF3B2-201ENST00000322535 RC3H1Q5TC82 1133 aaKnown RBP11.49□□□□□ -0.57
SF3B2-201ENST00000322535 NCAPH2Q6IBW4 605 aa11.49□□□□□ -0.57
SF3B2-201ENST00000322535 CLEC4GQ6UXB4 293 aa11.49□□□□□ -0.57
SF3B2-201ENST00000322535 TPTE2Q6XPS3 522 aa11.49□□□□□ -0.57
SF3B2-201ENST00000322535 KCNN1Q92952 543 aa11.49□□□□□ -0.57
SF3B2-201ENST00000322535 EPB41L2O43491 1005 aaKnown RBP11.49□□□□□ -0.57
SF3B2-201ENST00000322535 OLFM4Q6UX06 510 aa11.49□□□□□ -0.57
SF3B2-201ENST00000322535 BZW1Q7L1Q6 419 aaKnown RBP11.49□□□□□ -0.57
SF3B2-201ENST00000322535 MFN1Q8IWA4 741 aa11.49□□□□□ -0.57
SF3B2-201ENST00000322535 SYCP3Q8IZU3 236 aa11.49□□□□□ -0.57
SF3B2-201ENST00000322535 SPATA7Q9P0W8 599 aa11.49□□□□□ -0.57
SF3B2-201ENST00000322535 KIF5CO60282 957 aa11.49□□□□□ -0.57
SF3B2-201ENST00000322535 IDH1O75874 414 aaKnown RBP11.49□□□□□ -0.57
SF3B2-201ENST00000322535 CIAO1O76071 339 aa11.49□□□□□ -0.57
SF3B2-201ENST00000322535 SNCBQ16143 134 aa11.49□□□□□ -0.57
SF3B2-201ENST00000322535 WASHC4Q2M389 1173 aa11.49□□□□□ -0.57
SF3B2-201ENST00000322535 GNPTABQ3T906 1256 aa11.49□□□□□ -0.57
SF3B2-201ENST00000322535 RIC1Q4ADV7 1423 aa11.49□□□□□ -0.57
SF3B2-201ENST00000322535 CCDC102BQ68D86 513 aa11.49□□□□□ -0.57
SF3B2-201ENST00000322535 STK11IPQ8N1F8 1099 aa11.49□□□□□ -0.57
SF3B2-201ENST00000322535 MSANTD4Q8NCY6 345 aa11.49□□□□□ -0.57
SF3B2-201ENST00000322535 NLRP3Q96P20 1036 aa11.49□□□□□ -0.57
SF3B2-201ENST00000322535 USP28Q96RU2 1077 aa11.49□□□□□ -0.57
SF3B2-201ENST00000322535 HAUS7Q99871 368 aa11.49□□□□□ -0.57
SF3B2-201ENST00000322535 HPCAL4Q9UM19 191 aa11.49□□□□□ -0.57
SF3B2-201ENST00000322535 AOX1Q06278 1338 aa11.48□□□□□ -0.57
SF3B2-201ENST00000322535 MEFVO15553 781 aaPredicted RBP11.48□□□□□ -0.57
SF3B2-201ENST00000322535 LGR5O75473 907 aa11.48□□□□□ -0.57
SF3B2-201ENST00000322535 GNAT1P11488 350 aa11.48□□□□□ -0.57
SF3B2-201ENST00000322535 GJA8P48165 433 aa11.48□□□□□ -0.57
SF3B2-201ENST00000322535 IFT88Q13099 833 aa11.48□□□□□ -0.57
SF3B2-201ENST00000322535 COL23A1Q86Y22 540 aaPredicted RBP11.48□□□□□ -0.57
SF3B2-201ENST00000322535 NME8Q8N427 588 aa11.48□□□□□ -0.57
SF3B2-201ENST00000322535 VGLL2Q8N8G2 317 aa11.48□□□□□ -0.57
SF3B2-201ENST00000322535 SLC40A1Q9NP59 571 aa11.48□□□□□ -0.57
SF3B2-201ENST00000322535 PAPOLBQ9NRJ5 636 aaKnown RBP11.48□□□□□ -0.57
SF3B2-201ENST00000322535 HDAC6Q9UBN7 1215 aa11.48□□□□□ -0.57
SF3B2-201ENST00000322535 SOWAHDA6NJG2 315 aa11.48□□□□□ -0.57
SF3B2-201ENST00000322535 EIF3HO15372 352 aaKnown RBP eCLIP11.48□□□□□ -0.571e-7■□□□□ 10.9
SF3B2-201ENST00000322535 SMNDC1O75940 238 aaKnown RBP eCLIP11.48□□□□□ -0.577e-6■□□□□ 8.6
SF3B2-201ENST00000322535 RESTQ13127 1097 aa11.48□□□□□ -0.57
SF3B2-201ENST00000322535 SF3B2Q13435 895 aaKnown RBP11.48□□□□□ -0.57
SF3B2-201ENST00000322535 LRRC23Q53EV4 343 aaPredicted RBP11.48□□□□□ -0.57
SF3B2-201ENST00000322535 TAX1BP1Q86VP1 789 aa11.48□□□□□ -0.57
SF3B2-201ENST00000322535 PARP9Q8IXQ6 854 aa11.48□□□□□ -0.57
SF3B2-201ENST00000322535 CNBD1Q8NA66 436 aa11.48□□□□□ -0.57
SF3B2-201ENST00000322535 AGAP3Q96P47 875 aa11.48□□□□□ -0.57
SF3B2-201ENST00000322535 CDC5LQ99459 802 aaKnown RBP11.48□□□□□ -0.57
SF3B2-201ENST00000322535 ZSWIM6Q9HCJ5 1215 aa11.48□□□□□ -0.57
SF3B2-201ENST00000322535 KIAA1468Q9P260 1216 aa11.48□□□□□ -0.57
SF3B2-201ENST00000322535 ZNF219Q9P2Y4 722 aaPredicted RBP11.48□□□□□ -0.57
SF3B2-201ENST00000322535 COL5A3P25940 1745 aaPredicted RBP11.48□□□□□ -0.57
SF3B2-201ENST00000322535 ZNF609O15014 1411 aa11.47□□□□□ -0.57
SF3B2-201ENST00000322535 NHSQ6T4R5 1651 aa11.47□□□□□ -0.57
SF3B2-201ENST00000322535 GOLGA6L9A6NEM1 432 aa11.47□□□□□ -0.57
SF3B2-201ENST00000322535 MYO1BO43795 1136 aa11.47□□□□□ -0.57
SF3B2-201ENST00000322535 SLC3A2P08195 630 aaKnown RBP11.47□□□□□ -0.57
SF3B2-201ENST00000322535 NDUFA8P51970 172 aa11.47□□□□□ -0.57
SF3B2-201ENST00000322535 SMTNP53814 917 aa11.47□□□□□ -0.57
SF3B2-201ENST00000322535 MECOMQ03112 1051 aa11.47□□□□□ -0.57
SF3B2-201ENST00000322535 CCDC13Q8IYE1 715 aa11.47□□□□□ -0.57
SF3B2-201ENST00000322535 RSRC1Q96IZ7 334 aaKnown RBP11.47□□□□□ -0.57
SF3B2-201ENST00000322535 LONRF3Q496Y0 759 aa11.47□□□□□ -0.57
SF3B2-201ENST00000322535 GALNT17Q6IS24 598 aa11.47□□□□□ -0.57
SF3B2-201ENST00000322535 CTAGE9A4FU28 777 aa11.46□□□□□ -0.57
SF3B2-201ENST00000322535 OPA1O60313 960 aa11.46□□□□□ -0.57
SF3B2-201ENST00000322535 SERPINB2P05120 415 aa11.46□□□□□ -0.57
SF3B2-201ENST00000322535 LINGO3P0C6S8 592 aa11.46□□□□□ -0.57
SF3B2-201ENST00000322535 PPFIA1Q13136 1202 aa11.46□□□□□ -0.57
SF3B2-201ENST00000322535 KCTD16Q68DU8 428 aa11.46□□□□□ -0.57
SF3B2-201ENST00000322535 PRR5LQ6MZQ0 368 aa11.46□□□□□ -0.57
SF3B2-201ENST00000322535 B4GALNT4Q76KP1 1039 aa11.46□□□□□ -0.57
SF3B2-201ENST00000322535 TXNRD3Q86VQ6 643 aa11.46□□□□□ -0.57
SF3B2-201ENST00000322535 TRIM7Q9C029 511 aa11.46□□□□□ -0.57
SF3B2-201ENST00000322535 NACA2Q9H009 215 aa11.46□□□□□ -0.57
SF3B2-201ENST00000322535 UNC45AQ9H3U1 944 aa11.46□□□□□ -0.57
SF3B2-201ENST00000322535 TPX2Q9ULW0 747 aaKnown RBP11.46□□□□□ -0.57
SF3B2-201ENST00000322535 RBM8AQ9Y5S9 174 aaKnown RBP11.46□□□□□ -0.57
SF3B2-201ENST00000322535 CARMIL3Q8ND23 1372 aa11.46□□□□□ -0.57
SF3B2-201ENST00000322535 ROR2Q01974 943 aaKnown RBP11.46□□□□□ -0.57
SF3B2-201ENST00000322535 MYBPC3Q14896 1274 aa11.46□□□□□ -0.57
SF3B2-201ENST00000322535 NCAPHQ15003 741 aa11.46□□□□□ -0.57
SF3B2-201ENST00000322535 BLOC1S2Q6QNY1 142 aa11.46□□□□□ -0.57
SF3B2-201ENST00000322535 TMEM139Q8IV31 216 aa11.46□□□□□ -0.57
SF3B2-201ENST00000322535 SLC35F6Q8N357 371 aa11.46□□□□□ -0.57
SF3B2-201ENST00000322535 CCDC148Q8NFR7 591 aa11.46□□□□□ -0.57
SF3B2-201ENST00000322535 DHRS1Q96LJ7 313 aa11.46□□□□□ -0.57
SF3B2-201ENST00000322535 ALS2CR12Q96Q35 445 aa11.46□□□□□ -0.57
SF3B2-201ENST00000322535 GORASP1Q9BQQ3 440 aa11.46□□□□□ -0.57
SF3B2-201ENST00000322535 LRRC2Q9BYS8 371 aa11.46□□□□□ -0.57
SF3B2-201ENST00000322535 BATF3Q9NR55 127 aa11.46□□□□□ -0.57
SF3B2-201ENST00000322535 ABCF2Q9UG63 623 aa11.46□□□□□ -0.57
SF3B2-201ENST00000322535 MINPP1Q9UNW1 487 aa11.46□□□□□ -0.57
SF3B2-201ENST00000322535 TRPC6Q9Y210 931 aa11.46□□□□□ -0.57
SF3B2-201ENST00000322535 TMEM98Q9Y2Y6 226 aa11.46□□□□□ -0.57
SF3B2-201ENST00000322535 C4BP0C0L5 1744 aa11.46□□□□□ -0.58
SF3B2-201ENST00000322535 ANKRD36CQ5JPF3 1778 aa11.46□□□□□ -0.58
SF3B2-201ENST00000322535 CCDC175P0C221 793 aa11.46□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms