RNA–Protein interactions for RNA: ENST00000321442.9

SFXN1-201, Transcript of sideroflexin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SFXN1, Length 4,231 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-201ENST00000321442 POLD1P28340 1107 aa18.2■□□□□ 0.5
SFXN1-201ENST00000321442 KLHL30Q0D2K2 578 aa18.2■□□□□ 0.5
SFXN1-201ENST00000321442 GRIPAP1Q4V328 841 aa18.2■□□□□ 0.5
SFXN1-201ENST00000321442 TRIM58Q8NG06 486 aa18.2■□□□□ 0.5
SFXN1-201ENST00000321442 LMBR1Q8WVP7 490 aa18.2■□□□□ 0.5
SFXN1-201ENST00000321442 SLC39A2Q9NP94 309 aa18.2■□□□□ 0.5
SFXN1-201ENST00000321442 UTP3Q9NQZ2 479 aaKnown RBP eCLIP18.2■□□□□ 0.54e-6■■■■■ 72.1
SFXN1-201ENST00000321442 MYCNP04198 464 aaPredicted RBP18.2■□□□□ 0.5
SFXN1-201ENST00000321442 KRT71Q3SY84 523 aa18.2■□□□□ 0.5
SFXN1-201ENST00000321442 CCDC84Q86UT8 332 aaPredicted RBP18.2■□□□□ 0.5
SFXN1-201ENST00000321442 EYA3Q99504 573 aa18.2■□□□□ 0.5
SFXN1-201ENST00000321442 FUCA2Q9BTY2 467 aa18.2■□□□□ 0.5
SFXN1-201ENST00000321442 PKD2L1Q9P0L9 805 aa18.2■□□□□ 0.5
SFXN1-201ENST00000321442 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP18.2■□□□□ 0.5
SFXN1-201ENST00000321442 SRGAP2O75044 1071 aa18.2■□□□□ 0.5
SFXN1-201ENST00000321442 GJC1P36383 396 aa18.2■□□□□ 0.5
SFXN1-201ENST00000321442 PTF1AQ7RTS3 328 aa18.2■□□□□ 0.5
SFXN1-201ENST00000321442 SNX29Q8TEQ0 813 aa18.2■□□□□ 0.5
SFXN1-201ENST00000321442 TBC1D5Q92609 795 aa18.2■□□□□ 0.5
SFXN1-201ENST00000321442 USP40Q9NVE5 1235 aa18.2■□□□□ 0.5
SFXN1-201ENST00000321442 KIF28PB7ZC32 967 aa18.19■□□□□ 0.5
SFXN1-201ENST00000321442 RPS6KA4O75676 772 aa18.19■□□□□ 0.5
SFXN1-201ENST00000321442 ATG9AQ7Z3C6 839 aa18.19■□□□□ 0.5
SFXN1-201ENST00000321442 TUBGCP2Q9BSJ2 902 aa18.19■□□□□ 0.5
SFXN1-201ENST00000321442 SPATA31A1Q5TZJ5 1347 aa18.19■□□□□ 0.5
SFXN1-201ENST00000321442 MMP1P03956 469 aa18.19■□□□□ 0.5
SFXN1-201ENST00000321442 IRX5P78411 483 aaPredicted RBP18.19■□□□□ 0.5
SFXN1-201ENST00000321442 CUL5Q93034 780 aa18.19■□□□□ 0.5
SFXN1-201ENST00000321442 DYNLL2Q96FJ2 89 aa18.19■□□□□ 0.5
SFXN1-201ENST00000321442 UTP18Q9Y5J1 556 aaKnown RBP eCLIP18.19■□□□□ 0.5
SFXN1-201ENST00000321442 MST1RQ04912 1400 aa18.19■□□□□ 0.5
SFXN1-201ENST00000321442 SH2B2O14492 632 aaPredicted RBP18.19■□□□□ 0.5
SFXN1-201ENST00000321442 GTPBP6O43824 516 aaPredicted RBP18.19■□□□□ 0.5
SFXN1-201ENST00000321442 TADA3O75528 432 aa18.19■□□□□ 0.5
SFXN1-201ENST00000321442 CIAO1O76071 339 aa18.19■□□□□ 0.5
SFXN1-201ENST00000321442 PARP1P09874 1014 aaKnown RBP18.19■□□□□ 0.5
SFXN1-201ENST00000321442 A0A0G2JLW4 131 aa18.19■□□□□ 0.5
SFXN1-201ENST00000321442 IFNAR1P17181 557 aa18.19■□□□□ 0.5
SFXN1-201ENST00000321442 SP4Q02446 784 aa18.19■□□□□ 0.5
SFXN1-201ENST00000321442 GUCY2DQ02846 1103 aa18.19■□□□□ 0.5
SFXN1-201ENST00000321442 DAAM2Q86T65 1068 aa18.19■□□□□ 0.5
SFXN1-201ENST00000321442 CERKQ8TCT0 537 aa18.19■□□□□ 0.5
SFXN1-201ENST00000321442 FOXP1Q9H334 677 aaPredicted RBP18.19■□□□□ 0.5
SFXN1-201ENST00000321442 SAMD15Q9P1V8 674 aa18.19■□□□□ 0.5
SFXN1-201ENST00000321442 COL15A1P39059 1388 aa18.18■□□□□ 0.5
SFXN1-201ENST00000321442 USP17L8P0C7I0 530 aa18.18■□□□□ 0.5
SFXN1-201ENST00000321442 TECP42680 631 aa18.18■□□□□ 0.5
SFXN1-201ENST00000321442 PPP2R5BQ15173 497 aa18.18■□□□□ 0.5
SFXN1-201ENST00000321442 UBE3CQ15386 1083 aa18.18■□□□□ 0.5
SFXN1-201ENST00000321442 ZRSR2Q15696 482 aaKnown RBP18.18■□□□□ 0.5
SFXN1-201ENST00000321442 SHC4Q6S5L8 630 aa18.18■□□□□ 0.5
SFXN1-201ENST00000321442 ZSCAN10Q96SZ4 725 aaPredicted RBP18.18■□□□□ 0.5
SFXN1-201ENST00000321442 THRAP3Q9Y2W1 955 aaKnown RBP18.18■□□□□ 0.5
SFXN1-201ENST00000321442 CLRN2A0PK11 232 aa18.18■□□□□ 0.5
SFXN1-201ENST00000321442 MAP2K2P36507 400 aa18.18■□□□□ 0.5
SFXN1-201ENST00000321442 SLC7A5Q01650 507 aa18.18■□□□□ 0.5
SFXN1-201ENST00000321442 RPS6KA1Q15418 735 aa18.18■□□□□ 0.5
SFXN1-201ENST00000321442 LINC00116Q8NCU8 138 aa18.18■□□□□ 0.5
SFXN1-201ENST00000321442 ERMNQ8TAM6 284 aa18.18■□□□□ 0.5
SFXN1-201ENST00000321442 BAIAP2L1Q9UHR4 511 aa18.18■□□□□ 0.5
SFXN1-201ENST00000321442 ADD2P35612 726 aa18.18■□□□□ 0.5
SFXN1-201ENST00000321442 NONOQ15233 471 aaKnown RBP eCLIP18.18■□□□□ 0.5
SFXN1-201ENST00000321442 LRRC47Q8N1G4 583 aaKnown RBP18.18■□□□□ 0.5
SFXN1-201ENST00000321442 FBF1Q8TES7 1133 aa18.18■□□□□ 0.5
SFXN1-201ENST00000321442 MINPP1Q9UNW1 487 aa18.18■□□□□ 0.5
SFXN1-201ENST00000321442 MED23Q9ULK4 1368 aa18.17■□□□□ 0.5
SFXN1-201ENST00000321442 NCAPD2Q15021 1401 aa18.17■□□□□ 0.5
SFXN1-201ENST00000321442 COL3A1P02461 1466 aaPredicted RBP18.17■□□□□ 0.5
SFXN1-201ENST00000321442 BAG6P46379 1132 aa18.17■□□□□ 0.5
SFXN1-201ENST00000321442 C2orf54Q08AI8 447 aa18.17■□□□□ 0.5
SFXN1-201ENST00000321442 GPR108Q9NPR9 543 aa18.17■□□□□ 0.5
SFXN1-201ENST00000321442 NDUFA10O95299 355 aa18.17■□□□□ 0.5
SFXN1-201ENST00000321442 PRR29P0C7W0 189 aa18.17■□□□□ 0.5
SFXN1-201ENST00000321442 CTNNA2P26232 953 aa18.17■□□□□ 0.5
SFXN1-201ENST00000321442 BTDP43251 543 aa18.17■□□□□ 0.5
SFXN1-201ENST00000321442 BLIDQ8IZY5 108 aa18.17■□□□□ 0.5
SFXN1-201ENST00000321442 NSRP1Q9H0G5 558 aaKnown RBP18.17■□□□□ 0.5
SFXN1-201ENST00000321442 JRKLQ9Y4A0 524 aa18.17■□□□□ 0.5
SFXN1-201ENST00000321442 TRIM66O15016 1216 aa18.17■□□□□ 0.5
SFXN1-201ENST00000321442 RAD17O75943 681 aa18.17■□□□□ 0.5
SFXN1-201ENST00000321442 FMNL1O95466 1100 aaPredicted RBP18.17■□□□□ 0.5
SFXN1-201ENST00000321442 EN1Q05925 392 aaPredicted RBP18.17■□□□□ 0.5
SFXN1-201ENST00000321442 NFIXQ14938 502 aa18.17■□□□□ 0.5
SFXN1-201ENST00000321442 ADAT2Q7Z6V5 191 aaKnown RBP18.17■□□□□ 0.5
SFXN1-201ENST00000321442 CCDC26Q8TAB7 109 aa18.17■□□□□ 0.5
SFXN1-201ENST00000321442 PRDM4Q9UKN5 801 aa18.17■□□□□ 0.5
SFXN1-201ENST00000321442 HDAC9Q9UKV0 1011 aa18.17■□□□□ 0.5
SFXN1-201ENST00000321442 KCNK3O14649 394 aa18.16■□□□□ 0.5
SFXN1-201ENST00000321442 CCDC65Q8IXS2 484 aa18.16■□□□□ 0.5
SFXN1-201ENST00000321442 GSPT2Q8IYD1 628 aaKnown RBP18.16■□□□□ 0.5
SFXN1-201ENST00000321442 NLGN1Q8N2Q7 840 aa18.16■□□□□ 0.5
SFXN1-201ENST00000321442 RASAL2Q9UJF2 1139 aa18.16■□□□□ 0.5
SFXN1-201ENST00000321442 HYOU1Q9Y4L1 999 aa18.16■□□□□ 0.5
SFXN1-201ENST00000321442 SCG2P13521 617 aa18.16■□□□□ 0.5
SFXN1-201ENST00000321442 ARHGAP25P42331 645 aa18.16■□□□□ 0.5
SFXN1-201ENST00000321442 RASSF7Q02833 373 aa18.16■□□□□ 0.5
SFXN1-201ENST00000321442 EHHADHQ08426 723 aa18.16■□□□□ 0.5
SFXN1-201ENST00000321442 KRT31Q15323 416 aa18.16■□□□□ 0.5
SFXN1-201ENST00000321442 UHMK1Q8TAS1 419 aaKnown RBP18.16■□□□□ 0.5
SFXN1-201ENST00000321442 TCP10L2B9ZVM9 353 aa18.16■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 118.1 ms