RNA–Protein interactions for RNA: ENST00000265565.9

SCAP-201, Transcript of SREBF chaperone, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCAP, Length 4,394 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAP-201ENST00000265565 EPB41L5Q9HCM4 733 aa18.37■□□□□ 0.53
SCAP-201ENST00000265565 CUL4BQ13620 913 aa18.37■□□□□ 0.53
SCAP-201ENST00000265565 NAA35Q5VZE5 725 aa18.37■□□□□ 0.53
SCAP-201ENST00000265565 MAEAQ7L5Y9 396 aa18.37■□□□□ 0.53
SCAP-201ENST00000265565 RDH13Q8NBN7 331 aa18.37■□□□□ 0.53
SCAP-201ENST00000265565 EYA3Q99504 573 aa18.37■□□□□ 0.53
SCAP-201ENST00000265565 ARPP21Q9UBL0 812 aaPredicted RBP18.37■□□□□ 0.53
SCAP-201ENST00000265565 RWDD2AQ9UIY3 292 aa18.37■□□□□ 0.53
SCAP-201ENST00000265565 GNPATO15228 680 aa18.37■□□□□ 0.53
SCAP-201ENST00000265565 E2F4Q16254 413 aa18.37■□□□□ 0.53
SCAP-201ENST00000265565 NYAP1Q6ZVC0 841 aa18.37■□□□□ 0.53
SCAP-201ENST00000265565 P2RX5Q93086 422 aa18.37■□□□□ 0.53
SCAP-201ENST00000265565 FRMD4BQ9Y2L6 1034 aa18.37■□□□□ 0.53
SCAP-201ENST00000265565 CPS1P31327 1500 aa18.36■□□□□ 0.53
SCAP-201ENST00000265565 TRIM49BA6NDI0 452 aa18.36■□□□□ 0.53
SCAP-201ENST00000265565 ENGASEQ8NFI3 743 aa18.36■□□□□ 0.53
SCAP-201ENST00000265565 WDR66Q8TBY9 1149 aa18.36■□□□□ 0.53
SCAP-201ENST00000265565 U2AF1L4Q8WU68 220 aaKnown RBP18.36■□□□□ 0.53
SCAP-201ENST00000265565 CTTNBP2NLQ9P2B4 639 aa18.36■□□□□ 0.53
SCAP-201ENST00000265565 RTCBQ9Y3I0 505 aaKnown RBP18.36■□□□□ 0.53
SCAP-201ENST00000265565 UBN2Q6ZU65 1347 aa18.36■□□□□ 0.53
SCAP-201ENST00000265565 MYO3AQ8NEV4 1616 aa18.36■□□□□ 0.53
SCAP-201ENST00000265565 KRIT1O00522 736 aa18.36■□□□□ 0.53
SCAP-201ENST00000265565 UFL1O94874 794 aa18.36■□□□□ 0.53
SCAP-201ENST00000265565 MOCS3O95396 460 aa18.36■□□□□ 0.53
SCAP-201ENST00000265565 TCP11X2Q5H9J9 407 aa18.36■□□□□ 0.53
SCAP-201ENST00000265565 HEG1Q9ULI3 1381 aa18.36■□□□□ 0.53
SCAP-201ENST00000265565 DDAH1O94760 285 aa18.36■□□□□ 0.53
SCAP-201ENST00000265565 ST5P78524 1137 aa18.36■□□□□ 0.53
SCAP-201ENST00000265565 ARHGAP44Q17R89 818 aa18.36■□□□□ 0.53
SCAP-201ENST00000265565 MRRFQ96E11 262 aaKnown RBP18.36■□□□□ 0.53
SCAP-201ENST00000265565 NHEJ1Q9H9Q4 299 aaPredicted RBP18.36■□□□□ 0.53
SCAP-201ENST00000265565 REREQ9P2R6 1566 aa18.35■□□□□ 0.53
SCAP-201ENST00000265565 GUCY1A2P33402 732 aa18.35■□□□□ 0.53
SCAP-201ENST00000265565 SEL1L2Q5TEA6 688 aa18.35■□□□□ 0.53
SCAP-201ENST00000265565 GSPT2Q8IYD1 628 aaKnown RBP18.35■□□□□ 0.53
SCAP-201ENST00000265565 MRFAP1Q9Y605 127 aa18.35■□□□□ 0.53
SCAP-201ENST00000265565 HEXIM1O94992 359 aaKnown RBP18.35■□□□□ 0.53
SCAP-201ENST00000265565 ZBTB16Q05516 673 aa18.35■□□□□ 0.53
SCAP-201ENST00000265565 ATG9AQ7Z3C6 839 aa18.35■□□□□ 0.53
SCAP-201ENST00000265565 SMCR8Q8TEV9 937 aaPredicted RBP18.35■□□□□ 0.53
SCAP-201ENST00000265565 NAP1L3Q99457 506 aaPredicted RBP18.35■□□□□ 0.53
SCAP-201ENST00000265565 NUCKS1Q9H1E3 243 aaKnown RBP18.35■□□□□ 0.53
SCAP-201ENST00000265565 HDAC6Q9UBN7 1215 aa18.35■□□□□ 0.53
SCAP-201ENST00000265565 IKBKGQ9Y6K9 419 aa18.35■□□□□ 0.53
SCAP-201ENST00000265565 CHD1O14646 1710 aa18.35■□□□□ 0.53
SCAP-201ENST00000265565 FRMPD2Q68DX3 1309 aaPredicted RBP18.35■□□□□ 0.53
SCAP-201ENST00000265565 GCNT3O95395 438 aa18.35■□□□□ 0.53
SCAP-201ENST00000265565 MAP2K2P36507 400 aa18.35■□□□□ 0.53
SCAP-201ENST00000265565 TRAPPC10P48553 1259 aa18.35■□□□□ 0.53
SCAP-201ENST00000265565 FMR1Q06787 632 aaKnown RBP eCLIP18.35■□□□□ 0.53
SCAP-201ENST00000265565 LY9Q9HBG7 655 aa18.35■□□□□ 0.53
SCAP-201ENST00000265565 ABHD10Q9NUJ1 306 aa18.35■□□□□ 0.53
SCAP-201ENST00000265565 PCDHA12Q9UN75 941 aa18.35■□□□□ 0.53
SCAP-201ENST00000265565 EIF4A3P38919 411 aaKnown RBP18.34■□□□□ 0.53
SCAP-201ENST00000265565 ZBED6P86452 979 aa18.34■□□□□ 0.53
SCAP-201ENST00000265565 HAUS3Q68CZ6 603 aa18.34■□□□□ 0.53
SCAP-201ENST00000265565 USP49Q70CQ1 688 aa18.34■□□□□ 0.53
SCAP-201ENST00000265565 DNM3Q9UQ16 869 aa18.34■□□□□ 0.53
SCAP-201ENST00000265565 IFT88Q13099 833 aa18.34■□□□□ 0.53
SCAP-201ENST00000265565 HLFQ16534 295 aa18.34■□□□□ 0.53
SCAP-201ENST00000265565 FTCDO95954 541 aa18.34■□□□□ 0.53
SCAP-201ENST00000265565 FAM26FQ5R3K3 315 aa18.34■□□□□ 0.53
SCAP-201ENST00000265565 GPBP1Q86WP2 473 aa18.34■□□□□ 0.53
SCAP-201ENST00000265565 LZTS2Q9BRK4 669 aa18.34■□□□□ 0.53
SCAP-201ENST00000265565 SLTMQ9NWH9 1034 aaKnown RBP eCLIP18.34■□□□□ 0.53
SCAP-201ENST00000265565 PRPF3O43395 683 aaKnown RBP18.33■□□□□ 0.53
SCAP-201ENST00000265565 MRPL44Q9H9J2 332 aaKnown RBP18.33■□□□□ 0.53
SCAP-201ENST00000265565 FOXO4P98177 505 aa18.33■□□□□ 0.53
SCAP-201ENST00000265565 MGARPQ8TDB4 240 aa18.33■□□□□ 0.53
SCAP-201ENST00000265565 DHTKD1Q96HY7 919 aaPredicted RBP18.33■□□□□ 0.53
SCAP-201ENST00000265565 CEP152O94986 1710 aa18.33■□□□□ 0.52
SCAP-201ENST00000265565 MB21D1Q8N884 522 aa18.33■□□□□ 0.52
SCAP-201ENST00000265565 PPIL4Q8WUA2 492 aaKnown RBP eCLIP18.33■□□□□ 0.52
SCAP-201ENST00000265565 IQCDQ96DY2 449 aa18.33■□□□□ 0.52
SCAP-201ENST00000265565 RSRC1Q96IZ7 334 aaKnown RBP18.33■□□□□ 0.52
SCAP-201ENST00000265565 ARMCX3Q9UH62 379 aaPredicted RBP18.33■□□□□ 0.52
SCAP-201ENST00000265565 SWAP70Q9UH65 585 aa18.33■□□□□ 0.52
SCAP-201ENST00000265565 JRKLQ9Y4A0 524 aa18.33■□□□□ 0.52
SCAP-201ENST00000265565 ST3GAL1Q11201 340 aa18.33■□□□□ 0.52
SCAP-201ENST00000265565 NKIRAS1Q9NYS0 192 aa18.33■□□□□ 0.52
SCAP-201ENST00000265565 ARAP3Q8WWN8 1544 aa18.32■□□□□ 0.52
SCAP-201ENST00000265565 VSNL1P62760 191 aa18.32■□□□□ 0.52
SCAP-201ENST00000265565 CCDC105Q8IYK2 499 aa18.32■□□□□ 0.52
SCAP-201ENST00000265565 ASIC3Q9UHC3 531 aa18.32■□□□□ 0.52
SCAP-201ENST00000265565 SLC1A4P43007 532 aa18.32■□□□□ 0.52
SCAP-201ENST00000265565 EPHB4P54760 987 aa18.32■□□□□ 0.52
SCAP-201ENST00000265565 ADAM9Q13443 819 aa18.32■□□□□ 0.52
SCAP-201ENST00000265565 USH1GQ495M9 461 aa18.32■□□□□ 0.52
SCAP-201ENST00000265565 HOMER2Q9NSB8 354 aa18.32■□□□□ 0.52
SCAP-201ENST00000265565 NBPF26B4DH59 902 aa18.32■□□□□ 0.52
SCAP-201ENST00000265565 XRCC5P13010 732 aaKnown RBP18.32■□□□□ 0.52
SCAP-201ENST00000265565 CCNE1P24864 410 aa18.32■□□□□ 0.52
SCAP-201ENST00000265565 CLNS1AP54105 237 aaKnown RBP18.32■□□□□ 0.52
SCAP-201ENST00000265565 NBPF10Q6P3W6 841 aaKnown RBP18.32■□□□□ 0.52
SCAP-201ENST00000265565 CACNA2D3Q8IZS8 1091 aa18.32■□□□□ 0.52
SCAP-201ENST00000265565 LRRC47Q8N1G4 583 aaKnown RBP18.32■□□□□ 0.52
SCAP-201ENST00000265565 NBPF15Q8N660 670 aa18.32■□□□□ 0.52
SCAP-201ENST00000265565 MYCT1Q8N699 235 aa18.32■□□□□ 0.52
SCAP-201ENST00000265565 PPRC1Q5VV67 1664 aaKnown RBP18.31■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 95 ms