RNA–Protein interactions for RNA: ENST00000301599.6

TMEM88-201, Transcript of transmembrane protein 88, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM88, Length 875 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88-201ENST00000301599 ALPK3Q96L96 1907 aa21.52■■□□□ 1.04
TMEM88-201ENST00000301599 SNAI1O95863 264 aaPredicted RBP21.51■■□□□ 1.03
TMEM88-201ENST00000301599 AKR1A1P14550 325 aa21.51■■□□□ 1.03
TMEM88-201ENST00000301599 ADCYAP1R1P41586 468 aa21.51■■□□□ 1.03
TMEM88-201ENST00000301599 MAGEA10P43363 369 aaPredicted RBP21.51■■□□□ 1.03
TMEM88-201ENST00000301599 SLC39A5Q6ZMH5 540 aa21.51■■□□□ 1.03
TMEM88-201ENST00000301599 RNF180Q86T96 592 aa21.51■■□□□ 1.03
TMEM88-201ENST00000301599 AGBL1Q96MI9 1066 aa21.51■■□□□ 1.03
TMEM88-201ENST00000301599 TMEM47Q9BQJ4 181 aa21.51■■□□□ 1.03
TMEM88-201ENST00000301599 ACAD9Q9H845 621 aa21.51■■□□□ 1.03
TMEM88-201ENST00000301599 HOMER2Q9NSB8 354 aa21.51■■□□□ 1.03
TMEM88-201ENST00000301599 FAM184BQ9ULE4 1060 aa21.51■■□□□ 1.03
TMEM88-201ENST00000301599 PRR12Q9ULL5 1215 aa21.51■■□□□ 1.03
TMEM88-201ENST00000301599 ZNF536O15090 1300 aa21.51■■□□□ 1.03
TMEM88-201ENST00000301599 CCDC96Q2M329 555 aa21.5■■□□□ 1.03
TMEM88-201ENST00000301599 TRERF1Q96PN7 1200 aa21.5■■□□□ 1.03
TMEM88-201ENST00000301599 ALAS1P13196 640 aa21.49■■□□□ 1.03
TMEM88-201ENST00000301599 NT5C2P49902 561 aa21.49■■□□□ 1.03
TMEM88-201ENST00000301599 RTP1P59025 263 aa21.49■■□□□ 1.03
TMEM88-201ENST00000301599 CCDC174Q6PII3 467 aa21.49■■□□□ 1.03
TMEM88-201ENST00000301599 BTNL9Q6UXG8 535 aa21.49■■□□□ 1.03
TMEM88-201ENST00000301599 ESR2Q92731 530 aa21.49■■□□□ 1.03
TMEM88-201ENST00000301599 ABHD16BQ9H3Z7 469 aa21.49■■□□□ 1.03
TMEM88-201ENST00000301599 RNF146Q9NTX7 359 aa21.49■■□□□ 1.03
TMEM88-201ENST00000301599 PRKAG2Q9UGJ0 569 aa21.49■■□□□ 1.03
TMEM88-201ENST00000301599 POTEB2H3BUK9 544 aa21.48■■□□□ 1.03
TMEM88-201ENST00000301599 PGK1P00558 417 aa21.48■■□□□ 1.03
TMEM88-201ENST00000301599 ACVR2BQ13705 512 aa21.48■■□□□ 1.03
TMEM88-201ENST00000301599 FERMT2Q96AC1 680 aa21.48■■□□□ 1.03
TMEM88-201ENST00000301599 UBE2OQ9C0C9 1292 aaKnown RBP21.48■■□□□ 1.03
TMEM88-201ENST00000301599 CDKN2AIPQ9NXV6 580 aaPredicted RBP21.48■■□□□ 1.03
TMEM88-201ENST00000301599 CTNNA3Q9UI47 895 aa21.48■■□□□ 1.03
TMEM88-201ENST00000301599 PHF24Q9UPV7 400 aa21.48■■□□□ 1.03
TMEM88-201ENST00000301599 ATP11BQ9Y2G3 1177 aa21.48■■□□□ 1.03
TMEM88-201ENST00000301599 SMCHD1A6NHR9 2005 aa21.47■■□□□ 1.03
TMEM88-201ENST00000301599 SNAP25P60880 206 aa21.47■■□□□ 1.03
TMEM88-201ENST00000301599 CCDC178Q5BJE1 867 aa21.47■■□□□ 1.03
TMEM88-201ENST00000301599 TTBK2Q6IQ55 1244 aa21.47■■□□□ 1.03
TMEM88-201ENST00000301599 TBC1D10CQ8IV04 446 aa21.47■■□□□ 1.03
TMEM88-201ENST00000301599 LBHD1Q9BQE6 289 aaPredicted RBP21.47■■□□□ 1.03
TMEM88-201ENST00000301599 DSCC1Q9BVC3 393 aa21.47■■□□□ 1.03
TMEM88-201ENST00000301599 ZHX1Q9UKY1 873 aaPredicted RBP21.47■■□□□ 1.03
TMEM88-201ENST00000301599 FRMPD3Q5JV73 1810 aa21.46■■□□□ 1.03
TMEM88-201ENST00000301599 PLXNA1Q9UIW2 1896 aa21.46■■□□□ 1.03
TMEM88-201ENST00000301599 SLC16A2P36021 539 aa21.46■■□□□ 1.03
TMEM88-201ENST00000301599 CNTN2Q02246 1040 aa21.46■■□□□ 1.03
TMEM88-201ENST00000301599 SYDE2Q5VT97 1194 aa21.46■■□□□ 1.03
TMEM88-201ENST00000301599 C1orf53Q5VUE5 145 aa21.46■■□□□ 1.03
TMEM88-201ENST00000301599 ARMCX2Q7L311 632 aa21.46■■□□□ 1.03
TMEM88-201ENST00000301599 RASGRP2Q7LDG7 609 aa21.46■■□□□ 1.03
TMEM88-201ENST00000301599 FAM133AQ8N9E0 248 aa21.46■■□□□ 1.03
TMEM88-201ENST00000301599 FGD4Q96M96 766 aa21.46■■□□□ 1.03
TMEM88-201ENST00000301599 TSEN34Q9BSV6 310 aaKnown RBP21.46■■□□□ 1.03
TMEM88-201ENST00000301599 GPCPD1Q9NPB8 672 aa21.46■■□□□ 1.03
TMEM88-201ENST00000301599 A1CFQ9NQ94 594 aaKnown RBP21.46■■□□□ 1.03
TMEM88-201ENST00000301599 CCPG1Q9ULG6 757 aa21.46■■□□□ 1.03
TMEM88-201ENST00000301599 ASB14A6NK59 587 aa21.45■■□□□ 1.02
TMEM88-201ENST00000301599 DUSP11O75319 330 aaKnown RBP21.45■■□□□ 1.02
TMEM88-201ENST00000301599 ICAM1P05362 532 aa21.45■■□□□ 1.02
TMEM88-201ENST00000301599 PDE4AP27815 886 aa21.45■■□□□ 1.02
TMEM88-201ENST00000301599 MDM2Q00987 491 aaPredicted RBP21.45■■□□□ 1.02
TMEM88-201ENST00000301599 SNX17Q15036 470 aa21.45■■□□□ 1.02
TMEM88-201ENST00000301599 IMMTQ16891 758 aaKnown RBP21.45■■□□□ 1.02
TMEM88-201ENST00000301599 DGKHQ86XP1 1220 aa21.45■■□□□ 1.02
TMEM88-201ENST00000301599 CCDC144CPQ8IYA2 1237 aa21.45■■□□□ 1.02
TMEM88-201ENST00000301599 TDHQ8IZJ6 230 aa21.45■■□□□ 1.02
TMEM88-201ENST00000301599 RANBP17Q9H2T7 1088 aaKnown RBP21.45■■□□□ 1.02
TMEM88-201ENST00000301599 PNMA2Q9UL42 364 aa21.45■■□□□ 1.02
TMEM88-201ENST00000301599 RANBP2P49792 3224 aaKnown RBP21.45■■□□□ 1.02
TMEM88-201ENST00000301599 ADAMTS4O75173 837 aa21.44■■□□□ 1.02
TMEM88-201ENST00000301599 PDHBP11177 359 aa21.44■■□□□ 1.02
TMEM88-201ENST00000301599 IRX6P78412 446 aaPredicted RBP21.44■■□□□ 1.02
TMEM88-201ENST00000301599 CCDC144BQ3MJ40 725 aa21.44■■□□□ 1.02
TMEM88-201ENST00000301599 TTC22Q5TAA0 569 aa21.44■■□□□ 1.02
TMEM88-201ENST00000301599 IQCA1Q86XH1 822 aa21.44■■□□□ 1.02
TMEM88-201ENST00000301599 SOWAHBA6NEL2 793 aa21.43■■□□□ 1.02
TMEM88-201ENST00000301599 ZNF543Q08ER8 600 aa21.43■■□□□ 1.02
TMEM88-201ENST00000301599 TRIM60Q495X7 471 aa21.43■■□□□ 1.02
TMEM88-201ENST00000301599 MUM1L1Q5H9M0 696 aa21.43■■□□□ 1.02
TMEM88-201ENST00000301599 KLHDC9Q8NEP7 349 aa21.43■■□□□ 1.02
TMEM88-201ENST00000301599 ZKSCAN3Q9BRR0 538 aa21.43■■□□□ 1.02
TMEM88-201ENST00000301599 SPC25Q9HBM1 224 aa21.43■■□□□ 1.02
TMEM88-201ENST00000301599 NEDD4P46934 1319 aa21.43■■□□□ 1.02
TMEM88-201ENST00000301599 FRMPD2Q68DX3 1309 aaPredicted RBP21.43■■□□□ 1.02
TMEM88-201ENST00000301599 KDM4AO75164 1064 aa21.42■■□□□ 1.02
TMEM88-201ENST00000301599 SNHG28P0DPA3 235 aa21.42■■□□□ 1.02
TMEM88-201ENST00000301599 NSMFQ6X4W1 530 aa21.42■■□□□ 1.02
TMEM88-201ENST00000301599 NUP133Q8WUM0 1156 aa21.42■■□□□ 1.02
TMEM88-201ENST00000301599 ANKS1AQ92625 1134 aa21.42■■□□□ 1.02
TMEM88-201ENST00000301599 LENG1Q96BZ8 264 aaPredicted RBP21.42■■□□□ 1.02
TMEM88-201ENST00000301599 KRT23Q9C075 422 aa21.42■■□□□ 1.02
TMEM88-201ENST00000301599 CYP39A1Q9NYL5 469 aa21.42■■□□□ 1.02
TMEM88-201ENST00000301599 SYNRGQ9UMZ2 1314 aa21.41■■□□□ 1.02
TMEM88-201ENST00000301599 A0A1W2PQ45 241 aaPredicted RBP21.41■■□□□ 1.02
TMEM88-201ENST00000301599 A0A1W2PQY0 241 aa21.41■■□□□ 1.02
TMEM88-201ENST00000301599 MOXD2PA6NHM9 499 aa21.41■■□□□ 1.02
TMEM88-201ENST00000301599 SOX1O00570 391 aaPredicted RBP21.41■■□□□ 1.02
TMEM88-201ENST00000301599 ACLYP53396 1101 aa21.41■■□□□ 1.02
TMEM88-201ENST00000301599 TLE2Q04725 743 aa21.41■■□□□ 1.02
TMEM88-201ENST00000301599 KCNA10Q16322 511 aa21.41■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms