RNA–Protein interactions for RNA: ENST00000263228.3

UBE2R2-201, Transcript of ubiquitin conjugating enzyme E2 R2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE2R2, Length 4,075 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2R2-201ENST00000263228 MED23Q9ULK4 1368 aa18.63■□□□□ 0.57
UBE2R2-201ENST00000263228 TTC26A0AVF1 554 aa18.63■□□□□ 0.57
UBE2R2-201ENST00000263228 GGCXP38435 758 aa18.63■□□□□ 0.57
UBE2R2-201ENST00000263228 PPFIA1Q13136 1202 aa18.63■□□□□ 0.57
UBE2R2-201ENST00000263228 UBE3CQ15386 1083 aa18.63■□□□□ 0.57
UBE2R2-201ENST00000263228 MLXIPQ9HAP2 919 aa18.63■□□□□ 0.57
UBE2R2-201ENST00000263228 PACSIN2Q9UNF0 486 aaPredicted RBP18.63■□□□□ 0.57
UBE2R2-201ENST00000263228 JRKLQ9Y4A0 524 aa18.63■□□□□ 0.57
UBE2R2-201ENST00000263228 SRPRBQ9Y5M8 271 aaKnown RBP18.63■□□□□ 0.57
UBE2R2-201ENST00000263228 LDHCP07864 332 aa18.62■□□□□ 0.57
UBE2R2-201ENST00000263228 DNM2P50570 870 aa18.62■□□□□ 0.57
UBE2R2-201ENST00000263228 NONOQ15233 471 aaKnown RBP eCLIP18.62■□□□□ 0.57
UBE2R2-201ENST00000263228 DDB1Q16531 1140 aa18.62■□□□□ 0.57
UBE2R2-201ENST00000263228 CFAP221Q4G0U5 840 aa18.62■□□□□ 0.57
UBE2R2-201ENST00000263228 LRRC47Q8N1G4 583 aaKnown RBP18.62■□□□□ 0.57
UBE2R2-201ENST00000263228 TBC1D31Q96DN5 1066 aa18.62■□□□□ 0.57
UBE2R2-201ENST00000263228 LSM14BQ9BX40 385 aaKnown RBP18.62■□□□□ 0.57
UBE2R2-201ENST00000263228 GTPBP6O43824 516 aaPredicted RBP18.62■□□□□ 0.57
UBE2R2-201ENST00000263228 PCCAP05165 728 aaPredicted RBP18.62■□□□□ 0.57
UBE2R2-201ENST00000263228 CYP2C19P33261 490 aa18.62■□□□□ 0.57
UBE2R2-201ENST00000263228 MKRN1Q9UHC7 482 aaKnown RBP18.62■□□□□ 0.57
UBE2R2-201ENST00000263228 A0A0U1RQJ8 604 aa18.61■□□□□ 0.57
UBE2R2-201ENST00000263228 A0A1W2PRG0 241 aa18.61■□□□□ 0.57
UBE2R2-201ENST00000263228 EIF3CLB5ME19 914 aaKnown RBP18.61■□□□□ 0.57
UBE2R2-201ENST00000263228 H7C1D1 291 aa18.61■□□□□ 0.57
UBE2R2-201ENST00000263228 ZYXQ15942 572 aaKnown RBP18.61■□□□□ 0.57
UBE2R2-201ENST00000263228 USH1GQ495M9 461 aa18.61■□□□□ 0.57
UBE2R2-201ENST00000263228 CNNM4Q6P4Q7 775 aa18.61■□□□□ 0.57
UBE2R2-201ENST00000263228 PAXIP1Q6ZW49 1069 aaPredicted RBP18.61■□□□□ 0.57
UBE2R2-201ENST00000263228 TC2NQ8N9U0 490 aa18.61■□□□□ 0.57
UBE2R2-201ENST00000263228 TRIML1Q8N9V2 468 aa18.61■□□□□ 0.57
UBE2R2-201ENST00000263228 EIF3CQ99613 913 aaKnown RBP18.61■□□□□ 0.57
UBE2R2-201ENST00000263228 FOXP1Q9H334 677 aaPredicted RBP18.61■□□□□ 0.57
UBE2R2-201ENST00000263228 MRFAP1Q9Y605 127 aa18.61■□□□□ 0.57
UBE2R2-201ENST00000263228 OVOS2A0A0J9YW53 1432 aa18.61■□□□□ 0.57
UBE2R2-201ENST00000263228 OVOS2Q6IE36 1432 aa18.61■□□□□ 0.57
UBE2R2-201ENST00000263228 KLRF2D3W0D1 207 aa18.61■□□□□ 0.57
UBE2R2-201ENST00000263228 USP17L8P0C7I0 530 aa18.61■□□□□ 0.57
UBE2R2-201ENST00000263228 CTNNA1P35221 906 aaKnown RBP18.61■□□□□ 0.57
UBE2R2-201ENST00000263228 CYP4A11Q02928 519 aa18.61■□□□□ 0.57
UBE2R2-201ENST00000263228 TCP10Q12799 353 aa18.61■□□□□ 0.57
UBE2R2-201ENST00000263228 RPS6KA1Q15418 735 aa18.61■□□□□ 0.57
UBE2R2-201ENST00000263228 USP17L3A6NCW0 530 aa18.61■□□□□ 0.57
UBE2R2-201ENST00000263228 USP17L4A6NCW7 530 aa18.61■□□□□ 0.57
UBE2R2-201ENST00000263228 PRCPP42785 496 aa18.61■□□□□ 0.57
UBE2R2-201ENST00000263228 FAM182BQ5T319 152 aa18.61■□□□□ 0.57
UBE2R2-201ENST00000263228 USP17L1Q7RTZ2 530 aa18.61■□□□□ 0.57
UBE2R2-201ENST00000263228 GPR101Q96P66 508 aaPredicted RBP18.61■□□□□ 0.57
UBE2R2-201ENST00000263228 FHOD1Q9Y613 1164 aa18.61■□□□□ 0.57
UBE2R2-201ENST00000263228 EIF4A3P38919 411 aaKnown RBP18.6■□□□□ 0.57
UBE2R2-201ENST00000263228 ZKSCAN7Q9P0L1 754 aaPredicted RBP18.6■□□□□ 0.57
UBE2R2-201ENST00000263228 ATP1A1P05023 1023 aaKnown RBP18.6■□□□□ 0.57
UBE2R2-201ENST00000263228 CALCRLQ16602 461 aa18.6■□□□□ 0.57
UBE2R2-201ENST00000263228 LY9Q9HBG7 655 aa18.6■□□□□ 0.57
UBE2R2-201ENST00000263228 NFU1Q9UMS0 254 aa18.6■□□□□ 0.57
UBE2R2-201ENST00000263228 GCOM1H8Y6P7 765 aaPredicted RBP18.6■□□□□ 0.57
UBE2R2-201ENST00000263228 HEXIM1O94992 359 aaKnown RBP18.6■□□□□ 0.57
UBE2R2-201ENST00000263228 MYZAPP0CAP1 466 aa18.6■□□□□ 0.57
UBE2R2-201ENST00000263228 EZRP15311 586 aaKnown RBP18.6■□□□□ 0.57
UBE2R2-201ENST00000263228 RFC4P35249 363 aa18.6■□□□□ 0.57
UBE2R2-201ENST00000263228 FOXO4P98177 505 aa18.6■□□□□ 0.57
UBE2R2-201ENST00000263228 PLCB3Q01970 1234 aa18.6■□□□□ 0.57
UBE2R2-201ENST00000263228 TMC4Q7Z404 712 aa18.6■□□□□ 0.57
UBE2R2-201ENST00000263228 SH2D3CQ8N5H7 860 aa18.6■□□□□ 0.57
UBE2R2-201ENST00000263228 CCDC155Q8N6L0 562 aa18.6■□□□□ 0.57
UBE2R2-201ENST00000263228 JPH2Q9BR39 696 aaPredicted RBP18.6■□□□□ 0.57
UBE2R2-201ENST00000263228 NHEJ1Q9H9Q4 299 aaPredicted RBP18.6■□□□□ 0.57
UBE2R2-201ENST00000263228 STK38LQ9Y2H1 464 aa18.6■□□□□ 0.57
UBE2R2-201ENST00000263228 TCHHQ07283 1943 aa18.6■□□□□ 0.57
UBE2R2-201ENST00000263228 RIMS1Q86UR5 1692 aaKnown RBP18.6■□□□□ 0.57
UBE2R2-201ENST00000263228 DDX39AO00148 427 aaKnown RBP18.59■□□□□ 0.57
UBE2R2-201ENST00000263228 CAPN12Q6ZSI9 719 aa18.59■□□□□ 0.57
UBE2R2-201ENST00000263228 ZNF526Q8TF50 670 aaPredicted RBP18.59■□□□□ 0.57
UBE2R2-201ENST00000263228 ABHD10Q9NUJ1 306 aa18.59■□□□□ 0.57
UBE2R2-201ENST00000263228 CEP170BQ9Y4F5 1589 aaPredicted RBP18.59■□□□□ 0.57
UBE2R2-201ENST00000263228 DIXDC1Q155Q3 683 aa18.59■□□□□ 0.57
UBE2R2-201ENST00000263228 PEX26Q7Z412 305 aa18.59■□□□□ 0.57
UBE2R2-201ENST00000263228 NLRP10Q86W26 655 aa18.59■□□□□ 0.57
UBE2R2-201ENST00000263228 ANKRD42Q8N9B4 389 aa18.59■□□□□ 0.57
UBE2R2-201ENST00000263228 EIF4E1BA6NMX2 242 aaKnown RBP18.59■□□□□ 0.57
UBE2R2-201ENST00000263228 KIF4AO95239 1232 aa18.59■□□□□ 0.57
UBE2R2-201ENST00000263228 SFMBT2Q5VUG0 894 aa18.59■□□□□ 0.57
UBE2R2-201ENST00000263228 USP17L2Q6R6M4 530 aa18.59■□□□□ 0.57
UBE2R2-201ENST00000263228 GIGYF2Q6Y7W6 1299 aaKnown RBP18.59■□□□□ 0.57
UBE2R2-201ENST00000263228 TRIM58Q8NG06 486 aa18.59■□□□□ 0.57
UBE2R2-201ENST00000263228 NGLY1Q96IV0 654 aa18.59■□□□□ 0.57
UBE2R2-201ENST00000263228 AP1M1Q9BXS5 423 aa18.59■□□□□ 0.57
UBE2R2-201ENST00000263228 ADAMTS1Q9UHI8 967 aa18.59■□□□□ 0.57
UBE2R2-201ENST00000263228 USP31Q70CQ4 1352 aa18.59■□□□□ 0.57
UBE2R2-201ENST00000263228 ARFGAP2Q8N6H7 521 aa18.59■□□□□ 0.57
UBE2R2-201ENST00000263228 SLC44A5Q8NCS7 719 aa18.59■□□□□ 0.57
UBE2R2-201ENST00000263228 U2AF1L4Q8WU68 220 aaKnown RBP18.59■□□□□ 0.57
UBE2R2-201ENST00000263228 CCDC51Q96ER9 411 aa18.59■□□□□ 0.57
UBE2R2-201ENST00000263228 MYO1AQ9UBC5 1043 aa18.59■□□□□ 0.57
UBE2R2-201ENST00000263228 EEF2P13639 858 aaKnown RBP18.58■□□□□ 0.57
UBE2R2-201ENST00000263228 CTNNA2P26232 953 aa18.58■□□□□ 0.57
UBE2R2-201ENST00000263228 ASIC2Q16515 512 aa18.58■□□□□ 0.57
UBE2R2-201ENST00000263228 USPL1Q5W0Q7 1092 aa18.58■□□□□ 0.57
UBE2R2-201ENST00000263228 REXO1Q8N1G1 1221 aaKnown RBP18.58■□□□□ 0.57
UBE2R2-201ENST00000263228 MAP2K2P36507 400 aa18.58■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms