RNA–Protein interactions for RNA: ENST00000319420.3

SHISA2-201, Transcript of shisa family member 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHISA2, Length 2,860 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA2-201ENST00000319420 SLC1A4P43007 532 aa18.07■□□□□ 0.48
SHISA2-201ENST00000319420 RBM26Q5T8P6 1007 aaKnown RBP18.07■□□□□ 0.48
SHISA2-201ENST00000319420 PSMD14O00487 310 aa18.06■□□□□ 0.48
SHISA2-201ENST00000319420 BMP15O95972 392 aa18.06■□□□□ 0.48
SHISA2-201ENST00000319420 UBA7P41226 1012 aa18.06■□□□□ 0.48
SHISA2-201ENST00000319420 STAT6P42226 847 aa18.06■□□□□ 0.48
SHISA2-201ENST00000319420 BAG6P46379 1132 aa18.06■□□□□ 0.48
SHISA2-201ENST00000319420 JAG1P78504 1218 aa18.06■□□□□ 0.48
SHISA2-201ENST00000319420 MIGA2Q7L4E1 593 aa18.06■□□□□ 0.48
SHISA2-201ENST00000319420 LZTS2Q9BRK4 669 aa18.06■□□□□ 0.48
SHISA2-201ENST00000319420 JMJD4Q9H9V9 463 aa18.06■□□□□ 0.48
SHISA2-201ENST00000319420 PI4KBQ9UBF8 816 aa18.06■□□□□ 0.48
SHISA2-201ENST00000319420 DLEC1Q9Y238 1755 aa18.06■□□□□ 0.48
SHISA2-201ENST00000319420 GH2P01242 217 aa18.06■□□□□ 0.48
SHISA2-201ENST00000319420 TXKP42681 527 aa18.06■□□□□ 0.48
SHISA2-201ENST00000319420 NONOQ15233 471 aaKnown RBP eCLIP18.06■□□□□ 0.48
SHISA2-201ENST00000319420 ZMYND12Q9H0C1 365 aa18.06■□□□□ 0.48
SHISA2-201ENST00000319420 SH3GLB2Q9NR46 395 aa18.06■□□□□ 0.48
SHISA2-201ENST00000319420 CDK5RAP2Q96SN8 1893 aa18.05■□□□□ 0.48
SHISA2-201ENST00000319420 ZBTB22O15209 634 aa18.05■□□□□ 0.48
SHISA2-201ENST00000319420 SKILP12757 684 aa18.05■□□□□ 0.48
SHISA2-201ENST00000319420 CD44P16070 742 aaKnown RBP18.05■□□□□ 0.48
SHISA2-201ENST00000319420 GNA11P29992 359 aa18.05■□□□□ 0.48
SHISA2-201ENST00000319420 IQUBQ8NA54 791 aa18.05■□□□□ 0.48
SHISA2-201ENST00000319420 SWAP70Q9UH65 585 aa18.05■□□□□ 0.48
SHISA2-201ENST00000319420 LTBP1Q14766 1721 aa18.05■□□□□ 0.48
SHISA2-201ENST00000319420 PPP1R11O60927 126 aaPredicted RBP18.05■□□□□ 0.48
SHISA2-201ENST00000319420 TRAPPC10P48553 1259 aa18.05■□□□□ 0.48
SHISA2-201ENST00000319420 ICA1Q05084 483 aa18.05■□□□□ 0.48
SHISA2-201ENST00000319420 ZNF543Q08ER8 600 aa18.05■□□□□ 0.48
SHISA2-201ENST00000319420 USH1GQ495M9 461 aa18.05■□□□□ 0.48
SHISA2-201ENST00000319420 CCDC84Q86UT8 332 aaPredicted RBP18.05■□□□□ 0.48
SHISA2-201ENST00000319420 POTEDQ86YR6 584 aa18.05■□□□□ 0.48
SHISA2-201ENST00000319420 MTRQ99707 1265 aa18.05■□□□□ 0.48
SHISA2-201ENST00000319420 M0R2N6 131 aa18.05■□□□□ 0.48
SHISA2-201ENST00000319420 CCZ1BP86790 482 aa18.05■□□□□ 0.48
SHISA2-201ENST00000319420 CCZ1P86791 482 aaPredicted RBP18.05■□□□□ 0.48
SHISA2-201ENST00000319420 C4orf32Q8N8J7 132 aa18.05■□□□□ 0.48
SHISA2-201ENST00000319420 ZNF592Q92610 1267 aa18.05■□□□□ 0.48
SHISA2-201ENST00000319420 SHTN1A0MZ66 631 aa18.04■□□□□ 0.48
SHISA2-201ENST00000319420 USP17L15C9J2P7 530 aa18.04■□□□□ 0.48
SHISA2-201ENST00000319420 USP17L13C9JLJ4 530 aa18.04■□□□□ 0.48
SHISA2-201ENST00000319420 USP17L11C9JVI0 530 aa18.04■□□□□ 0.48
SHISA2-201ENST00000319420 USP17L18D6R9N7 530 aa18.04■□□□□ 0.48
SHISA2-201ENST00000319420 USP17L22D6RA61 530 aa18.04■□□□□ 0.48
SHISA2-201ENST00000319420 USP17L17D6RBQ6 530 aa18.04■□□□□ 0.48
SHISA2-201ENST00000319420 USP17L19D6RCP7 530 aa18.04■□□□□ 0.48
SHISA2-201ENST00000319420 USP17L20D6RJB6 530 aa18.04■□□□□ 0.48
SHISA2-201ENST00000319420 IGSF3O75054 1194 aa18.04■□□□□ 0.48
SHISA2-201ENST00000319420 TDP2O95551 362 aa18.04■□□□□ 0.48
SHISA2-201ENST00000319420 TXLNAP40222 546 aa18.04■□□□□ 0.48
SHISA2-201ENST00000319420 USP17L24Q0WX57 530 aa18.04■□□□□ 0.48
SHISA2-201ENST00000319420 USP17L6PQ6QN14 398 aa18.04■□□□□ 0.48
SHISA2-201ENST00000319420 CCDC12Q8WUD4 166 aaPredicted RBP18.04■□□□□ 0.48
SHISA2-201ENST00000319420 MED15Q96RN5 788 aa18.04■□□□□ 0.48
SHISA2-201ENST00000319420 LRRC37AA6NMS7 1700 aa18.04■□□□□ 0.48
SHISA2-201ENST00000319420 MYRIPQ8NFW9 859 aa18.04■□□□□ 0.48
SHISA2-201ENST00000319420 CCDC34Q96HJ3 373 aa18.04■□□□□ 0.48
SHISA2-201ENST00000319420 NEMFO60524 1076 aa18.03■□□□□ 0.48
SHISA2-201ENST00000319420 ADCY7P51828 1080 aa18.03■□□□□ 0.48
SHISA2-201ENST00000319420 MORC3Q14149 939 aa18.03■□□□□ 0.48
SHISA2-201ENST00000319420 RRP1BQ14684 758 aaKnown RBP18.03■□□□□ 0.48
SHISA2-201ENST00000319420 ASPRV1Q53RT3 343 aa18.03■□□□□ 0.48
SHISA2-201ENST00000319420 SLFN13Q68D06 897 aa18.03■□□□□ 0.48
SHISA2-201ENST00000319420 KANK3Q6NY19 840 aa18.03■□□□□ 0.48
SHISA2-201ENST00000319420 NEK8Q86SG6 692 aa18.03■□□□□ 0.48
SHISA2-201ENST00000319420 OGFOD1Q8N543 542 aa18.03■□□□□ 0.48
SHISA2-201ENST00000319420 IKBKBO14920 756 aa18.03■□□□□ 0.48
SHISA2-201ENST00000319420 ABCB5Q2M3G0 1257 aa18.03■□□□□ 0.48
SHISA2-201ENST00000319420 RIOX1Q9H6W3 641 aa18.03■□□□□ 0.48
SHISA2-201ENST00000319420 IGKV6D-41A0A0C4DH26 115 aa18.02■□□□□ 0.48
SHISA2-201ENST00000319420 SARSP49591 514 aaKnown RBP18.02■□□□□ 0.48
SHISA2-201ENST00000319420 CCDC93Q567U6 631 aa18.02■□□□□ 0.48
SHISA2-201ENST00000319420 RRAGBQ5VZM2 374 aa18.02■□□□□ 0.48
SHISA2-201ENST00000319420 ARMCX5Q6P1M9 558 aa18.02■□□□□ 0.48
SHISA2-201ENST00000319420 SERPINA10Q9UK55 444 aa18.02■□□□□ 0.48
SHISA2-201ENST00000319420 CTNND2Q9UQB3 1225 aa18.02■□□□□ 0.48
SHISA2-201ENST00000319420 GDAQ9Y2T3 454 aa18.02■□□□□ 0.48
SHISA2-201ENST00000319420 MARCH6O60337 910 aa18.02■□□□□ 0.48
SHISA2-201ENST00000319420 TPD52L1Q16890 204 aaPredicted RBP18.02■□□□□ 0.48
SHISA2-201ENST00000319420 SLC37A4O43826 429 aa18.01■□□□□ 0.47
SHISA2-201ENST00000319420 ECE1P42892 770 aa18.01■□□□□ 0.47
SHISA2-201ENST00000319420 DPYDQ12882 1025 aa18.01■□□□□ 0.47
SHISA2-201ENST00000319420 DLGAP5Q15398 846 aa18.01■□□□□ 0.47
SHISA2-201ENST00000319420 KRT25Q7Z3Z0 450 aa18.01■□□□□ 0.47
SHISA2-201ENST00000319420 TMEM39BQ9GZU3 492 aa18.01■□□□□ 0.47
SHISA2-201ENST00000319420 DHX36Q9H2U1 1008 aaKnown RBP18.01■□□□□ 0.47
SHISA2-201ENST00000319420 XPO5Q9HAV4 1204 aaKnown RBP eCLIP18.01■□□□□ 0.47
SHISA2-201ENST00000319420 POTEMA6NI47 508 aa18.01■□□□□ 0.47
SHISA2-201ENST00000319420 F5H6K3 240 aa18.01■□□□□ 0.47
SHISA2-201ENST00000319420 RIOK3O14730 519 aaKnown RBP18.01■□□□□ 0.47
SHISA2-201ENST00000319420 OR52Z1P0C646 297 aa18.01■□□□□ 0.47
SHISA2-201ENST00000319420 KLRC3Q07444 240 aa18.01■□□□□ 0.47
SHISA2-201ENST00000319420 E2F4Q16254 413 aa18.01■□□□□ 0.47
SHISA2-201ENST00000319420 MLKLQ8NB16 471 aa18.01■□□□□ 0.47
SHISA2-201ENST00000319420 LRRC15Q8TF66 581 aa18.01■□□□□ 0.47
SHISA2-201ENST00000319420 PRIMPOLQ96LW4 560 aa18.01■□□□□ 0.47
SHISA2-201ENST00000319420 TMOD2Q9NZR1 351 aa18.01■□□□□ 0.47
SHISA2-201ENST00000319420 PCDHA1Q9Y5I3 950 aa18.01■□□□□ 0.47
SHISA2-201ENST00000319420 CC2D2BQ6DHV5 1058 aa18■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms