RNA–Protein interactions for RNA: ENST00000308521.9

APOBEC3F-201, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3F, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene APOBEC3F, Length 2,694 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3F-201ENST00000308521 NT5DC1Q5TFE4 455 aa11.65□□□□□ -0.54
APOBEC3F-201ENST00000308521 STRIP1Q5VSL9 837 aa11.65□□□□□ -0.54
APOBEC3F-201ENST00000308521 SPECC1LQ69YQ0 1117 aa11.65□□□□□ -0.54
APOBEC3F-201ENST00000308521 FOXP4Q8IVH2 680 aaPredicted RBP11.65□□□□□ -0.54
APOBEC3F-201ENST00000308521 ENOX1Q8TC92 643 aaKnown RBP11.65□□□□□ -0.54
APOBEC3F-201ENST00000308521 SLC16A10Q8TF71 515 aa11.65□□□□□ -0.54
APOBEC3F-201ENST00000308521 GOLGA1Q92805 767 aa11.65□□□□□ -0.54
APOBEC3F-201ENST00000308521 EXOC4Q96A65 974 aa11.65□□□□□ -0.54
APOBEC3F-201ENST00000308521 TRERF1Q96PN7 1200 aa11.65□□□□□ -0.54
APOBEC3F-201ENST00000308521 WDR24Q96S15 920 aa11.65□□□□□ -0.54
APOBEC3F-201ENST00000308521 DACH1Q9UI36 760 aa11.65□□□□□ -0.54
APOBEC3F-201ENST00000308521 KCNH3Q9ULD8 1083 aa11.65□□□□□ -0.54
APOBEC3F-201ENST00000308521 ZBTB12Q9Y330 459 aaPredicted RBP11.65□□□□□ -0.54
APOBEC3F-201ENST00000308521 PCDHA5Q9Y5H7 936 aa11.65□□□□□ -0.54
APOBEC3F-201ENST00000308521 FAM196BA6NMK8 535 aa11.64□□□□□ -0.55
APOBEC3F-201ENST00000308521 RASA1P20936 1047 aa11.64□□□□□ -0.55
APOBEC3F-201ENST00000308521 C10orf67Q8IYJ2 551 aa11.64□□□□□ -0.55
APOBEC3F-201ENST00000308521 LARGE2Q8N3Y3 721 aa11.64□□□□□ -0.55
APOBEC3F-201ENST00000308521 CRACR2BQ8N4Y2 399 aaPredicted RBP11.64□□□□□ -0.55
APOBEC3F-201ENST00000308521 MSL3Q8N5Y2 521 aaKnown RBP11.64□□□□□ -0.55
APOBEC3F-201ENST00000308521 MLKLQ8NB16 471 aa11.64□□□□□ -0.55
APOBEC3F-201ENST00000308521 CEP89Q96ST8 783 aa11.64□□□□□ -0.55
APOBEC3F-201ENST00000308521 TACO1Q9BSH4 297 aaKnown RBP11.64□□□□□ -0.55
APOBEC3F-201ENST00000308521 FUT8Q9BYC5 575 aa11.64□□□□□ -0.55
APOBEC3F-201ENST00000308521 PARD6BQ9BYG5 372 aa11.64□□□□□ -0.55
APOBEC3F-201ENST00000308521 MAST2Q6P0Q8 1798 aa11.64□□□□□ -0.55
APOBEC3F-201ENST00000308521 ADAMTSL1Q8N6G6 1762 aa11.64□□□□□ -0.55
APOBEC3F-201ENST00000308521 IFNAR1P17181 557 aa11.64□□□□□ -0.55
APOBEC3F-201ENST00000308521 TXLNAP40222 546 aa11.64□□□□□ -0.55
APOBEC3F-201ENST00000308521 EIF6P56537 245 aaKnown RBP11.64□□□□□ -0.55
APOBEC3F-201ENST00000308521 TUBB4BP68371 445 aa11.64□□□□□ -0.55
APOBEC3F-201ENST00000308521 GOLGA8FQ08AF8 430 aa11.64□□□□□ -0.55
APOBEC3F-201ENST00000308521 GOLGA8DPQ0D2H9 430 aa11.64□□□□□ -0.55
APOBEC3F-201ENST00000308521 TUBB2AQ13885 445 aa11.64□□□□□ -0.55
APOBEC3F-201ENST00000308521 CT47A1Q5JQC4 288 aaPredicted RBP11.64□□□□□ -0.55
APOBEC3F-201ENST00000308521 TMED8Q6PL24 325 aaPredicted RBP11.64□□□□□ -0.55
APOBEC3F-201ENST00000308521 CLEC10AQ8IUN9 316 aa11.64□□□□□ -0.55
APOBEC3F-201ENST00000308521 TRIML1Q8N9V2 468 aa11.64□□□□□ -0.55
APOBEC3F-201ENST00000308521 TUBB2BQ9BVA1 445 aa11.64□□□□□ -0.55
APOBEC3F-201ENST00000308521 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.64□□□□□ -0.55
APOBEC3F-201ENST00000308521 RRP15Q9Y3B9 282 aaKnown RBP11.64□□□□□ -0.55
APOBEC3F-201ENST00000308521 V9GY48 417 aaPredicted RBP11.64□□□□□ -0.55
APOBEC3F-201ENST00000308521 C10orf71Q711Q0 1435 aa11.64□□□□□ -0.55
APOBEC3F-201ENST00000308521 CCDC151A5D8V7 595 aa11.63□□□□□ -0.55
APOBEC3F-201ENST00000308521 VEGFAP15692 232 aaPredicted RBP11.63□□□□□ -0.55
APOBEC3F-201ENST00000308521 BMP6P22004 513 aa11.63□□□□□ -0.55
APOBEC3F-201ENST00000308521 HNRNPLLQ8WVV9 542 aaKnown RBP11.63□□□□□ -0.55
APOBEC3F-201ENST00000308521 PPM1EQ8WY54 764 aa11.63□□□□□ -0.55
APOBEC3F-201ENST00000308521 SMARCE1Q969G3 411 aa11.63□□□□□ -0.55
APOBEC3F-201ENST00000308521 ECM29Q5VYK3 1845 aa11.63□□□□□ -0.55
APOBEC3F-201ENST00000308521 STK36Q9NRP7 1315 aa11.63□□□□□ -0.55
APOBEC3F-201ENST00000308521 POTEB2H3BUK9 544 aa11.63□□□□□ -0.55
APOBEC3F-201ENST00000308521 MAP2K7O14733 419 aa11.63□□□□□ -0.55
APOBEC3F-201ENST00000308521 RPS6KA5O75582 802 aa11.63□□□□□ -0.55
APOBEC3F-201ENST00000308521 FMNL1O95466 1100 aaPredicted RBP11.63□□□□□ -0.55
APOBEC3F-201ENST00000308521 PCP11498 1178 aaKnown RBP11.63□□□□□ -0.55
APOBEC3F-201ENST00000308521 SARSP49591 514 aaKnown RBP11.63□□□□□ -0.55
APOBEC3F-201ENST00000308521 GNL2Q13823 731 aaKnown RBP11.63□□□□□ -0.55
APOBEC3F-201ENST00000308521 TOGARAM2Q6ZUX3 1019 aa11.63□□□□□ -0.55
APOBEC3F-201ENST00000308521 KRI1Q8N9T8 703 aaKnown RBP11.63□□□□□ -0.55
APOBEC3F-201ENST00000308521 CLIC6Q96NY7 704 aa11.63□□□□□ -0.55
APOBEC3F-201ENST00000308521 CPVLQ9H3G5 476 aa11.63□□□□□ -0.55
APOBEC3F-201ENST00000308521 RBM28Q9NW13 759 aaKnown RBP11.63□□□□□ -0.55
APOBEC3F-201ENST00000308521 MAN1B1Q9UKM7 699 aa11.63□□□□□ -0.55
APOBEC3F-201ENST00000308521 KIAA1551Q9HCM1 1747 aa11.63□□□□□ -0.55
APOBEC3F-201ENST00000308521 CPP00450 1065 aa11.63□□□□□ -0.55
APOBEC3F-201ENST00000308521 GOLGA8HP0CJ92 632 aa11.63□□□□□ -0.55
APOBEC3F-201ENST00000308521 CALRP27797 417 aaKnown RBP11.63□□□□□ -0.55
APOBEC3F-201ENST00000308521 TRIM29Q14134 588 aa11.63□□□□□ -0.55
APOBEC3F-201ENST00000308521 NR1I3Q14994 352 aa11.63□□□□□ -0.55
APOBEC3F-201ENST00000308521 TRIM22Q8IYM9 498 aa11.63□□□□□ -0.55
APOBEC3F-201ENST00000308521 STAG2Q8N3U4 1231 aa11.63□□□□□ -0.55
APOBEC3F-201ENST00000308521 PANX2Q96RD6 677 aa11.63□□□□□ -0.55
APOBEC3F-201ENST00000308521 TDRD3Q9H7E2 651 aaKnown RBP11.63□□□□□ -0.55
APOBEC3F-201ENST00000308521 KAT14Q9H8E8 782 aa11.63□□□□□ -0.55
APOBEC3F-201ENST00000308521 SUGT1Q9Y2Z0 365 aa11.63□□□□□ -0.55
APOBEC3F-201ENST00000308521 CCDC196A0A1B0GTZ2 297 aa11.62□□□□□ -0.55
APOBEC3F-201ENST00000308521 BTBD18B2RXH4 712 aa11.62□□□□□ -0.55
APOBEC3F-201ENST00000308521 TULP1O00294 542 aaPredicted RBP11.62□□□□□ -0.55
APOBEC3F-201ENST00000308521 POLD1P28340 1107 aa11.62□□□□□ -0.55
APOBEC3F-201ENST00000308521 MORC3Q14149 939 aa11.62□□□□□ -0.55
APOBEC3F-201ENST00000308521 HHIPL2Q6UWX4 724 aa11.62□□□□□ -0.55
APOBEC3F-201ENST00000308521 C16orf86Q6ZW13 317 aa11.62□□□□□ -0.55
APOBEC3F-201ENST00000308521 EGFL6Q8IUX8 553 aa11.62□□□□□ -0.55
APOBEC3F-201ENST00000308521 FAM177A1Q8N128 213 aaPredicted RBP11.62□□□□□ -0.55
APOBEC3F-201ENST00000308521 SRBD1Q8N5C6 995 aaKnown RBP11.62□□□□□ -0.55
APOBEC3F-201ENST00000308521 PDILTQ8N807 584 aa11.62□□□□□ -0.55
APOBEC3F-201ENST00000308521 PNMA1Q8ND90 353 aa11.62□□□□□ -0.55
APOBEC3F-201ENST00000308521 NEK11Q8NG66 645 aa11.62□□□□□ -0.55
APOBEC3F-201ENST00000308521 ZBTB9Q96C00 473 aa11.62□□□□□ -0.55
APOBEC3F-201ENST00000308521 PRMT6Q96LA8 375 aaPredicted RBP11.62□□□□□ -0.55
APOBEC3F-201ENST00000308521 MTA3Q9BTC8 594 aa11.62□□□□□ -0.55
APOBEC3F-201ENST00000308521 NAA15Q9BXJ9 866 aaKnown RBP11.62□□□□□ -0.55
APOBEC3F-201ENST00000308521 VPS54Q9P1Q0 977 aa11.62□□□□□ -0.55
APOBEC3F-201ENST00000308521 PIM2Q9P1W9 311 aa11.62□□□□□ -0.55
APOBEC3F-201ENST00000308521 SCAF8Q9UPN6 1271 aaKnown RBP11.62□□□□□ -0.55
APOBEC3F-201ENST00000308521 CDK5RAP2Q96SN8 1893 aa11.62□□□□□ -0.55
APOBEC3F-201ENST00000308521 PSMD14O00487 310 aa11.62□□□□□ -0.55
APOBEC3F-201ENST00000308521 POSTNQ15063 836 aa11.62□□□□□ -0.55
APOBEC3F-201ENST00000308521 LONRF2Q1L5Z9 754 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 66.1 ms