RNA–Protein interactions for RNA: ENST00000251775.8

SNX4-201, Transcript of sorting nexin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX4, Length 2,513 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX4-201ENST00000251775 MYO6Q9UM54 1294 aa21.29■■□□□ 1
SNX4-201ENST00000251775 SYF2O95926 243 aaKnown RBP21.28■■□□□ 1
SNX4-201ENST00000251775 SCG2P13521 617 aa21.28■■□□□ 1
SNX4-201ENST00000251775 FILIP1LQ4L180 1135 aa21.28■■□□□ 1
SNX4-201ENST00000251775 DZIP1Q86YF9 867 aaKnown RBP21.28■■□□□ 1
SNX4-201ENST00000251775 TAF1LQ8IZX4 1826 aa21.28■■□□□ 1
SNX4-201ENST00000251775 RNF40O75150 1001 aa21.28■■□□□ 1
SNX4-201ENST00000251775 BMP15O95972 392 aa21.28■■□□□ 1
SNX4-201ENST00000251775 PTGDRQ13258 359 aa21.28■■□□□ 1
SNX4-201ENST00000251775 SMYD4Q8IYR2 804 aaPredicted RBP21.28■■□□□ 1
SNX4-201ENST00000251775 PAGE5Q96GU1 130 aa21.28■■□□□ 1
SNX4-201ENST00000251775 PPP1R3GB7ZBB8 358 aa21.27■■□□□ 1
SNX4-201ENST00000251775 RNF225M0QZC1 329 aaPredicted RBP21.27■■□□□ 1
SNX4-201ENST00000251775 PLEKHA4Q9H4M7 779 aa21.27■■□□□ 1
SNX4-201ENST00000251775 VIPAS39Q9H9C1 493 aa21.27■■□□□ 1
SNX4-201ENST00000251775 ABHD10Q9NUJ1 306 aa21.27■■□□□ 1
SNX4-201ENST00000251775 ANKRD65E5RJM6 399 aa21.27■■□□□ 1
SNX4-201ENST00000251775 PRPF6O94906 941 aaKnown RBP21.27■■□□□ 1
SNX4-201ENST00000251775 AARSP49588 968 aaKnown RBP eCLIP21.27■■□□□ 1
SNX4-201ENST00000251775 NLRP5P59047 1200 aa21.27■■□□□ 1
SNX4-201ENST00000251775 ATP2C1P98194 919 aaPredicted RBP21.27■■□□□ 1
SNX4-201ENST00000251775 PFKFB3Q16875 520 aaPredicted RBP21.27■■□□□ 1
SNX4-201ENST00000251775 SPTY2D1Q68D10 685 aaPredicted RBP21.26■□□□□ 0.99
SNX4-201ENST00000251775 PIK3AP1Q6ZUJ8 805 aa21.26■□□□□ 0.99
SNX4-201ENST00000251775 IL17RBQ9NRM6 502 aa21.26■□□□□ 0.99
SNX4-201ENST00000251775 NHSQ6T4R5 1651 aa21.26■□□□□ 0.99
SNX4-201ENST00000251775 CDC25AP30304 524 aa21.26■□□□□ 0.99
SNX4-201ENST00000251775 TFAP4Q01664 338 aa21.26■□□□□ 0.99
SNX4-201ENST00000251775 C12orf60Q5U649 245 aa21.26■□□□□ 0.99
SNX4-201ENST00000251775 DYNLL2Q96FJ2 89 aa21.26■□□□□ 0.99
SNX4-201ENST00000251775 PPFIA4O75335 1185 aa21.25■□□□□ 0.99
SNX4-201ENST00000251775 CCT6AP40227 531 aaKnown RBP21.25■□□□□ 0.99
SNX4-201ENST00000251775 IRX3P78415 501 aaPredicted RBP21.25■□□□□ 0.99
SNX4-201ENST00000251775 GRIK5Q16478 980 aa21.25■□□□□ 0.99
SNX4-201ENST00000251775 SLF1Q9BQI6 1058 aa21.25■□□□□ 0.99
SNX4-201ENST00000251775 ANKIB1Q9P2G1 1089 aa21.25■□□□□ 0.99
SNX4-201ENST00000251775 GTF2A1P52655 376 aaPredicted RBP21.25■□□□□ 0.99
SNX4-201ENST00000251775 DPYDQ12882 1025 aa21.25■□□□□ 0.99
SNX4-201ENST00000251775 CYP26C1Q6V0L0 522 aa21.25■□□□□ 0.99
SNX4-201ENST00000251775 AFAP1L1Q8TED9 768 aa21.25■□□□□ 0.99
SNX4-201ENST00000251775 SH3RF3Q8TEJ3 882 aaPredicted RBP21.25■□□□□ 0.99
SNX4-201ENST00000251775 PPM1EQ8WY54 764 aa21.25■□□□□ 0.99
SNX4-201ENST00000251775 ZC3H4Q9UPT8 1303 aaKnown RBP21.24■□□□□ 0.99
SNX4-201ENST00000251775 USP14P54578 494 aa21.24■□□□□ 0.99
SNX4-201ENST00000251775 NFIXQ14938 502 aa21.24■□□□□ 0.99
SNX4-201ENST00000251775 TMED8Q6PL24 325 aaPredicted RBP21.24■□□□□ 0.99
SNX4-201ENST00000251775 CCDC148Q8NFR7 591 aa21.24■□□□□ 0.99
SNX4-201ENST00000251775 TOM1O60784 492 aa21.24■□□□□ 0.99
SNX4-201ENST00000251775 LDHBP07195 334 aaKnown RBP21.24■□□□□ 0.99
SNX4-201ENST00000251775 KRT31Q15323 416 aa21.24■□□□□ 0.99
SNX4-201ENST00000251775 DIXDC1Q155Q3 683 aa21.24■□□□□ 0.99
SNX4-201ENST00000251775 IL17AQ16552 155 aa21.24■□□□□ 0.99
SNX4-201ENST00000251775 TRAPPC11Q7Z392 1133 aa21.24■□□□□ 0.99
SNX4-201ENST00000251775 KAT14Q9H8E8 782 aa21.24■□□□□ 0.99
SNX4-201ENST00000251775 JRKLQ9Y4A0 524 aa21.24■□□□□ 0.99
SNX4-201ENST00000251775 COBLO75128 1261 aa21.23■□□□□ 0.99
SNX4-201ENST00000251775 STAG2Q8N3U4 1231 aa21.23■□□□□ 0.99
SNX4-201ENST00000251775 STAMQ92783 540 aa21.23■□□□□ 0.99
SNX4-201ENST00000251775 GPR101Q96P66 508 aaPredicted RBP21.23■□□□□ 0.99
SNX4-201ENST00000251775 HPCAL4Q9UM19 191 aa21.23■□□□□ 0.99
SNX4-201ENST00000251775 KIF5BP33176 963 aa21.23■□□□□ 0.99
SNX4-201ENST00000251775 MCM7P33993 719 aa21.23■□□□□ 0.99
SNX4-201ENST00000251775 GRAPQ13588 217 aa21.23■□□□□ 0.99
SNX4-201ENST00000251775 WDR66Q8TBY9 1149 aa21.23■□□□□ 0.99
SNX4-201ENST00000251775 GRAPLQ8TC17 118 aaPredicted RBP21.23■□□□□ 0.99
SNX4-201ENST00000251775 GSDMAQ96QA5 445 aa21.23■□□□□ 0.99
SNX4-201ENST00000251775 YY1AP1Q9H869 796 aa21.23■□□□□ 0.99
SNX4-201ENST00000251775 RNF216Q9NWF9 866 aaPredicted RBP21.23■□□□□ 0.99
SNX4-201ENST00000251775 TRIM10Q9UDY6 481 aa21.23■□□□□ 0.99
SNX4-201ENST00000251775 LIMA1Q9UHB6 759 aaKnown RBP21.23■□□□□ 0.99
SNX4-201ENST00000251775 REXO2Q9Y3B8 237 aaKnown RBP21.23■□□□□ 0.99
SNX4-201ENST00000251775 LY75O60449 1722 aa21.23■□□□□ 0.99
SNX4-201ENST00000251775 CTNND2Q9UQB3 1225 aa21.22■□□□□ 0.99
SNX4-201ENST00000251775 XDHP47989 1333 aa21.22■□□□□ 0.99
SNX4-201ENST00000251775 N4BP3O15049 544 aa21.22■□□□□ 0.99
SNX4-201ENST00000251775 RFC4P35249 363 aa21.22■□□□□ 0.99
SNX4-201ENST00000251775 TRAPPC10P48553 1259 aa21.22■□□□□ 0.99
SNX4-201ENST00000251775 E2F4Q16254 413 aa21.22■□□□□ 0.99
SNX4-201ENST00000251775 DGKHQ86XP1 1220 aa21.22■□□□□ 0.99
SNX4-201ENST00000251775 PNMA1Q8ND90 353 aa21.22■□□□□ 0.99
SNX4-201ENST00000251775 GPKOWQ92917 476 aaPredicted RBP eCLIP21.22■□□□□ 0.99
SNX4-201ENST00000251775 NUP88Q99567 741 aaPredicted RBP21.22■□□□□ 0.99
SNX4-201ENST00000251775 LEMD3Q9Y2U8 911 aa21.22■□□□□ 0.99
SNX4-201ENST00000251775 FAM205AQ6ZU69 1335 aa21.21■□□□□ 0.99
SNX4-201ENST00000251775 LRRC10BA6NIK2 292 aa21.21■□□□□ 0.99
SNX4-201ENST00000251775 CHP1Q99653 195 aa21.21■□□□□ 0.99
SNX4-201ENST00000251775 VPS16Q9H269 839 aa21.21■□□□□ 0.99
SNX4-201ENST00000251775 HDAC6Q9UBN7 1215 aa21.21■□□□□ 0.99
SNX4-201ENST00000251775 NAV1Q8NEY1 1877 aa21.21■□□□□ 0.99
SNX4-201ENST00000251775 USP17L3A6NCW0 530 aa21.21■□□□□ 0.99
SNX4-201ENST00000251775 USP17L4A6NCW7 530 aa21.21■□□□□ 0.99
SNX4-201ENST00000251775 USP17L1Q7RTZ2 530 aa21.21■□□□□ 0.99
SNX4-201ENST00000251775 FNBP4Q8N3X1 1017 aaPredicted RBP21.21■□□□□ 0.99
SNX4-201ENST00000251775 ANKS1AQ92625 1134 aa21.21■□□□□ 0.99
SNX4-201ENST00000251775 GUCA1BQ9UMX6 200 aa21.21■□□□□ 0.99
SNX4-201ENST00000251775 CPP00450 1065 aa21.2■□□□□ 0.98
SNX4-201ENST00000251775 KRT9P35527 623 aa21.2■□□□□ 0.98
SNX4-201ENST00000251775 COPB1P53618 953 aaKnown RBP21.2■□□□□ 0.98
SNX4-201ENST00000251775 BLIDQ8IZY5 108 aa21.2■□□□□ 0.98
SNX4-201ENST00000251775 RIN2Q8WYP3 895 aaPredicted RBP21.2■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms